Difference between revisions of "CLC genomics server"

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(Introduction)
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==Introduction==
 
==Introduction==
  
The CLC genomics workbench (http://www.clcbio.com/products/clc-genomics-workbench/) is a '''next generation sequencing solution''' that provides numerous features within the fields of genomics, transcriptomics and epigenomics and additionally includes all features of CLC main workbench. Please find further information about the CLC genomics workbench on the [https://sharepoint.biol.ethz.ch/it/clc/SitePages/Home.aspx sharepoint] page of D-BIOL.
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CLC Genomics Server is a software solution for centralized bioinformatics analysis and sharing of data generated from all High-Throughput Sequencing platforms. It contains the same tools as the CLC Genomics Workbench, such as mapping of reads to a known reference, de novo assembly, and variant calling. With a single click within CLC Genomics Workbench it is possible to offload resource-demanding tasks to an HPC cluster, that would not possible to analyse in a desktop computer environment. Please find further information about the CLC genomics workbench on the [https://sharepoint.biol.ethz.ch/it/clc/SitePages/Home.aspx sharepoint] page of D-BIOL.
 
 
You can use the CLC genomics workbench as a stand-alone application, but for calculations that require larger amounts of computational resources, it may reaches its limitations. Therefore Qiagen provides the CLC genomics server, which allows you to '''offload''' your '''resource-demanding tasks''' from the CLC genomics workbench '''to the genomics server''', which runs on the Euler cluster.
 
  
 
==Current version of the server==
 
==Current version of the server==

Revision as of 09:04, 18 August 2016

Introduction

CLC Genomics Server is a software solution for centralized bioinformatics analysis and sharing of data generated from all High-Throughput Sequencing platforms. It contains the same tools as the CLC Genomics Workbench, such as mapping of reads to a known reference, de novo assembly, and variant calling. With a single click within CLC Genomics Workbench it is possible to offload resource-demanding tasks to an HPC cluster, that would not possible to analyse in a desktop computer environment. Please find further information about the CLC genomics workbench on the sharepoint page of D-BIOL.

Current version of the server

7.5.1

Life time

2013-?

Tutorial

Using the CLC genomics service