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| − | As an example for using Cantera, we are creating an object that represents a phase of matter and print out its properties. For this, we are using the Python interface of Cantera and run the script <tt>test.py</tt>.
| + | You can submit a Cantera Python script (test.py) in batch mode with the following command: |
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| − | [leonhard@euler02 ~]$ '''cat test.py''' | + | bsub [LSF options] "python test.py" |
| − | #!/usr/bin/env python
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| − | import cantera as ct
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| − | gas1 = ct.Solution('gri30.xml')
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| − | gas1()
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| − | [leonhard@euler02 ~]$ '''module load legacy gcc/4.8.2 open_mpi/1.6.5 python/2.7.6 boost/1.55.0 matlab/8.2 cantera/2.1.2'''
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| − | Autoloading openblas/0.2.13_seq
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| − | [leonhard@euler02 ~]$ '''bsub -n 1 -W 0:10 -R "rusage[mem=100]" "python test.py"'''
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| − | Generic job.
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| − | Job <35413388> is submitted to queue <normal.4h>.
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| − | [leonhard@euler02 ~]$ '''bjobs'''
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| − | JOBID USER STAT QUEUE FROM_HOST EXEC_HOST JOB_NAME SUBMIT_TIME
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| − | 35413388 leonhard PEND normal.4h euler02 *n test.py Jan 10 14:16
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| − | [leonhard@euler02 ~]$ '''bjobs'''
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| − | JOBID USER STAT QUEUE FROM_HOST EXEC_HOST JOB_NAME SUBMIT_TIME
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| − | 35413388 leonhard RUN normal.4h euler02 e1348 *n test.py Jan 10 14:16
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| − | [leonhard@euler02 ~]$ '''bjobs'''
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| − | No unfinished job found
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| − | [leonhard@euler02 ~]$ '''grep -A 14 gri30 lsf.o35413388'''
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| − | gri30:
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| − | temperature 300 K
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| − | pressure 101325 Pa
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| − | density 0.0818891 kg/m^3
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| − | mean mol. weight 2.01588 amu
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| − | 1 kg 1 kmol
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| − | ----------- ------------
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| − | enthalpy 26470.1 5.336e+04 J
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| − | internal energy -1.21087e+06 -2.441e+06 J
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| − | entropy 64913.9 1.309e+05 J/K
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| − | Gibbs function -1.94477e+07 -3.92e+07 J
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| − | heat capacity c_p 14311.8 2.885e+04 J/K
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| − | heat capacity c_v 10187.3 2.054e+04 J/K
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| − | The resource usage summary of the job can be found in the LSF log file.
| + | Here you need to replace ''[LSF options]'' with LSF parameters for the resource requirements of the job. Please find a documentation about the parameters of <tt>bsub</tt> on the wiki page about the [[Using_the_batch_system|batch system]]. |
Latest revision as of 13:23, 10 January 2017
You can submit a Cantera Python script (test.py) in batch mode with the following command:
bsub [LSF options] "python test.py"
Here you need to replace [LSF options] with LSF parameters for the resource requirements of the job. Please find a documentation about the parameters of bsub on the wiki page about the batch system.
