Difference between revisions of "Hall of fame"

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==Summary==
 
==Summary==
The summary lists the total number of scientific publications that reference the HPC clusters (Euler, Leonhard, Brutus) since 2008. Publications that are referencing more than one cluster are only counted once.
+
The summary lists the total number of scientific publications that reference the HPC clusters (Euler, Leonhard, Brutus) or the HPC group since 2008. Publications that are referencing more than one cluster are only counted once.
  
 
{| class="wikitable" border="1" style="width:50%;text-align:center;"
 
{| class="wikitable" border="1" style="width:50%;text-align:center;"
 
! Articles in scientific journals !! Theses !! Total
 
! Articles in scientific journals !! Theses !! Total
 
|-
 
|-
| style="width:50%;" | 822 || 253 || 1075
+
| style="width:50%;" | 893 || 274 || 1167
 
|}
 
|}
  
 +
Please find below graphs showing the number of journal articles per year for each cluster and the number of theses per year.
  
Publications that reference more than one cluster were only counted once in the summary.
+
<table>
 +
<tr>
 +
  <td style="width: 330px;">'''Euler:'''</td>
 +
  <td style="width: 330px;">'''Leonhard Open:'''</td>
 +
  <td style="width: 330px;">'''Brutus:'''</td>
 +
</tr>
 +
<tr>
 +
  <td>
 +
{{Graph:BarChart2|width=300|height=200|color="rgb(102,138,255)"|values= [
 +
        {"x": "2022", "y": 63},
 +
        {"x": "2021", "y": 88},
 +
        {"x": "2020", "y": 77},
 +
        {"x": "2019", "y": 72},
 +
        {"x": "2018", "y": 55},
 +
        {"x": "2017", "y": 34},
 +
        {"x": "2016", "y": 20},
 +
        {"x": "2015", "y":  3},
 +
        {"x": "2014", "y":  1},
 +
        {"x": "2013", "y":  0},
 +
        {"x": "2012", "y":  0},
 +
        {"x": "2011", "y":  0},
 +
        {"x": "2010", "y":  0},
 +
        {"x": "2009", "y":  0},
 +
        {"x": "2008", "y":  0},
 +
]
 +
}}
 +
</td>
 +
<td>
 +
{{Graph:BarChart2|width=300|height=200|color="rgb(102,138,255)"|values= [
 +
        {"x": "2022", "y": 1},
 +
        {"x": "2021", "y": 6},
 +
        {"x": "2020", "y": 8},
 +
        {"x": "2019", "y": 4},
 +
        {"x": "2018", "y": 1},
 +
        {"x": "2017", "y": 0},
 +
        {"x": "2016", "y": 0},
 +
        {"x": "2015", "y": 0},
 +
        {"x": "2014", "y": 0},
 +
        {"x": "2013", "y": 0},
 +
        {"x": "2012", "y": 0},
 +
        {"x": "2011", "y": 0},
 +
        {"x": "2010", "y": 0},
 +
        {"x": "2009", "y": 0},
 +
        {"x": "2008", "y": 0},
 +
]
 +
}}
 +
</td>
 +
<td>
 +
{{Graph:BarChart2|width=300|height=200|color="rgb(102,138,255)"|values= [
 +
        {"x": "2022", "y":  0},
 +
        {"x": "2021", "y":  2},
 +
        {"x": "2020", "y":  6},
 +
        {"x": "2019", "y":  9},
 +
        {"x": "2018", "y": 13},
 +
        {"x": "2017", "y": 31},
 +
        {"x": "2016", "y": 46},
 +
        {"x": "2015", "y": 66},
 +
        {"x": "2014", "y": 62},
 +
        {"x": "2013", "y": 63},
 +
        {"x": "2012", "y": 62},
 +
        {"x": "2011", "y": 62},
 +
        {"x": "2010", "y": 31},
 +
        {"x": "2009", "y": 16},
 +
        {"x": "2008", "y":  5},
 +
]
 +
}}
 +
</td>
 +
</tr>
 +
</table>
 +
<table>
 +
<tr>
 +
<td style="width: 330px;">'''HPC team (no cluster specified):'''</td>
 +
<td style="width: 330px;">'''Total (journal articles):'''</td>
 +
<td style="width: 330px;">'''Total (theses):'''</td>
 +
</tr>
 +
<tr>
 +
<td>
 +
{{Graph:BarChart2|width=300|height=200|color="rgb(102,138,255)"|values= [
 +
        {"x": "2022", "y": 5},
 +
        {"x": "2021", "y": 3},
 +
        {"x": "2020", "y": 1},
 +
        {"x": "2019", "y": 3},
 +
        {"x": "2018", "y": 2},
 +
        {"x": "2017", "y": 0},
 +
        {"x": "2016", "y": 1},
 +
        {"x": "2015", "y": 0},
 +
        {"x": "2014", "y": 0},
 +
        {"x": "2013", "y": 1},
 +
        {"x": "2012", "y": 2},
 +
        {"x": "2011", "y": 5},
 +
        {"x": "2010", "y": 3},
 +
        {"x": "2009", "y": 0},
 +
        {"x": "2008", "y": 1},
 +
]
 +
}}
 +
</td>
 +
<td>
 +
{{Graph:BarChart2|width=300|height=200|color="rgb(102,138,255)"|values= [
 +
        {"x": "2022", "y": 68},
 +
        {"x": "2021", "y": 97},
 +
        {"x": "2020", "y": 85},
 +
        {"x": "2019", "y": 82},
 +
        {"x": "2018", "y": 65},
 +
        {"x": "2017", "y": 52},
 +
        {"x": "2016", "y": 62},
 +
        {"x": "2015", "y": 68},
 +
        {"x": "2014", "y": 63},
 +
        {"x": "2013", "y": 64},
 +
        {"x": "2012", "y": 64},
 +
        {"x": "2011", "y": 67},
 +
        {"x": "2010", "y": 34},
 +
        {"x": "2009", "y": 16},
 +
        {"x": "2008", "y":  6},
 +
]
 +
}}
 +
</td>
 +
<td>
 +
{{Graph:BarChart2|width=300|height=200|color="rgb(102,138,255)"|values= [
 +
        {"x": "2022", "y": 11},
 +
        {"x": "2021", "y": 38},
 +
        {"x": "2020", "y": 25},
 +
        {"x": "2019", "y": 34},
 +
        {"x": "2018", "y": 29},
 +
        {"x": "2017", "y": 26},
 +
        {"x": "2016", "y": 21},
 +
        {"x": "2015", "y": 24},
 +
        {"x": "2014", "y": 18},
 +
        {"x": "2013", "y": 16},
 +
        {"x": "2012", "y": 13},
 +
        {"x": "2011", "y":  7},
 +
        {"x": "2010", "y":  9},
 +
        {"x": "2009", "y":  3},
 +
        {"x": "2008", "y":  0},
 +
]
 +
}}
 +
</td>
 +
</tr>
 +
</table>
 +
<table>
 +
<tr>
 +
<td style="width: 330px;">'''Total (articles+theses):'''</td>
 +
</tr>
 +
<tr>
 +
<td>
 +
{{Graph:BarChart2|width=300|height=200|color="rgb(102,138,255)"|values= [
 +
        {"x": "2022", "y":  79},
 +
        {"x": "2021", "y": 135},
 +
        {"x": "2020", "y": 110},
 +
        {"x": "2019", "y": 116},
 +
        {"x": "2018", "y":  94},
 +
        {"x": "2017", "y":  78},
 +
        {"x": "2016", "y":  83},
 +
        {"x": "2015", "y":  92},
 +
        {"x": "2014", "y":  81},
 +
        {"x": "2013", "y":  80},
 +
        {"x": "2012", "y":  77},
 +
        {"x": "2011", "y":  74},
 +
        {"x": "2010", "y":  43},
 +
        {"x": "2009", "y":  19},
 +
        {"x": "2008", "y":  6},
 +
]
 +
}}
 +
</td>
 +
</tr>
 +
</table>
  
 
==Publications referencing the Euler cluster (2014-now) sorted by year==
 
==Publications referencing the Euler cluster (2014-now) sorted by year==
 
===2022===
 
===2022===
 +
* Bacci, M., Dal Molin, M., Fenicia, F., Reichert, P., Šukys, J., Application of Stochastic Time Dependent Parameters to Improve the Characterization of Uncertainty in Conceptual Hydrological Models, ''J. Hydrol'', '''612, Part A''', 128057, (2022), https://doi.org/10.1016/j.jhydrol.2022.128057
 +
 +
* Balázs, A., Faccenna, C., Gerya, T., Ueda, K., Funiciello, F., The Dynamics of Forearc – Back-Arc Basin Subsidence Numerical Models and Observations From Mediterranean Subduction Zones, ''Tectonics'', '''41''', e2021TC007078, (2022), https://doi.org/10.1029/2021TC007078
 +
 +
* Barros, M., Walker, A., Stanković, T., Computational Design of an Additively Manufactured Origami-Based Hand Orthosis, ''Proc. Design Soc.'', '''2''', (2022), 1231-1242, https://doi.org/10.1017/pds.2022.125
 +
 
* Baumann, K.B.L, Thoma, R., Callbeck, C.M., Niederdorfer, R., Schuber, C.J., Müller, B., Lever, M.A., Bürgmann, H., Microbial Nitrogen Transformation Potential in Sediments of Two Contrasting Lakes Is Spatially Structured but Seasonally Stable, ''mSphere'', '''7(1)''', e01013-21, (2022), https://doi.org/10.1128/msphere.01013-21
 
* Baumann, K.B.L, Thoma, R., Callbeck, C.M., Niederdorfer, R., Schuber, C.J., Müller, B., Lever, M.A., Bürgmann, H., Microbial Nitrogen Transformation Potential in Sediments of Two Contrasting Lakes Is Spatially Structured but Seasonally Stable, ''mSphere'', '''7(1)''', e01013-21, (2022), https://doi.org/10.1128/msphere.01013-21
  
 
* Bhowal, S., Collins, S.P., Spaldin, N.A., Hidden '''''k'''''-Space Magnetoelectric Multipoles in Nonmagnetic Ferroelectrics, ''Phys. Rev. Lett.'', '''128''', 116402, (2022), https://doi.org/10.1103/PhysRevLett.128.116402
 
* Bhowal, S., Collins, S.P., Spaldin, N.A., Hidden '''''k'''''-Space Magnetoelectric Multipoles in Nonmagnetic Ferroelectrics, ''Phys. Rev. Lett.'', '''128''', 116402, (2022), https://doi.org/10.1103/PhysRevLett.128.116402
 +
 +
* Bhowal, S., O'Neill D., Fechner, M., Spaldin, N.A., Staub, U., Duffy, J., Collins, S.P., Anti-symmetric Compton Scattering in LiNiPO<sub>4</sub>: Towards a Direct Probe of the Magneto-Electric Multipole Moment, ''Open Res. Europe'', '''1''', 132, (2022), https://doi.org/10.12688/openreseurope.13863.2
 +
 +
* Bhowal, S., Spaldin, N.A., Magnetoelectric Classification of Skyrmions, ''Phys. Rev. Lett.'', '''128''', 227204, (2022), https://doi.org/10.1103/PhysRevLett.128.227204
  
 
* Bissig, F., Khan, A., Giardini, D., Evidence for Basalt Enrichment in the Mantle Transition Zone from Inversion of Triplicated P- and S-Waveforms, ''Earth Planet. Sci. Lett.'', '''580''', 117387, (2022), https://doi.org/10.1016/j.epsl.2022.117387
 
* Bissig, F., Khan, A., Giardini, D., Evidence for Basalt Enrichment in the Mantle Transition Zone from Inversion of Triplicated P- and S-Waveforms, ''Earth Planet. Sci. Lett.'', '''580''', 117387, (2022), https://doi.org/10.1016/j.epsl.2022.117387
 +
 +
* Bortis, A., Trassin, M., Fiebig, M., Lottermoser, Th., Manipulation of Charged Domain Walls in Geometric Improper Ferroelectric Thin Films: A Phase-Field Study, ''Phys. Rev. Mat.'', '''6''', 064403, (2022), https://doi.org/10.1103/PhysRevMaterials.6.064403
  
 
* Breunung, Th., Asymptotic Stability of Quasi-Periodic Orbits, ''Proc. R. Soc. A'', '''478''', 20210787, (2022), https://doi.org/10.1098/rspa.2021.0787
 
* Breunung, Th., Asymptotic Stability of Quasi-Periodic Orbits, ''Proc. R. Soc. A'', '''478''', 20210787, (2022), https://doi.org/10.1098/rspa.2021.0787
Line 43: Line 220:
  
 
* Delli Compagni, R., Cheng, Zh., Russo, S., Van Boeckel, T.P., A Hybrid Neural Network-SEIR Model for Forecasting Intensive Care Occupancy in Switzerland During COVID-19 Epidemics, ''PLoS ONE'', '''17(3)''', e0263789, (2022), https://doi.org/10.1371/journal.pone.0263789
 
* Delli Compagni, R., Cheng, Zh., Russo, S., Van Boeckel, T.P., A Hybrid Neural Network-SEIR Model for Forecasting Intensive Care Occupancy in Switzerland During COVID-19 Epidemics, ''PLoS ONE'', '''17(3)''', e0263789, (2022), https://doi.org/10.1371/journal.pone.0263789
 +
 +
* Desmet, F., Gruber, N., Köhn, E.E., Münnich, M., Vogt, M., Tracking the Space-Time Evolution of Ocean Acidification Extremes in the California Current System and Northeast Pacific, ''J. Geophys. Res. Oceans'', '''127''', e2021JC018159, (2022), https://doi.org/10.1029/2021JC018159
 +
 +
* Dessauges, C., Mikelson, J., Dobrzyński, M., Jacques, M.-A., Frismantiene, A., Gagliardi, P.A., Khammash, M., Pertz, O., Optogenetic Actuator – ERK Biosensor Circuits Identify MAPK Network Nodes That Shape ERK Dynamics, ''Mol. Syst. Biol.'', '''18''', e10670, (2022), https://doi.org/10.15252/msb.202110670
  
 
* du Pasquier, C., Shea, K., Validation of a Nonlinear Force Method for Large Deformations in Shape-Morphing Structures, ''Struct. Multidiscip. O.'', '''65''', 87, (2022), https://doi.org/10.1007/s00158-022-03187-z
 
* du Pasquier, C., Shea, K., Validation of a Nonlinear Force Method for Large Deformations in Shape-Morphing Structures, ''Struct. Multidiscip. O.'', '''65''', 87, (2022), https://doi.org/10.1007/s00158-022-03187-z
 +
 +
* Eyring, N., Kittner, N., High-Resolution Electricity Generation Model Demonstrates Suitability of High-Altitude Floating Solar Power, ''iScience'', '''25(6)''', 104394, (2022), https://doi.org/10.1016/j.isci.2022.104394
  
 
* Fei, F., Jenny, P., A High-Order Unified Stochastic Particle Method Based on the Bhatnagar-Gross-Krook Model for Multi-Scale Gas Flows, ''Comput. Phys. Commun.'', '''274''', 108303, (2022), https://doi.org/10.1016/j.cpc.2022.108303
 
* Fei, F., Jenny, P., A High-Order Unified Stochastic Particle Method Based on the Bhatnagar-Gross-Krook Model for Multi-Scale Gas Flows, ''Comput. Phys. Commun.'', '''274''', 108303, (2022), https://doi.org/10.1016/j.cpc.2022.108303
 +
 +
* Fluri, J., Kacprzak, T., Lucchi, A., Schneider, A., Refregier, A., Hofmann, Th., Full '''''w''''' '''CDM''' Analysis of KiDS-1000 Weak Lensing Maps Using Deep Learning, ''Phys. Rev. D'', '''105''', 083518, (2022), https://doi.org/10.1103/PhysRevD.105.083518
  
 
* Gadeyne, T., Zhang, P., Schild, A., Wörner, H.J., Low-Energy Electron Distributions from the Photoionization of Liquid Water: a Sensitive Test of Electron Mean Free Paths, ''Chem. Sci.'', '''13''', (2022), 1675-1692, https://doi.org/10.1039/D1SC06741A
 
* Gadeyne, T., Zhang, P., Schild, A., Wörner, H.J., Low-Energy Electron Distributions from the Photoionization of Liquid Water: a Sensitive Test of Electron Mean Free Paths, ''Chem. Sci.'', '''13''', (2022), 1675-1692, https://doi.org/10.1039/D1SC06741A
 +
 +
* Gerken, L.R.H., Gogos, A., Starsich, F.H.L., David, H., Gerdes, M.E., Schiefer, H., Psoroulas, S., Meer, D., Plasswilmk, L., Weber, D.C., Herrmann, I.K., Catalytic Activity Imperative for Nanoparticle Dose Enhancement in Photon and Proton Therapy, ''Nat. Commun.'', '''13''', 3248, (2022), https://doi.org/10.1038/s41467-022-30982-5
  
 
* Gjorgiev, B., David, A.E., Sansavini, G., Cascade-Risk-Informed Transmission Expansion Planning of AC Electric Power Systems, ''Electr. Pow. Syst. Res.'', '''204''', 107685, (2022), https://doi.org/10.1016/j.epsr.2021.107685
 
* Gjorgiev, B., David, A.E., Sansavini, G., Cascade-Risk-Informed Transmission Expansion Planning of AC Electric Power Systems, ''Electr. Pow. Syst. Res.'', '''204''', 107685, (2022), https://doi.org/10.1016/j.epsr.2021.107685
Line 58: Line 245:
 
* Gschwendtner, Ch., Krauss, K., Coupling Transport and Electricity: How Can Vehicle-To-Grid Boost the Attractiveness of Carsharing?, ''Transport. Res. D'', '''106''', 103261, (2022), https://doi.org/10.1016/j.trd.2022.103261
 
* Gschwendtner, Ch., Krauss, K., Coupling Transport and Electricity: How Can Vehicle-To-Grid Boost the Attractiveness of Carsharing?, ''Transport. Res. D'', '''106''', 103261, (2022), https://doi.org/10.1016/j.trd.2022.103261
  
* Izardar, A., Ederer, C., Impact of Chemical Disorder on Magnetic Exchange Interactions in '''''L''''''''1<sub>0</sub>−FeNi''', ''Phys. Rev. B'', '''105''', 134428, (2022), https://doi.org/10.1103/PhysRevB.105.134428
+
* Invernizzi, M., Parrinello, M., Exploration vs Convergence Speed in Adaptive-Bias Enhanced Sampling, ''J. Chem. Theory Comput.'', '''18(6)''', (2022), 3988-3996, https://doi.org/10.1021/acs.jctc.2c00152
 +
 
 +
* Izardar, A., Ederer, C., Impact of Chemical Disorder on Magnetic Exchange Interactions in '''''L''''' '''1<sub>0</sub>−FeNi''', ''Phys. Rev. B'', '''105''', 134428, (2022), https://doi.org/10.1103/PhysRevB.105.134428
  
 
* Jain, Sh., Haller, G., How to Compute Invariant Manifolds and Their Reduced Dynamics in High-Dimensional Finite Element Models, ''Nonlinear Dyn.'', '''107''', (2022), 1417-1450, https://doi.org/10.1007/s11071-021-06957-4
 
* Jain, Sh., Haller, G., How to Compute Invariant Manifolds and Their Reduced Dynamics in High-Dimensional Finite Element Models, ''Nonlinear Dyn.'', '''107''', (2022), 1417-1450, https://doi.org/10.1007/s11071-021-06957-4
  
 
* Kagho, G.O., Meli, J., Walser, D., Balac, M., Effects of Population Sampling on Agent-Based Transport Simulation of On-Demand Services, ''Procedia Comput. Sci.'', '''201''', (2022), 305-312, https://doi.org/10.1016/j.procs.2022.03.041
 
* Kagho, G.O., Meli, J., Walser, D., Balac, M., Effects of Population Sampling on Agent-Based Transport Simulation of On-Demand Services, ''Procedia Comput. Sci.'', '''201''', (2022), 305-312, https://doi.org/10.1016/j.procs.2022.03.041
 +
 +
* Karagodin, A., Rozanov, E., Mironova, I., On the Possibility of Modeling the IMF B<sub>y</sub>-Weather Coupling through GEC-Related Effects on Cloud Droplet Coalescence Rate, ''Atmosphere'', '''13(6)''', 881, (2022), https://doi.org/10.3390/atmos13060881
  
 
* Kariso, P., Suffer, F., Mikaberidze, A., Measuring Splash Dispersal of a Major Wheat Pathogen in the Field, ''PhytoFrontiers'', '''2(1)''', (2022), 30-40, https://doi.org/10.1094/PHYTOFR-05-21-0039-R
 
* Kariso, P., Suffer, F., Mikaberidze, A., Measuring Splash Dispersal of a Major Wheat Pathogen in the Field, ''PhytoFrontiers'', '''2(1)''', (2022), 30-40, https://doi.org/10.1094/PHYTOFR-05-21-0039-R
 +
 +
* Kiani Shahvandi, M. Soja, B., Inclusion of Data Uncertainty in Machine Learning and Its Application in Geodetic Data Science, With Case Studies for the Prediction of Earth Orientation Parameters and GNSS Station Coordinate Time Series, ''Adv. Space Res.'', '''70(3)''', (2022), 563-575, https://doi.org/10.1016/j.asr.2022.05.042
  
 
* Kim, D., Efe, I., Torlakcik, H., Terzopoulou, A., Veciana, A., Siringil, E., Mushtaq, F., Franco, C., von Arx, D., Sevim, S., Puigmarti-Luis, J., Nelson, B., Spaldin, N.A., Gattinoni, Ch., Chen, X.-Zh., Pané, S., Magnetoelectric Effect in Hydrogen Harvesting: Magnetic Field as a Trigger of Catalytic Reactions, ''Adv. Mater.'', '''2022''', 2110612, (2022), https://doi.org/10.1002/adma.202110612
 
* Kim, D., Efe, I., Torlakcik, H., Terzopoulou, A., Veciana, A., Siringil, E., Mushtaq, F., Franco, C., von Arx, D., Sevim, S., Puigmarti-Luis, J., Nelson, B., Spaldin, N.A., Gattinoni, Ch., Chen, X.-Zh., Pané, S., Magnetoelectric Effect in Hydrogen Harvesting: Magnetic Field as a Trigger of Catalytic Reactions, ''Adv. Mater.'', '''2022''', 2110612, (2022), https://doi.org/10.1002/adma.202110612
 +
 +
* Köhn, E.E., Münnich, M., Vogt, M., Desmet, F., Gruber, N., Strong Habitat Compression by Extreme Shoaling Events of Hypoxic Waters in the Eastern Pacific, ''J. Geophys. Res. Oceans'', '''127(6)''', e2022JC018429, (2022), https://doi.org/10.1029/2022JC018429
  
 
* Krauss, K., Krail, M., Axhausen, K.W.,  What Drives the Utility of Shared Transport Services for Urban Travellers? A Stated Preference Survey in German Cities, ''Travel, behaviour & society'', '''26''', (2022), 206-220, https://doi.org/10.1016/j.tbs.2021.09.010
 
* Krauss, K., Krail, M., Axhausen, K.W.,  What Drives the Utility of Shared Transport Services for Urban Travellers? A Stated Preference Survey in German Cities, ''Travel, behaviour & society'', '''26''', (2022), 206-220, https://doi.org/10.1016/j.tbs.2021.09.010
Line 81: Line 276:
  
 
* Mittelviefhaus, M., Georges, G., Boulouchos, K., Electrification of Multi-Energy Hubs Under Limited Electricity Supply: De-/Centralized Investment and Operation for Cost-Effective Greenhouse Gas Mitigation, ''Adv. Appl. Energ.'', '''5''', 100083, (2022), https://doi.org/10.1016/j.adapen.2022.100083
 
* Mittelviefhaus, M., Georges, G., Boulouchos, K., Electrification of Multi-Energy Hubs Under Limited Electricity Supply: De-/Centralized Investment and Operation for Cost-Effective Greenhouse Gas Mitigation, ''Adv. Appl. Energ.'', '''5''', 100083, (2022), https://doi.org/10.1016/j.adapen.2022.100083
 +
 +
* Moser, B., Lorenz, C.S., Schmitt, U., Réfrégier, A., Fluri, J., Sgier, R., Tarsitano, F., Heisenberg, L., Symbolic Implementation of Extensions of the PyCosmo Boltzmann Solver, ''Astron. Comput.'', '''40''', 100603, (2022), https://doi.org/10.1016/j.ascom.2022.100603
 +
 +
* Munch, J., Ueada, K., Schnydrig, St., May, D.A., Gerya, T., Contrasting Influence of Sediments vs Surface Processes on Retreating Subduction Zones Dynamics, ''Tectonophysics'', '''836''', 229410, https://doi.org/10.1016/j.tecto.2022.229410
  
 
* Myung, Ch.W., Hirshberg, B., Parrinello, M., Prediction of a Supersolid Phase in High-Pressure Deuterium, ''Phys. Rev. Lett.'', '''128''', 045301, (2022), https://doi.org/10.1103/PhysRevLett.128.045301
 
* Myung, Ch.W., Hirshberg, B., Parrinello, M., Prediction of a Supersolid Phase in High-Pressure Deuterium, ''Phys. Rev. Lett.'', '''128''', 045301, (2022), https://doi.org/10.1103/PhysRevLett.128.045301
  
 
* Narayanan, H., Cruz Bournazou, M.N., Gosálbez, G.G., Butté, A., Functional-Hybrid Modeling through Automated Adaptive Symbolic Regression for Interpretable Mathematical Expressions, ''Chem. Eng. J.'', '''430''', 133032, (2022), https://doi.org/10.1016/j.cej.2021.133032
 
* Narayanan, H., Cruz Bournazou, M.N., Gosálbez, G.G., Butté, A., Functional-Hybrid Modeling through Automated Adaptive Symbolic Regression for Interpretable Mathematical Expressions, ''Chem. Eng. J.'', '''430''', 133032, (2022), https://doi.org/10.1016/j.cej.2021.133032
 +
 +
* Niederdorfer, R., Fragner, L., Yuan, L., Hausherr, D., Wei, J., Magyar, P., Joss, A., Lehmann, M.F., Ju, F., Bürgmann, H., Distinct Growth Stages Controlled by the Interplay of Deterministic and Stochastic Processes in Functional Anammox Biofilms, ''Water Res.'', '''200''', 117225, (2021), https://doi.org/10.1016/j.watres.2021.117225
  
 
* Petkov, I., Mavromatidis, G., Knoeri, Ch., Allan, J., Hoffmann, V.H., Mangoret: An Optimization Framework for the Long-Term Investment Planning of Building Multi-Energy System and Envelope Retrofits, ''Appl. Energ.'', '''314''', 118901, (2022), https://doi.org/10.1016/j.apenergy.2022.118901
 
* Petkov, I., Mavromatidis, G., Knoeri, Ch., Allan, J., Hoffmann, V.H., Mangoret: An Optimization Framework for the Long-Term Investment Planning of Building Multi-Energy System and Envelope Retrofits, ''Appl. Energ.'', '''314''', 118901, (2022), https://doi.org/10.1016/j.apenergy.2022.118901
 +
 +
* Pickering, B., Lombardi, F., Pfenninger, S., Diversity of Options To Eliminate Fossil Fuels and Reach Carbon Neutrality Across the Entire European Energy System, ''Joule'', '''6(6)''', (2022), 1253-1276, https://doi.org/10.1016/j.joule.2022.05.009
  
 
* Ries, B., Normak, K., Weiss, R.G., Rieder, S., Barros, E.P., Champion, C., König, G., Riniker, S., Relative Free-Energy Calculations for Scaffold Hopping-Type Transformations with an Automated RE-EDS Sampling Procedure, ''J. Comput. Aided Mol. Des.'', '''36''', (2022), 117-130, https://doi.org/10.1007/s10822-021-00436-z<br /><font size=1>(article does not explicitly mention the Euler cluster but the author B. Ries informed us that the cluster was used for this work)</font>
 
* Ries, B., Normak, K., Weiss, R.G., Rieder, S., Barros, E.P., Champion, C., König, G., Riniker, S., Relative Free-Energy Calculations for Scaffold Hopping-Type Transformations with an Automated RE-EDS Sampling Procedure, ''J. Comput. Aided Mol. Des.'', '''36''', (2022), 117-130, https://doi.org/10.1007/s10822-021-00436-z<br /><font size=1>(article does not explicitly mention the Euler cluster but the author B. Ries informed us that the cluster was used for this work)</font>
Line 92: Line 295:
 
* Ries, B., Rieder, S., Rhiner, C., Hünenberger, Ph.H., Riniker, S., RestraintMaker: A Graph-Based Approach to Select Distance Restraints in Free-Energy Calculations with Dual Topology,''J. Comput. Aided Mol. Des.'', (2022), https://doi.org/10.1007/s10822-022-00445-6<br /><font size=1>(article does not explicitly mention the Euler cluster but the author B. Ries informed us that the cluster was used for this work)</font>
 
* Ries, B., Rieder, S., Rhiner, C., Hünenberger, Ph.H., Riniker, S., RestraintMaker: A Graph-Based Approach to Select Distance Restraints in Free-Energy Calculations with Dual Topology,''J. Comput. Aided Mol. Des.'', (2022), https://doi.org/10.1007/s10822-022-00445-6<br /><font size=1>(article does not explicitly mention the Euler cluster but the author B. Ries informed us that the cluster was used for this work)</font>
  
* Rosa-Medina, R., Ferri, F., Finger, F., Dogra, N., Kroeger, K., Lin, R., Chitra, R., Donner, T., Esslinger, T., ''Phys. Rev. Lett.'', '''128''', 143602, (2022), https://doi.org/10.1103/PhysRevLett.128.143602
+
* Rosa-Medina, R., Ferri, F., Finger, F., Dogra, N., Kroeger, K., Lin, R., Chitra, R., Donner, T., Esslinger, T., Observing Dynamical Currents in a Non-Hermitian Momentum Lattice, ''Phys. Rev. Lett.'', '''128''', 143602, (2022), https://doi.org/10.1103/PhysRevLett.128.143602
  
 
* Sabia, C., Buffo, A., Casalini, T., Marchisio, D.L., Barbato, M.C., Storti, G., FBR for Polyolefin Production in Gas Phase: Validation of a Two-Phase Compartmentalized Model by Comparison with CFD, ''Macromol. React. Eng.'', '''2022''', 2100058, (2022),  https://doi.org/10.1002/mren.202100058
 
* Sabia, C., Buffo, A., Casalini, T., Marchisio, D.L., Barbato, M.C., Storti, G., FBR for Polyolefin Production in Gas Phase: Validation of a Two-Phase Compartmentalized Model by Comparison with CFD, ''Macromol. React. Eng.'', '''2022''', 2100058, (2022),  https://doi.org/10.1002/mren.202100058
  
 
* Sayed, M.A., Dehbi, A., Niceno, B., Mikityuk, K., Particle Subgrid Scale Modeling in Hybrid RANS/LES of Turbulent Channel Flow at Low to Moderate Reynolds Number, ''Powder Technol.'', '''397''', 117013, (2022), https://doi.org/10.1016/j.powtec.2021.11.057
 
* Sayed, M.A., Dehbi, A., Niceno, B., Mikityuk, K., Particle Subgrid Scale Modeling in Hybrid RANS/LES of Turbulent Channel Flow at Low to Moderate Reynolds Number, ''Powder Technol.'', '''397''', 117013, (2022), https://doi.org/10.1016/j.powtec.2021.11.057
 +
 +
* Schemm, S., Papritz, L., Rivière, G., Storm Track Response to Uniform Global Warming Downstream of an Idealized Sea Surface Temperature Front, ''Weather Clim. Dynam.'', '''3''', (2022), 601-623, https://doi.org/10.5194/wcd-3-601-2022
 +
 +
* Schmid, B., Becker, F., Molloy, J., Axhausen, K., Lüdering, J., Hagen, J., Blome, A., Modeling Train Route Decisions During Track Works, ''J. Rail Transp. Plan. Manag.'', '''22''', 100320, (2022), https://doi.org/10.1016/j.jrtpm.2022.100320
 +
 +
* Sinha, T., Enriching Problem-Solving Followed by Instruction With Explanatory Accounts of Emotions, ''J. Learn. Sci.'', '''31''', (2022), 151-198, https://doi.org/10.1080/10508406.2021.1964506
  
 
* Szulágyi, J., Binkert, F., Surville, C., Meridional Circulation of Dust and Gas in the Circumstellar Disk: Delivery of Solids onto the Circumplanetary Region, ''ApJ'', '''924''', 1, (2022), https://doi.org/10.3847/1538-4357/ac32d1
 
* Szulágyi, J., Binkert, F., Surville, C., Meridional Circulation of Dust and Gas in the Circumstellar Disk: Delivery of Solids onto the Circumplanetary Region, ''ApJ'', '''924''', 1, (2022), https://doi.org/10.3847/1538-4357/ac32d1
 +
 +
* Tagliavini, G., Khan, M.H., McCorquodale, M., Westbrook, Ch., Holzner, M., Wake Characteristics of Complex-Shaped Snow Particles: Comparison of Numerical Simulations With Fixed Snowflakes to Time-Resolved Particle Tracking Velocimetry Experiments With Free-Falling Analogs, ''Phys. Fluids'', '''34''', 055112, (2022), https://doi.org/10.1063/5.0089759
  
 
* Thürlemann, M., Böselt, L., Riniker, S., Learning Atomic Multipoles: Prediction of the Electrostatic Potential with Equivariant Graph Neural Networks, ''J. Chem. Theory Comput.'', '''18(3)''', (2022), 1701-1710, https://doi.org/10.1021/acs.jctc.1c01021
 
* Thürlemann, M., Böselt, L., Riniker, S., Learning Atomic Multipoles: Prediction of the Electrostatic Potential with Equivariant Graph Neural Networks, ''J. Chem. Theory Comput.'', '''18(3)''', (2022), 1701-1710, https://doi.org/10.1021/acs.jctc.1c01021
 +
 +
* Voulpiotis, K., Schär, S., Frangi, A., Quantifying Robustness in Tall Timber Buildings: A Case Study, ''Eng. Struct.'', '''265''', 114427, (2022), https://doi.org/10.1016/j.engstruct.2022.114427
  
 
* Yang, M., Bonati, L., Polino, D., Parrinello, M., Using Metadynamics to Build Neural Network Potentials for Reactive Events: The Case of Urea Decomposition in Water, ''Catal. Today'','''387''', (2022), 143-149, https://doi.org/10.1016/j.cattod.2021.03.018
 
* Yang, M., Bonati, L., Polino, D., Parrinello, M., Using Metadynamics to Build Neural Network Potentials for Reactive Events: The Case of Urea Decomposition in Water, ''Catal. Today'','''387''', (2022), 143-149, https://doi.org/10.1016/j.cattod.2021.03.018
 +
 +
* Yakimov, A.V., Ravi, M., Verel, R., Sushkevich, V.L., van Bokhoven, J.A., Copéret, Ch., Structure and Framework Association of Lewis Acid Sites in MOR Zeolite, ''J. Am. Chem. Soc.'', '''144''', (2022), 10377-10385, https://doi.org/10.1021/jacs.2c02212
  
 
===2021===
 
===2021===
Line 111: Line 326:
 
* Bhopalam, S., Perumal, D.A., Yadav, A.K., Computational Appraisal of Fluid Flow Behavior in Two-Sided Oscillating Lid-Driven Cavities, ''Int. J. Mech. Sci.'', '''196''', 106303, (2021), https://doi.org/10.1016/j.ijmecsci.2021.106303
 
* Bhopalam, S., Perumal, D.A., Yadav, A.K., Computational Appraisal of Fluid Flow Behavior in Two-Sided Oscillating Lid-Driven Cavities, ''Int. J. Mech. Sci.'', '''196''', 106303, (2021), https://doi.org/10.1016/j.ijmecsci.2021.106303
  
* Bhowal, S., O'Neill, D., Fechner, M., Spaldin, N.A., Staub, U., Duffy, J., Collins, S.P., Anti-Symmetric Compton Scattering in LiNiPO<sub>4</sub>: Towards a Direct Probe of the Magneto-Electric Multipole Moment, ''Open Res. Europe'', '''2021''', 1:134, (2021), https://doi.org/10.12688/openreseurope.13863.1
+
* Bhowal, S., O'Neill, D., Fechner, M., Spaldin, N.A., Staub, U., Duffy, J., Collins, S.P., Anti-Symmetric Compton Scattering in LiNiPO<sub>4</sub>: Towards a Direct Probe of the Magneto-Electric Multipole Moment, ''Open Res. Europe'', '''2021''', 1:134, (2021), https://doi.org/10.12688/openreseurope.13863.2
  
 
* Bhowal, S., Spaldin, N.A., Revealing Hidden Magnetoelectric Multipoles Using Compton Scattering, ''Phys. Rev. Research'', '''3''', 033185, (2021), https://doi.org/10.1103/PhysRevResearch.3.033185
 
* Bhowal, S., Spaldin, N.A., Revealing Hidden Magnetoelectric Multipoles Using Compton Scattering, ''Phys. Rev. Research'', '''3''', 033185, (2021), https://doi.org/10.1103/PhysRevResearch.3.033185
Line 125: Line 340:
 
* Bonino, G., Lovecchio, E., Gruber, N., Münnich, M., Masina, S., Drivers and Impact of the Seasonal Variability of the Organic Carbon Offshore Transport in the Canary Upwelling System, ''Biogeosciences'', '''18''', (2021), 2429-2448, https://doi.org/10.5194/bg-18-2429-2021
 
* Bonino, G., Lovecchio, E., Gruber, N., Münnich, M., Masina, S., Drivers and Impact of the Seasonal Variability of the Organic Carbon Offshore Transport in the Canary Upwelling System, ''Biogeosciences'', '''18''', (2021), 2429-2448, https://doi.org/10.5194/bg-18-2429-2021
  
* Böttcher, L., Nagier, J., Decisive Conditions for Strategic Vaccination Against SARS-CoV-2, ''Chaos'', '''31''', 101105, (2021), https://doi.org/10.1063/5.0066992
+
* Böttcher, L., Nagler, J., Decisive Conditions for Strategic Vaccination Against SARS-CoV-2, ''Chaos'', '''31''', 101105, (2021), https://doi.org/10.1063/5.0066992
  
 
* Brodowski, C., Sukhodolov, T., Feinberg, A., Höpfner, M., Peter, T., Stenke, A., Rozanov, E., Modeling the Sulfate Aerosol Evolution After Recent Moderate Volcanic Activity, 2008–2012, ''J. Geophys. Res. Atmos.'', '''126''', e2021JD035472, (2021), https://doi.org/10.1029/2021JD035472
 
* Brodowski, C., Sukhodolov, T., Feinberg, A., Höpfner, M., Peter, T., Stenke, A., Rozanov, E., Modeling the Sulfate Aerosol Evolution After Recent Moderate Volcanic Activity, 2008–2012, ''J. Geophys. Res. Atmos.'', '''126''', e2021JD035472, (2021), https://doi.org/10.1029/2021JD035472
Line 200: Line 415:
  
 
* Mittelviefhaus, M., Pareschi, G., Allan, J., Georges, G., Boulouchos, K., Optimal Investment and Scheduling of Residential Multi-Energy Systems Including Electric Mobility: A Cost-Effective Approach to Climate Change Mitigation, ''Appl. Energ.'', '''301''', 117445, (2021), https://doi.org/10.1016/j.apenergy.2021.117445
 
* Mittelviefhaus, M., Pareschi, G., Allan, J., Georges, G., Boulouchos, K., Optimal Investment and Scheduling of Residential Multi-Energy Systems Including Electric Mobility: A Cost-Effective Approach to Climate Change Mitigation, ''Appl. Energ.'', '''301''', 117445, (2021), https://doi.org/10.1016/j.apenergy.2021.117445
 +
 +
* Mizrahi, L., Nandan, Sh., Wiemer, St., Embracing Data Incompleteness for Better Earthquake Forecasting, ''J. Geophys. Res. Sol. Ea.'', '''126(12)''', e2021JB0223709, (2021), https://doi.org/10.1029/2021JB022379
  
 
* Molignini, P., Celades, A.G., Chitra, R., Chen, W., Crossdimensional Universality Classes in Static and Periodically Driven Kitaev Models, ''Phys. Rev. B'', '''103''', 184507, (2021), https://doi.org/10.1103/PhysRevB.103.184507
 
* Molignini, P., Celades, A.G., Chitra, R., Chen, W., Crossdimensional Universality Classes in Static and Periodically Driven Kitaev Models, ''Phys. Rev. B'', '''103''', 184507, (2021), https://doi.org/10.1103/PhysRevB.103.184507
Line 474: Line 691:
  
 
* Grifoni, E., Piccini, G.M., Parrinello, M., Microscopic Description of Acid–base Equilibrium, ''PNAS'', '''116(10)''', (2019), 4054-4057, https://doi.org/10.1073/pnas.1819771116
 
* Grifoni, E., Piccini, G.M., Parrinello, M., Microscopic Description of Acid–base Equilibrium, ''PNAS'', '''116(10)''', (2019), 4054-4057, https://doi.org/10.1073/pnas.1819771116
 
* Grimmel, S.A., Reiher, M., The Electrostatic Potential as a Descriptor for the Protonation Propensity in Automated Exploration of Reaction Mechanisms, ''Faraday Discuss.'', '''2019''', (2019), 443-463, https://doi.org/10.1039/c9fd00061e
 
  
 
* Grosheintz-Laval, L., Käppeli, R., High-Order Well-Balanced Finite Volume Schemes for the Euler Equations with Gravitation, ''J. Comput. Phys.'', '''378''', (2019), 324-343, https://doi.org/10.1016/j.jcp.2018.11.018
 
* Grosheintz-Laval, L., Käppeli, R., High-Order Well-Balanced Finite Volume Schemes for the Euler Equations with Gravitation, ''J. Comput. Phys.'', '''378''', (2019), 324-343, https://doi.org/10.1016/j.jcp.2018.11.018
Line 659: Line 874:
  
 
* Porer, M., Fechner, M., Bothschafter, E.M., Rettig, L., Savoini, M., Esposito, V., Rittmann, J., Kubli, M., Neugebauer, M.J., Abreu, E., Kubacka, T., Huber, T., Lantz, G., Parchenko, S., Grübel, S., Paarmann, A., Noack, J., Beaud, P., Ingold, G., Aschauer, U., Johnson, S.L., Staub, U., Ultrafast Relaxation Dynamics of the Antiferrodistortive Phase in Ca Doped SrTiO<sub>3</sub>, ''Phys. Rev. Lett.'', '''121''',  055701, (2018), https://doi.org/10.1103/PhysRevLett.121.055701
 
* Porer, M., Fechner, M., Bothschafter, E.M., Rettig, L., Savoini, M., Esposito, V., Rittmann, J., Kubli, M., Neugebauer, M.J., Abreu, E., Kubacka, T., Huber, T., Lantz, G., Parchenko, S., Grübel, S., Paarmann, A., Noack, J., Beaud, P., Ingold, G., Aschauer, U., Johnson, S.L., Staub, U., Ultrafast Relaxation Dynamics of the Antiferrodistortive Phase in Ca Doped SrTiO<sub>3</sub>, ''Phys. Rev. Lett.'', '''121''',  055701, (2018), https://doi.org/10.1103/PhysRevLett.121.055701
 +
 +
* Ramrath, D.J., Niemann, M., Leibundgut, M., Bieri, Ph., Prange, C., Horn, E.K., Leitner, A., Boehringer, D., Schneider, A., Ban, N., Evolutionary Shift Toward Protein-Based Architecture in Trypanosomal Mitochondrial Ribosomes, ''Science'', '''362''', eaau7735, (2018), https://doi.org/10.1126/science.aau7735
  
 
* Remondi, F., Kirchner, J.W., Burlando, P., Fatichi, S., Water Flux Tracking With a Distributed Hydrological Model to Quantify Controls on the Spatio temporal Variability of Transit Time Distributions, ''Water Resour. Res.'', '''54''', (2018), 3081-3099, https://doi.org/10.1002/2017WR021689
 
* Remondi, F., Kirchner, J.W., Burlando, P., Fatichi, S., Water Flux Tracking With a Distributed Hydrological Model to Quantify Controls on the Spatio temporal Variability of Transit Time Distributions, ''Water Resour. Res.'', '''54''', (2018), 3081-3099, https://doi.org/10.1002/2017WR021689
Line 900: Line 1,117:
  
 
* Gerya, T., Burov, E., Nucleation and Evolution of Ridge-Ridge-Ridge Triple Junctions: Thermomechanical Model and Geometrical Theory, ''Tectonophysics'', '''746''', (2018), 83-105, https://doi.org/10.1016/j.tecto.2017.10.020
 
* Gerya, T., Burov, E., Nucleation and Evolution of Ridge-Ridge-Ridge Triple Junctions: Thermomechanical Model and Geometrical Theory, ''Tectonophysics'', '''746''', (2018), 83-105, https://doi.org/10.1016/j.tecto.2017.10.020
 +
 +
* Gut, G., Herrmann, M.D., Pelkmans, L., Multiplexed Protein Maps Link Subcellular Organization to Cellular States, ''Science'', '''361''', eaar7042, (2018), https://doi.org/10.1126/science.aar7042
  
 
* Popovic, D., Koch, B., Kueblbeck, M., Ellenberg, J., Pelkmans, J., Multivariate Control of Transcript to Protein Variability in Single Mammalian Cells, ''Cell Systems'', '''7''', (2018), 398-411, https://doi.org/10.1016/j.cels.2018.09.001
 
* Popovic, D., Koch, B., Kueblbeck, M., Ellenberg, J., Pelkmans, J., Multivariate Control of Transcript to Protein Variability in Single Mammalian Cells, ''Cell Systems'', '''7''', (2018), 398-411, https://doi.org/10.1016/j.cels.2018.09.001
Line 973: Line 1,192:
  
 
* Rindlisbacher, T., de Forcrand, Ph., Worm Algorithm for the CP<sup>N-1</sup> Model, ''Nucl. Phys. B'', '''918''', (2017), 178-219, https://doi.org/10.1016/j.nuclphysb.2017.02.021
 
* Rindlisbacher, T., de Forcrand, Ph., Worm Algorithm for the CP<sup>N-1</sup> Model, ''Nucl. Phys. B'', '''918''', (2017), 178-219, https://doi.org/10.1016/j.nuclphysb.2017.02.021
 +
 +
* Rosenberger, G., Liu, Y., Röst, H.L., Ludwig, Ch., Buil, A., Bensimon, A., Soste, M., Spector, T.D., Dermitzakis, E.T., Collins, B.C., Malmström, L., Aebersold, R., Inference and Quantification of Peptidoforms in Large Sample Cohorts by SWATH-MS, ''Nat. Biotech.'', '''35''', (2017), 781-788, https://doi.org/10.1038/nbt.3908
  
 
* Schopfer, S., Tiefenbeck, V., Fleisch, E., Staake, Th., Providing Primary Frequency Control with Residential scale Photovoltaic-Battery Systems, ''Comput. Sci. Res. Dev.'', '''32''', (2017), 105-115, https://doi.org/10.1007/s00450-016-0318-3
 
* Schopfer, S., Tiefenbeck, V., Fleisch, E., Staake, Th., Providing Primary Frequency Control with Residential scale Photovoltaic-Battery Systems, ''Comput. Sci. Res. Dev.'', '''32''', (2017), 105-115, https://doi.org/10.1007/s00450-016-0318-3
Line 1,004: Line 1,225:
  
 
* Gupta, A., Hepp, B., Khammash, M., Noise Induces the Population-Level Entrainment of Incoherent, Uncoupled Intracellular Oscillators, ''Cell Systems'', '''3(6)''', (2016), 521-531, https://doi.org/10.1016/j.cels.2016.10.006
 
* Gupta, A., Hepp, B., Khammash, M., Noise Induces the Population-Level Entrainment of Incoherent, Uncoupled Intracellular Oscillators, ''Cell Systems'', '''3(6)''', (2016), 521-531, https://doi.org/10.1016/j.cels.2016.10.006
 +
 +
* Gusev, A.A., Controlled Accuracy Finite Element Estimates for the Effective Stiffness of Composites With Spherical Inclusions, ''Int. J. Solids Struct.'', '''80''', (2016), 227-236, https://doi.org/10.1016/j.ijsolstr.2015.11.006
 +
 +
* Gusev, A.A., Time Domain Finite Element Estimates of Dynamic Stiffness of Viscoelastic Composites With Stiff Spherical Inclusions, ''Int. J. Solids Struct.'', '''88-89''', (2016), 79-87, https://doi.org/10.1016/j.ijsolstr.2016.03.021
  
 
* Hässig, M., Duretz, T., Rolland, Y., Sosson, M., Obduction of Old Oceanic Lithosphere Due to Reheating and Plate Reorganization: Insights from Numerical Modelling and the NE Anatolia – Lesser Caucasus Case Example, ''J. Geodyn.'', '''96''', (2016), 35-49, https://doi.org/10.1016/j.jog.2016.02.007
 
* Hässig, M., Duretz, T., Rolland, Y., Sosson, M., Obduction of Old Oceanic Lithosphere Due to Reheating and Plate Reorganization: Insights from Numerical Modelling and the NE Anatolia – Lesser Caucasus Case Example, ''J. Geodyn.'', '''96''', (2016), 35-49, https://doi.org/10.1016/j.jog.2016.02.007
 +
 +
* Hupp, D., Arbenz, P., Obrist, D., A Parallel Navier–Stokes Solver Using Spectral Discretisation in Time, ''Int. J. Comput. Fluid D.'', '''30''', (2016), 489-494, https://doi.org/10.1080/10618562.2016.1242725
  
 
* Imriška, J., Gull, E., Troyer, M., Thermodynamics of the Hubbard Model on Stacked Honeycomb and Square Lattices, ''Eur. Phys. J. B'', '''89''', 171, (2016), https://doi.org/10.1140/epjb/e2016-70146-y
 
* Imriška, J., Gull, E., Troyer, M., Thermodynamics of the Hubbard Model on Stacked Honeycomb and Square Lattices, ''Eur. Phys. J. B'', '''89''', 171, (2016), https://doi.org/10.1140/epjb/e2016-70146-y
Line 1,111: Line 1,338:
  
 
* Kellog, R., Tay, S., Noise Facilitates Transcriptional Control under Dynamic Inputs, ''Cell'', '''160(3)''', (2015), 381-392, https://doi.org/10.1016/j.cell.2015.01.013
 
* Kellog, R., Tay, S., Noise Facilitates Transcriptional Control under Dynamic Inputs, ''Cell'', '''160(3)''', (2015), 381-392, https://doi.org/10.1016/j.cell.2015.01.013
 +
 +
* Kunszt, P., Blum, L., Hullár, B., Schmid, E., Srebniak, A., Wolski, W., Rinn, B., Elmer, F.-J., Ramakrishnan, Ch., Quandt, A., Malmström, L., iPortal: The Swiss Grid Proteomics Portal: Requirements and New Features Based on Experience and Usability Considerations, ''Concurr. Comp.-Pract. E.'', '''27''', (2015), 433-445, https://doi.org/10.1002/cpe.3294
  
 
* Li, Y., Deschamps, F., Tackley, P.J., Effects of the Post-Perovskite Phase Transition Properties on the Stability and Structure of Primordial Reservoirs in the Lower Mantle of the Earth, ''Earth Planet. Sci. Lett.'', '''432''', (2015), 1-12, https://doi.org/10.1016/j.epsl.2015.09.040
 
* Li, Y., Deschamps, F., Tackley, P.J., Effects of the Post-Perovskite Phase Transition Properties on the Stability and Structure of Primordial Reservoirs in the Lower Mantle of the Earth, ''Earth Planet. Sci. Lett.'', '''432''', (2015), 1-12, https://doi.org/10.1016/j.epsl.2015.09.040
Line 1,119: Line 1,348:
  
 
* Malik, M., Meru, F., Mayer, L., Meyer, M., On the Gap-Opening Criterion of Migrating Plantes in Protoplanetary Disks, ''ApJ'', '''802''', 56, (2015), https://doi.org/10.1088/0004-637X/802/1/56
 
* Malik, M., Meru, F., Mayer, L., Meyer, M., On the Gap-Opening Criterion of Migrating Plantes in Protoplanetary Disks, ''ApJ'', '''802''', 56, (2015), https://doi.org/10.1088/0004-637X/802/1/56
 +
 +
* Malmström, L., Bakochi, A., Svensson, G., Kilsgård, O., Lantz, H., Petersson, A.C., Hauri, S., Karlsson, Ch., Malmström, J., Quantitative Proteogenomics of Human Pathogens Using DIA-MS, ''J. Proteomics'', '''129''', (2015), 98-107, https://doi.org/10.1016/j.jprot.2015.09.012
  
 
* McCarty, J., Valsson, O., Tiwary, P., Parrinello, M., Variationally Optimized Free-Energy Flooding for Rate Calculation, ''Phys. Rev. Lett.'', '''115''', 080601, (2015), https://doi.org/10.1103/PhysRevLett.115.070601
 
* McCarty, J., Valsson, O., Tiwary, P., Parrinello, M., Variationally Optimized Free-Energy Flooding for Rate Calculation, ''Phys. Rev. Lett.'', '''115''', 080601, (2015), https://doi.org/10.1103/PhysRevLett.115.070601
Line 1,155: Line 1,386:
  
 
* Salvalaglio, M., Perego, C., Giberti, F., Mazzotti, M., Parrinello, M., Molecular-Dynamics Simulations of Urea Nucleation from Aqueous Solution, ''PNAS'', '''112(1)''', (2015), E6-E14, https://doi.org/10.1073/pnas.1421192111
 
* Salvalaglio, M., Perego, C., Giberti, F., Mazzotti, M., Parrinello, M., Molecular-Dynamics Simulations of Urea Nucleation from Aqueous Solution, ''PNAS'', '''112(1)''', (2015), E6-E14, https://doi.org/10.1073/pnas.1421192111
 +
 +
* Schilling, Ch., Quasipinning and Its Relevance for '''''N'''''-Fermion Quantum States, ''Phys. Rev. A'', '''91''', 022105, (2015), https://doi.org/10.1103/PhysRevA.91.022105
  
 
* Sizova, E., Gerya, T., Stüwe, K., Brown, M., Generation of Felsic Crust in the Archean: A Geodynamic Modeling Perspective, ''Precambrian Res.'', '''271''', (2015), 198-224, https://doi.org/10.1016/j.precamres.2015.10.005
 
* Sizova, E., Gerya, T., Stüwe, K., Brown, M., Generation of Felsic Crust in the Archean: A Geodynamic Modeling Perspective, ''Precambrian Res.'', '''271''', (2015), 198-224, https://doi.org/10.1016/j.precamres.2015.10.005
 +
 +
* Shao, Sh., Guo, T., Koh, Ch.Ch., Gillessen, S., Joerger, M., Jochum, W., Aebersold, R., Minimal Sample Requirement for Highly Multiplexed Protein Quantification in Cell Lines and Tissues by PCT-SWATH Mass Spectrometry, ''Proteomics'', '''15(21)''', (2015), 3711-3721, https://doi.org/10.1002/pmic.201500161
  
 
* Shinaoka, H., Hoshino, Sh., Troyer, M., Werner, Ph., Phase Diagram of Pyrochlore Iridates: All-in–All-out Magnetic Ordering and Non-Fermi-Liquid Properties, ''Phys. Rev. Lett.'', '''115''', 156401, (2015), https://doi.org/10.1103/PhysRevLett.115.156401  
 
* Shinaoka, H., Hoshino, Sh., Troyer, M., Werner, Ph., Phase Diagram of Pyrochlore Iridates: All-in–All-out Magnetic Ordering and Non-Fermi-Liquid Properties, ''Phys. Rev. Lett.'', '''115''', 156401, (2015), https://doi.org/10.1103/PhysRevLett.115.156401  
Line 1,167: Line 1,402:
  
 
* Tiwary, P., Parrinello, M., A Time-Independent Free Energy Estimator for Metadynamics, ''J. Phys. Chem. B'', '''119''', (2015), 736-742, https://doi.org/10.1021/jp504920s
 
* Tiwary, P., Parrinello, M., A Time-Independent Free Energy Estimator for Metadynamics, ''J. Phys. Chem. B'', '''119''', (2015), 736-742, https://doi.org/10.1021/jp504920s
 +
 +
* Uehara, A., Shinaoka, H., Motome, Y., Analysis of Charge-Spin-Orbital Fluctuations by Ab Initio Calculation and Random Phase Approximation: Application to Non-coplanar Antiferromagnet Cd<sub>2</sub>Os<sub>2</sub>O<sub>7</sub>, ''Physcs. Proc.'', '''75''', (2015), 495-502, https://doi.org/10.1016/j.phpro.2015.12.062
  
 
* Uehara, A., Shinaoka, H., Motome, Y., Charge-Spin-Orbital Fluctuations in Mixed Valence Spinels: Comparative Study of AlV<sub>2</sub>O<sub>4</sub> and LiV<sub>2</sub>O<sub>4</sub>, ''Phys. Rev. B'', '''92''', 195150, https://doi.org/10.1103/PhysRevB.92.195150
 
* Uehara, A., Shinaoka, H., Motome, Y., Charge-Spin-Orbital Fluctuations in Mixed Valence Spinels: Comparative Study of AlV<sub>2</sub>O<sub>4</sub> and LiV<sub>2</sub>O<sub>4</sub>, ''Phys. Rev. B'', '''92''', 195150, https://doi.org/10.1103/PhysRevB.92.195150
Line 1,226: Line 1,463:
  
 
* Gukelberger, J., Kozi, E., Pollet, L., Prokof'ev, N., Sigrist, M., Svistunov, B., Troyer, M., '''''p'''''-Wave Superfluidity by Spin-Nematic Fermi Surface Deformation, ''Phys. Rev. Lett.'', '''113''', 195301, (2014), https://doi.org/10.1103/PhysRevLett.113.195301
 
* Gukelberger, J., Kozi, E., Pollet, L., Prokof'ev, N., Sigrist, M., Svistunov, B., Troyer, M., '''''p'''''-Wave Superfluidity by Spin-Nematic Fermi Surface Deformation, ''Phys. Rev. Lett.'', '''113''', 195301, (2014), https://doi.org/10.1103/PhysRevLett.113.195301
 +
 +
* Gusev, A.A., Effective Coefficient of Thermal Expansion of N-Layered Composite Sphere Model: Exact Solution and Its Finite Element Validation, ''Int. J. Eng. Sci.'', '''84''', (2014), https://doi.org/10.1016/j.ijengsci.2014.06.012
  
 
* Holme, M.N., Schulz, G., Deyhle, H., Weitkamp, T., Beckmann, F., Lobrinus, J.A., Rikhtegar, F., Kurcuoglu, V., Zanette, I., Saxer, T., Müller, B., Complementary X-Ray Tomography Techniques for Histology-Validated 3D Imaging of Soft and Hard Tissues Using Plaque-Containing Blood Vessels as Examples, ''Nat. Protoc.'', '''9''', (2014), 1401-1415, https://doi.org/10.1038/nprot.2014.091
 
* Holme, M.N., Schulz, G., Deyhle, H., Weitkamp, T., Beckmann, F., Lobrinus, J.A., Rikhtegar, F., Kurcuoglu, V., Zanette, I., Saxer, T., Müller, B., Complementary X-Ray Tomography Techniques for Histology-Validated 3D Imaging of Soft and Hard Tissues Using Plaque-Containing Blood Vessels as Examples, ''Nat. Protoc.'', '''9''', (2014), 1401-1415, https://doi.org/10.1038/nprot.2014.091
Line 1,268: Line 1,507:
  
 
* Rolf, T., Coltice, N., Tackley, P.J., Statistical Cyclicity of the Supercontinent Cycle, ''Geophys. Res. Lett.'', '''41(7)''', (2014), 2351-2358, https://doi.org/10.1002/2014GL059595
 
* Rolf, T., Coltice, N., Tackley, P.J., Statistical Cyclicity of the Supercontinent Cycle, ''Geophys. Res. Lett.'', '''41(7)''', (2014), 2351-2358, https://doi.org/10.1002/2014GL059595
 +
 +
* Röst, H.L., Rosenberger, G., Navarro, P., Gillet, L., Miladinović, S.M., Schubert, O.T., Wolski, W., Collins, B.C., Malmström, J., Malmström, L., Aebersold, R., OpenSWATH Enables Automated, Targeted Analysis of Data-Independent Acquisition MS Data, ''Nat. Biotech.'', '''32''', (2014), 219-223, https://doi.org/10.1038/nbt.2841
  
 
* Roten D., Fäh, D., Bonilla, F., Quantification of Cyclic Mobility Parameters in Liquefiable Soils from Inversion of Vertical Array Records, ''B. Seismol. Soc. Am.'', '''104(6)''', (2014), 3115-3138, https://doi.org/10.1785/0120130329
 
* Roten D., Fäh, D., Bonilla, F., Quantification of Cyclic Mobility Parameters in Liquefiable Soils from Inversion of Vertical Array Records, ''B. Seismol. Soc. Am.'', '''104(6)''', (2014), 3115-3138, https://doi.org/10.1785/0120130329
Line 1,379: Line 1,620:
  
 
* Kozik, E., Burovski, E., Scarola, V.W., Troyer, M., Néel Temperature and Thermodynamics of the Half-Filled Three-Dimensional Hubbard Model by Diagrammatic Determinant Monte Carlo, ''Phys. Rev. B'', '''87''', 205102, (2013), https://doi.org/10.1103/PhysRevB.87.205102
 
* Kozik, E., Burovski, E., Scarola, V.W., Troyer, M., Néel Temperature and Thermodynamics of the Half-Filled Three-Dimensional Hubbard Model by Diagrammatic Determinant Monte Carlo, ''Phys. Rev. B'', '''87''', 205102, (2013), https://doi.org/10.1103/PhysRevB.87.205102
 +
 +
* Lachkar, Z., Effects of Upwelling Increase on Ocean Acidification in the California and Canary Current Systems, ''Geophys. Res. Lett.'', '''41''', (2013), 90-95, https://doi.org/10.1002/2013GL058726
  
 
* Lachkar, Z., Gruber, N., Response of Biological Production and Air–sea CO2 Fluxes to Upwelling Intensification in the California and Canary Current Systems, ''J. Marine Syst.'', '''109-110''', (2013), 149-160, https://doi.org/10.1016/j.jmarsys.2012.04.003
 
* Lachkar, Z., Gruber, N., Response of Biological Production and Air–sea CO2 Fluxes to Upwelling Intensification in the California and Canary Current Systems, ''J. Marine Syst.'', '''109-110''', (2013), 149-160, https://doi.org/10.1016/j.jmarsys.2012.04.003
Line 1,456: Line 1,699:
  
 
* Colombi, A., Nissen-Meyer, T., Boschi, L., Giardini, D., Seismic Waveform Sensitivity to Global Boundary Topography, ''Geophys. J. Int.'', '''191''', (2012), 832-848, https://doi.org/10.1111/j.1365-246X.2012.05660.x
 
* Colombi, A., Nissen-Meyer, T., Boschi, L., Giardini, D., Seismic Waveform Sensitivity to Global Boundary Topography, ''Geophys. J. Int.'', '''191''', (2012), 832-848, https://doi.org/10.1111/j.1365-246X.2012.05660.x
 +
 +
* Corboz, Ph., Capponi, S., Läuchli, A.M., Bauer, B., Orús, R., Comment on “Topological Quantum Phase Transitions of Attractive Spinless Fermions in a Honeycomb Lattice” By Poletti D. et al., ''EPL'', '''98''', 27005, (2012), https://doi.org/10.1209/0295-5075/98/27005
  
 
* Corboz, Ph., Lajkó, M., Läuchli, A.M., Penc, K., Mila, F., Spin-Orbital Quantum Liquid on the Honeycomb Lattice, ''Phys. Rev. X'', '''2''', 041013, (2012), https://doi.org/10.1103/PhysRevX.2.041013
 
* Corboz, Ph., Lajkó, M., Läuchli, A.M., Penc, K., Mila, F., Spin-Orbital Quantum Liquid on the Honeycomb Lattice, ''Phys. Rev. X'', '''2''', 041013, (2012), https://doi.org/10.1103/PhysRevX.2.041013
Line 1,502: Line 1,747:
  
 
* Mishra, S., Schwab, Ch., Šukys, J., Multi-Level Monte Carlo Finite Volume Methods for Nonlinear Systems of Conservation Laws in Multi-Dimensions, ''J. Comput Phys.'', '''231(8)''', (2012), 3365-3388, https://doi.org/10.1016/j.jcp.2012.01.011
 
* Mishra, S., Schwab, Ch., Šukys, J., Multi-Level Monte Carlo Finite Volume Methods for Nonlinear Systems of Conservation Laws in Multi-Dimensions, ''J. Comput Phys.'', '''231(8)''', (2012), 3365-3388, https://doi.org/10.1016/j.jcp.2012.01.011
 +
 +
* Mishra, S., Schwab, Ch., Sukys, J., Multilevel Monte Carlo Finite Volume Methods for Shallow Water Equations with Uncertain Topography in Multi-dimensions, ''SIAM J. Sci. Comput.'', '''34''', (2012), B761-B784, https://doi.org/10.1137/110857295
  
 
* Misselwitz, B., Barrett, N., Kreibich, S., Vonaesch, P., Andritschke, D., Rout, S., Weidner, K., Sormaz, M., Songhet, P., Horvath, P., Chabria, M., Vogel, V., Spori, D.M., Jenny, P., Hardt, W.-D., Near Surface Swimming of ''Salmonella'' Typhimurium Explains Target-Site Selection and Cooperative Invasion, ''PLoS Pathog.'', '''8(7)''', e1002810, (2012), https://doi.org/10.1371/journal.ppat.1002810
 
* Misselwitz, B., Barrett, N., Kreibich, S., Vonaesch, P., Andritschke, D., Rout, S., Weidner, K., Sormaz, M., Songhet, P., Horvath, P., Chabria, M., Vogel, V., Spori, D.M., Jenny, P., Hardt, W.-D., Near Surface Swimming of ''Salmonella'' Typhimurium Explains Target-Site Selection and Cooperative Invasion, ''PLoS Pathog.'', '''8(7)''', e1002810, (2012), https://doi.org/10.1371/journal.ppat.1002810
Line 1,710: Line 1,957:
  
 
* Katzgraber, H.G., Bombin, H., Andrist, R.S., Martin-Delgado, M.A., Topological Color Codes on Union Jack Lattices: a Stable Implementation of the Whole Clifford Group, ''Phys. Rev. A'', '''81''', 012319, (2010), https://doi.org/10.1103/PhysRevA.81.012319
 
* Katzgraber, H.G., Bombin, H., Andrist, R.S., Martin-Delgado, M.A., Topological Color Codes on Union Jack Lattices: a Stable Implementation of the Whole Clifford Group, ''Phys. Rev. A'', '''81''', 012319, (2010), https://doi.org/10.1103/PhysRevA.81.012319
 +
 +
* Katzgraber, H.G., Hartmann, A.K., Young, A.P., New Insights From One-Dimensional Spin Glasses, ''Physcs. Proc.'', '''6''', (2010), 35-45, https://doi.org/10.1016/j.phpro.2010.09.026
  
 
* Kozik, E., Van Houcke, K., Gull, E., Pollet, L., Prokof'ev, N., Svistunov, B., Troyer, M., Diagrammatic Monte Carlo for Correlated Fermions, ''EPL'', '''90''', 10004, (2010), https://doi.org/10.1209/0295-5075/90/10004
 
* Kozik, E., Van Houcke, K., Gull, E., Pollet, L., Prokof'ev, N., Svistunov, B., Troyer, M., Diagrammatic Monte Carlo for Correlated Fermions, ''EPL'', '''90''', 10004, (2010), https://doi.org/10.1209/0295-5075/90/10004
Line 1,722: Line 1,971:
  
 
* Misselwitz, B., Strittmatter, G., Periaswamy, B., Schlumberger, M.C., Rout, S., Horvath, P., Kozak, K., Hardt, W.-D., Enhanced CellClassifier: a Multi-Class Classification Tool for Microscopy Images, ''BMC Bioinformatics'', '''11''', 30, (2010), https://doi.org/10.1186/1471-2105-11-30
 
* Misselwitz, B., Strittmatter, G., Periaswamy, B., Schlumberger, M.C., Rout, S., Horvath, P., Kozak, K., Hardt, W.-D., Enhanced CellClassifier: a Multi-Class Classification Tool for Microscopy Images, ''BMC Bioinformatics'', '''11''', 30, (2010), https://doi.org/10.1186/1471-2105-11-30
 +
 +
* Nakagawa, T., Tackley, P.J., Influence of Initial Cmb Temperature and Other Parameters on the Thermal Evolution of Earth’s Core Resulting From Thermochemical Spherical Mantle Convection, ''Geochem. Geophys. Geosyst.'', '''11(6)''', Q06001, (2010), https://doi.org/10.1029/2010GC003031
  
 
* Nakagawa, T., Tackley, P.J., Deschamps, F., Connolly, J.A.D., The Influence of MORB and Harzburgite Composition on Thermo-Chemical Mantle Convection in a 3-D Spherical Shell with Self-Consistently Calculated Mineral Physics, ''Earth Planet. Sci. Lett.'', '''296''', (2010), 403-412, https://doi.org/10.1016/j.epsl.2010.05.026
 
* Nakagawa, T., Tackley, P.J., Deschamps, F., Connolly, J.A.D., The Influence of MORB and Harzburgite Composition on Thermo-Chemical Mantle Convection in a 3-D Spherical Shell with Self-Consistently Calculated Mineral Physics, ''Earth Planet. Sci. Lett.'', '''296''', (2010), 403-412, https://doi.org/10.1016/j.epsl.2010.05.026
Line 1,735: Line 1,986:
 
* Valla, P.G., Herman, F., van der Beek, P.A., Braun, J., Inversion of Thermochronological Age-Elevation Profiles to Extract Independent Estimates of Denudation and Relief History — I: Theory and Conceptual Model, ''Earth Planet. Sc. Lett.'', '''295''', (2010), 511-522, https://doi.org/10.1016/j.epsl.2010.04.033
 
* Valla, P.G., Herman, F., van der Beek, P.A., Braun, J., Inversion of Thermochronological Age-Elevation Profiles to Extract Independent Estimates of Denudation and Relief History — I: Theory and Conceptual Model, ''Earth Planet. Sc. Lett.'', '''295''', (2010), 511-522, https://doi.org/10.1016/j.epsl.2010.04.033
 
* Werner, Ph., Millis, A.J., Dynamical Screening in Correlated Electron Materials, ''Phys. Rev. Lett.'', '''104''', 146401, (2010), https://doi.org/10.1103/PhysRevLett.104.146401
 
* Werner, Ph., Millis, A.J., Dynamical Screening in Correlated Electron Materials, ''Phys. Rev. Lett.'', '''104''', 146401, (2010), https://doi.org/10.1103/PhysRevLett.104.146401
 +
 +
* Werner, Ph., Oka, T., Eckstein, M., Millis, A.J., Weak-Coupling Quantum Monte Carlo Calculations on the Keldysh Contour: Theory and Application to the Current-Voltage Characteristics of the Anderson Model, ''Phys. Rev. B'', '''81''', 035108, (2010), https://doi.org/10.1103/PhysRevB.81.035108
  
 
* Yamada, M., Schweizer, W.B., Schönebeck, F., Diederich, F., Unprecedented Thermal Rearrangement of Push–pull-Chromophore–[60]fullerene Conjugates: Formation of Chiral 1,2,9,12-Tetrakis-Adducts, ''Chem. Commun.'', '''46''', (2010), 5334-5336, https://doi.org/10.1039/C0CC00881H
 
* Yamada, M., Schweizer, W.B., Schönebeck, F., Diederich, F., Unprecedented Thermal Rearrangement of Push–pull-Chromophore–[60]fullerene Conjugates: Formation of Chiral 1,2,9,12-Tetrakis-Adducts, ''Chem. Commun.'', '''46''', (2010), 5334-5336, https://doi.org/10.1039/C0CC00881H
  
 
===2009===
 
===2009===
 +
* Bauer, B., Vidal, G., Troyer, M., Assessing the Accuracy of Projected Entangled-Pair States on Infinite Lattices, ''J. Stat. Mech.'', P09006, (2009), https://doi.org/10.1088/1742-5468/2009/09/P09006
 +
 
* Bonomi, M., Barducci, A., Parrinello, M., Reconstructing the Equilibrium Boltzmann Distribution from Well-Tempered Metadynamics, ''J. Comput. Chem.'', '''30''', (2009), 1615-1621, https://doi.org/10.1002/jcc.21305
 
* Bonomi, M., Barducci, A., Parrinello, M., Reconstructing the Equilibrium Boltzmann Distribution from Well-Tempered Metadynamics, ''J. Comput. Chem.'', '''30''', (2009), 1615-1621, https://doi.org/10.1002/jcc.21305
  
Line 1,780: Line 2,035:
 
* Jörg, Th., Katzgraber, H.G., Universality and Universal Finite-Size Scaling Functions in Four-Dimensional Ising Spin Glasses, ''Phys. Rev. B'', '''77''', 214426, (2008), https://doi.org/10.1103/PhysRevB.77.214426
 
* Jörg, Th., Katzgraber, H.G., Universality and Universal Finite-Size Scaling Functions in Four-Dimensional Ising Spin Glasses, ''Phys. Rev. B'', '''77''', 214426, (2008), https://doi.org/10.1103/PhysRevB.77.214426
  
==Theses referencing HPC clusters==
+
==Publications referencing the HPC team without specifying the cluster that was used==
===Euler===
+
===2022===
====PhD theses====
+
* Cai, Zh.-F., Käser, T., Kumar, N., Zenobi, R., Visualizing On-Surface Decomposition Chemistry at the Nanoscale Using Tip-Enhanced Raman Spectroscopy, ''J. Phys. Chem. Lett.'', '''13''', (2022), 4864-4870, https://doi.org/10.1021/acs.jpclett.2c01112
* Bachmann, Björn J., 2018, Engineering Strategies for Sustainable Endothelialization of a New Type of Ventricular Assist Device, https://doi.org/10.3929/ethz-b-000277918
 
  
* Barido-Sottani, Joëlle, 2018, Complex birth-death models for Bayesian phylodynamic inferences, https://doi.org/10.3929/ethz-b-000308809
+
* Cai, Zh.-F., Merino, J.P., Fang, W., Kumar, N., Richardson, J.O., De Feyter, S., Zenobi, R., Molecular-Level Insights on Reactive Arrangement in On-Surface Photocatalytic Coupling Reactions Using Tip-Enhanced Raman Spectroscopy, ''J. Am. Chem. Soc.'', '''144''', (2022), 538-546, https://doi.org/10.1021/jacs.1c11263
  
* Bauhofer, Anton, 2019, Multiscale Effects of Photochemical Shrinkage in Direct Laser Writing, https://doi.org/10.3929/ethz-b-000339159
+
* Shao, F., Zheng, L., Lan, J., Zenobi, R., Nanoscale Chemical Imaging of Coadsorbed Thiolate Self-Assembled Monolayers on Au(111) by Tip-Enhanced Raman Spectroscopy, ''Anal. Chem.'', '''94''', (2022), 1645-1653, https://doi.org/10.1021/acs.analchem.1c03968
  
* Besta, Maciej, 2021, Enabling High-Performance Large-Scale Irregular Computations, https://doi.org/10.3929/ethz-b-000518644
+
* Stravs, M.A., Dührkop, K., Böcker, S., Zamboni, N., MSNovelist: De Novo Structure Generation from Mass Spectra, ''Nat. Methods'', (2022), https://doi.org/10.1038/s41592-022-01486-3
  
* Bick, Jochen T., 2018, Strategies for Improved RNAseq Data Analysis of Mammalian Species with Incomplete Genome Annotation, https://doi.org/10.3929/ethz-b-000338512
+
* Zheng, L.-Q., Yang, S., Krähenbühl, S., Rybkin, V.V, Lan, J., Aprahamian, I., Zenobi, R., Effect of the Alkyl Linker Length on the Photoisomerization of Hydrazone Switches on Metal Surfaces, ''Mater. Today Chem.'', '''24''', 100797, (2022)
  
* Bieri, Philipp, 2017, Unique Architectural and Evolutionary Features of the Mammalian Mitochondrial and the Plant Chloroplast Ribosome Revealed by Cryo-Electron Microscopy, https://doi.org/10.3929/ethz-b-000202600
+
===2021===
 +
* Bartolomeo, G.L.,  Zhang, Y., Kumar, N., Zenobi, R., Molecular Perturbation Effects in AFM-Based Tip-Enhanced Raman Spectroscopy: Contact versus Tapping Mode, ''Anal. Chem.'', '''93''', (2021), 15358-15364, https://doi.org/10.1021/acs.analchem.1c03004
  
* Bischoff, Tobias, 2017, Dynamics of the Intertropical Convergence Zone, https://thesis.library.caltech.edu/9981/
+
* Cai, Zh.-F., Zheng, L.-Q., Zhang, Y., Zenobi, R., Molecular-Scale Chemical Imaging of the Orientation of an OnSurface Coordination Complex by Tip-Enhanced Raman Spectroscopy, ''J. Am. Chem. Soc.'', '''143''', (2021), 12380-12386, https://doi.org/10.1021/jacs.1c06366
  
* Böcklin, Christoph, 2014, Modelling light propagation in Tissue, https://doi.org/10.3929/ethz-a-010387149
+
* Klose, D., Holla, A., Gmeiner, Ch., Nettels, D., Ritsch, I., Bross, N., Yulikov, M., Allain, F.H.-T., Schuler, B., Jeschke, G., Resolving Distance Variations by Single-Molecule FRET and EPR Spectroscopy Using Rotamer Libraries, ''Biophys. J.'', '''120(21)''', (2021), 4842-4858, https://doi.org/10.1016/j.bpj.2021.09.021
  
* Bolis, Vasco, 2019, Optimal Design and Planning of Industrial Waste-to-Energy Networks: A Swiss Case Study, https://doi.org/10.3929/ethz-b-000330770
+
===2020===
 +
* Yin, H., Zhen, L.-Q., Fang, W., Lai, Y.-H., Porenta, N., Goubert, G., Zhang, H., Su, H.-Sh., Ren, B., Richardson, J.O., Li, J.-F., Zenobi, R., Nanometre-Scale Spectroscopic Visualization of Catalytic Sites During a Hydrogenation Reaction on a Pd/Au Bimetallic Catalyst, ''Nat. Catal.'', '''3''', (2020), 834-842, https://doi.org/10.1038/s41929-020-00511-y
  
* Bonati, Luigi, 2021, Machine learning and enhanced sampling simulations, https://doi.org/10.3929/ethz-b-000517813
+
===2019===
 +
* Grimmel, S.A., Reiher, M., The Electrostatic Potential as a Descriptor for the Protonation Propensity in Automated Exploration of Reaction Mechanisms, ''Faraday Discuss.'', '''2019''', (2019), 443-463, https://doi.org/10.1039/c9fd00061e
  
* Boskova, Veronika, 2017, Pathogen phylodynamics: better, smarter and faster, https://doi.org/10.3929/ethz-b-000233808
+
* Zheng, L.-Q., Servalli, M., Schlüter, A.D., Zenobi, R., Tip-Enhanced Raman Spectroscopy for Structural Analysis of Two-Dimensional Covalent Monolayers Synthesized on Water and on Au (111), ''Chem. Sci.'', '''10''', (2019), 9673-9678, https://doi.org/10.1039/C9SC03296G
  
* Chaudhry, Sukant, 2021, Surface related uncertainties of laser scanning: a simulation-based and experimental study, https://doi.org/10.3929/ethz-b-000533401
+
* Zheng, L.-Q., Lan, J., Gyr, L., Goubert, G., Qian, H., Aprahamian, I., Zenobi, R., Solution Phase and Surface Photoisomerization of a Hydrazone Switch with a Long Thermal Half-Life, ''J. Am. Chem. Soc.'', '''141''', (2019), 17637-17645, https://doi.org/10.1021/jacs.9b07057
  
* Coulon, Ancelin, 2016, The Drivers of Atmospheric Methane Fluctuations over the Last Three Decades, https://doi.org/10.3929/ethz-b-000170678
+
===2018===
 +
* Frenoy, A., Bonhoeffer, S., Death and Population Dynamics Affect Mutation Rate Estimates and Evolvability Under Stress in Bacteria, ''PLoS Biol.'', '''16(5)''', e2005056, (2018), https://doi.org/10.1371/journal.pbio.2005056
  
* Crameri, Simon, 2020, Phylogenomics, Species Discovery and Integrative Taxonomy in Dalbergia (Fabaceae) Precious Woods from Madagascar, https://doi.org/10.3929/ethz-b-000487274
+
* Zheng, L.-Q., Wang, X., Shao, F., Hegner, M., Zenobi, R., Nanoscale Chemical Imaging of Reversible Photoisomerization of an Azobenzene-Thiol Self-Assembled Monolayer by Tip-Enhanced Raman Spectroscopy, ''Angew. Chem.'', '''130(4)''', (2018), 1037-1041, https://doi.org/10.1002/ange.201710443
  
* Dal Zilio, Luca, 2019, Cross-scale modeling of mountain building and the seismic cycle: From Alps to Himalaya, https://doi.org/10.3929/ethz-b-000377255
+
===2016===
 +
* Dai, W., Shao, F., Szczerbiński, J., McCaffrey, R., Zenobi, R., Jin, Y., Schlüter, A.D., Zhang, W., Synthesis of a Two-Dimensional Covalent Organic Monolayer through Dynamic Imine Chemistry at the Air/Water Interface, ''Angew. Chem.'', '''128(1)''', (2016), 221-225, https://doi.org/10.1002/ange.201508473
  
* Debnath, Jayashrita, 2022, Rare Event Dynamics, https://doi.org/10.3929/ethz-b-000537320
+
===2013===
 +
* Hassanali, A., Giberti, F., Cuny, J., Kühne, T.D., Parrinello, M., Proton Transfer Through the Water Gossamer, ''PNAS'', '''110''', (2013), 13723-13728, https://doi.org/10.1073/pnas.1306642110
  
* Ding, Sophia, 2019, Selection Models in the Presence of Networks: Theory and Application for Panel Data, https://doi.org/10.3929/ethz-b-000385927
+
===2012===
 +
* Eshet, H., Khaliullin, R.Z., Kühne, Th.D., Behler, J., Parrinello, M., Microscopic Origins of the Anomalous Melting Behavior of Sodium under High Pressure, ''Phys. Rev. Lett.'', '''108''', 115701, (2012), https://doi.org/10.1103/PhysRevLett.108.115701
  
* Dorostkar, Omid, 2018, Stick-slip dynamics in dry and fluid saturated granular fault gouge investigated by numerical simulations, https://doi.org/10.3929/ethz-b-000283977
+
* Hassanali, A., Cuny, J., Ceriotti, M., Pickard, Ch.J., Parrinello, M., The Fuzzy Quantum Proton in the Hydrogen Chloride Hydrates, ''J. Am. Chem. Soc.'', '''134''', (2012), 8557-8569, https://doi.org/10.1021/ja3014727
  
* Dünner, Robert, 2020, Parasite Ping Pong - Host-Parasite Coevolution, Metapopulation Structure and Genetic Diversity, https://doi.org/10.3929/ethz-b-000443380
+
===2011===
 +
* Hassanali, A., Prakash, M.K., Eshet, H., Parrinello, M., On the Recombination of Hydronium and Hydroxide Ions in Water, ''PNAS'', '''108''', (2011), 20410-20415, https://doi.org/10.1073/pnas.1112486108
  
* Esteban Hofer, Laura, 2022, EPR Characterization of Intrinsic Disorder in the RNA-Binding Proteins FUS and SRSF1, https://doi.org/10.3929/ethz-b-000545149
+
* Khaliullin, R.Z., Eshet, H., Kühne, Th.D., Behler, J., Parrinello, M., Nucleation Mechanism for the Direct Graphite-To-Diamond Phase Transition, ''Nat. Mater.'', '''10''', (2011), 693-697, https://doi.org/10.1038/nmat3078
  
* Fagioli, Martina, 2020, Observations and Forward Modeling of Spectroscopic Galaxy Surveys, https://doi.org/10.3929/ethz-b-000451407
+
* Prakash, M.K., Barducci, A., Parrinello, M., Replica Temperatures for Uniform Exchange and Efficient Roundtrip Times in Explicit Solvent Parallel Tempering Simulations, ''J. Chem. Theory Comput.'', '''7(7)''', (2011), 2025-2027, https://doi.org/10.1021/ct200208h
  
* Fahrni, Reto, 2021, Reliability-based code calibration for timber in fire, https://doi.org/10.3929/ethz-b-000475057
+
===2011===
 +
* Mischo, B., Burdet, A., Abhari, R.S., Influence of Stator-Rotor Interaction on the Aerothermal Performance of Recess Blade Tips, ''J. Turbomach.'', '''133(1)''', 011023, (2011), https://doi.org/10.1115/1.4001134
  
* Florio, Kevin, 2021, Powder Bed Fusion of Ceramic Oxides: Process Development and Process Understanding, https://doi.org/10.3929/ethz-b-000544358
+
* Schaefer, J.F., Boschi, L., Kissling, E., Adaptively Parametrized Surface Wave Tomography: Methodology and a New Model of the European Upper Mantle, ''Geophys. J. Int.'', '''186''', (2011), 1431-1453, https://doi.org/10.1111/j.1365-246X.2011.05135.x
  
* Fluri, Janis, 2022, Cosmological Parameter Inference with Deep Learning, https://doi.org/10.3929/ethz-b-000540724
+
===2010===
 +
* Awile, O., Demirel, Ö., Sbalzarini, I.F., Toward an Object-Oriented Core of the PPM Library, ''AIP Conf. Proc.'', '''1281''', 1313, (2010), https://doi.org/10.1063/1.3497957
  
* Fomin, Ilya, 2018, Numerical Simulation of Melting and Melt Migration in the Earth’s Mantle, https://doi.org/10.3929/ethz-b-000272763
+
* Eshet, H., Khaliullin, R.Z., Kühne, Th.D., Behler, J., Parrinello, M., Ab Initio Quality Neural-Network Potential for Sodium, ''Phys. Rev. B'', '''81''', 184107, (2010), https://doi.org/10.1103/PhysRevB.81.184107
  
* Fourie, Pieter J., 2017, Data-Driven Transit Simulation, https://doi.org/10.3929/ethz-b-000165298
+
* Khaliullin, R.Z., Eshet, H., Kühne, Th.D., Behler, J., Parrinello, M., Graphite-Diamond Phase Coexistence Study Employing a Neural-Network Mapping of the ''Ab Initio'' Potential Energy Surface, ''Phys. Rev. B'', '''81''', 100103(R), (2010), https://doi.org/10.1103/PhysRevB.81.100103
  
* Gehringer, Stefan, 2021, Influence of Radiative Heat Transfer on NOx and Soot Formation in Large Two-Stroke Marine Diesel Engines, https://doi.org/10.3929/ethz-b-000489745
+
===2008===
 +
* Hytönen, V.P., Vogel, V., How Force Might Activate Talin's Vinculin Binding Sites: SMD Reveals a Structural Mechanism, ''PLoS Comput. Biol.'', '''4(2)''', e24, (2008), https://doi.org/10.1371/journal.pcbi.0040024
  
* Grosheintz-Laval, Luc, 2021, Well-balanced Finite Volume Methods, https://doi.org/10.3929/ethz-b-000505334
+
==Theses referencing HPC clusters or the HPC team==
 +
===Euler===
 +
====PhD theses====
 +
* Bachmann, Björn J., 2018, Engineering Strategies for Sustainable Endothelialization of a New Type of Ventricular Assist Device, https://doi.org/10.3929/ethz-b-000277918
  
* Gruber, Wenzel, 2021, Long-term N2O emission monitoring in biological wastewater treatment: methods, applications and relevance, https://doi.org/10.3929/ethz-b-000537321
+
* Barido-Sottani, Joëlle, 2018, Complex birth-death models for Bayesian phylodynamic inferences, https://doi.org/10.3929/ethz-b-000308809
 +
 
 +
* Bauhofer, Anton, 2019, Multiscale Effects of Photochemical Shrinkage in Direct Laser Writing, https://doi.org/10.3929/ethz-b-000339159
 +
 
 +
* Besta, Maciej, 2021, Enabling High-Performance Large-Scale Irregular Computations, https://doi.org/10.3929/ethz-b-000518644
 +
 
 +
* Bick, Jochen T., 2018, Strategies for Improved RNAseq Data Analysis of Mammalian Species with Incomplete Genome Annotation, https://doi.org/10.3929/ethz-b-000338512
 +
 
 +
* Bieri, Philipp, 2017, Unique Architectural and Evolutionary Features of the Mammalian Mitochondrial and the Plant Chloroplast Ribosome Revealed by Cryo-Electron Microscopy, https://doi.org/10.3929/ethz-b-000202600
 +
 
 +
* Bischoff, Tobias, 2017, Dynamics of the Intertropical Convergence Zone, https://thesis.library.caltech.edu/9981/
 +
 
 +
* Böcklin, Christoph, 2014, Modelling light propagation in Tissue, https://doi.org/10.3929/ethz-a-010387149
 +
 
 +
* Bolis, Vasco, 2019, Optimal Design and Planning of Industrial Waste-to-Energy Networks: A Swiss Case Study, https://doi.org/10.3929/ethz-b-000330770
 +
 
 +
* Bonati, Luigi, 2021, Machine learning and enhanced sampling simulations, https://doi.org/10.3929/ethz-b-000517813
 +
 
 +
* Boskova, Veronika, 2017, Pathogen phylodynamics: better, smarter and faster, https://doi.org/10.3929/ethz-b-000233808
 +
 
 +
* Chaudhry, Sukant, 2021, Surface related uncertainties of laser scanning: a simulation-based and experimental study, https://doi.org/10.3929/ethz-b-000533401
 +
 
 +
* Coulon, Ancelin, 2016, The Drivers of Atmospheric Methane Fluctuations over the Last Three Decades, https://doi.org/10.3929/ethz-b-000170678
 +
 
 +
* Crameri, Simon, 2020, Phylogenomics, Species Discovery and Integrative Taxonomy in Dalbergia (Fabaceae) Precious Woods from Madagascar, https://doi.org/10.3929/ethz-b-000487274
 +
 
 +
* Dal Zilio, Luca, 2019, Cross-scale modeling of mountain building and the seismic cycle: From Alps to Himalaya, https://doi.org/10.3929/ethz-b-000377255
 +
 
 +
* Debnath, Jayashrita, 2022, Rare Event Dynamics, https://doi.org/10.3929/ethz-b-000537320
 +
 
 +
* Ding, Sophia, 2019, Selection Models in the Presence of Networks: Theory and Application for Panel Data, https://doi.org/10.3929/ethz-b-000385927
 +
 
 +
* Dorostkar, Omid, 2018, Stick-slip dynamics in dry and fluid saturated granular fault gouge investigated by numerical simulations, https://doi.org/10.3929/ethz-b-000283977
 +
 
 +
* Du Pasquier, Cosima, 2022, Design, Optimization, and Verification of Pneumatically Actuated Shape-Morphing Lattices, https://doi.org/10.3929/ethz-b-000543889
 +
 
 +
* Du Plessis, Louis, 2016, Understanding the spread and adaptation of infectious diseases using genomic sequencing data, https://doi.org/10.3929/ethz-a-010866338
 +
 
 +
* Dünner, Robert, 2020, Parasite Ping Pong - Host-Parasite Coevolution, Metapopulation Structure and Genetic Diversity, https://doi.org/10.3929/ethz-b-000443380
 +
 
 +
* Esteban Hofer, Laura, 2022, EPR Characterization of Intrinsic Disorder in the RNA-Binding Proteins FUS and SRSF1, https://doi.org/10.3929/ethz-b-000545149
 +
 
 +
* Fagioli, Martina, 2020, Observations and Forward Modeling of Spectroscopic Galaxy Surveys, https://doi.org/10.3929/ethz-b-000451407
 +
 
 +
* Fahrni, Reto, 2021, Reliability-based code calibration for timber in fire, https://doi.org/10.3929/ethz-b-000475057
 +
 
 +
* Florio, Kevin, 2021, Powder Bed Fusion of Ceramic Oxides: Process Development and Process Understanding, https://doi.org/10.3929/ethz-b-000544358
 +
 
 +
* Fluri, Janis, 2022, Cosmological Parameter Inference with Deep Learning, https://doi.org/10.3929/ethz-b-000540724
 +
 
 +
* Fomin, Ilya, 2018, Numerical Simulation of Melting and Melt Migration in the Earth’s Mantle, https://doi.org/10.3929/ethz-b-000272763
 +
 
 +
* Fourie, Pieter J., 2017, Data-Driven Transit Simulation, https://doi.org/10.3929/ethz-b-000165298
 +
 
 +
* Gehringer, Stefan, 2021, Influence of Radiative Heat Transfer on NOx and Soot Formation in Large Two-Stroke Marine Diesel Engines, https://doi.org/10.3929/ethz-b-000489745
 +
 
 +
* Grosheintz-Laval, Luc, 2021, Well-balanced Finite Volume Methods, https://doi.org/10.3929/ethz-b-000505334
 +
 
 +
* Gruber, Wenzel, 2021, Long-term N2O emission monitoring in biological wastewater treatment: methods, applications and relevance, https://doi.org/10.3929/ethz-b-000537321
 +
 
 +
* Hampel, Alexander, 2019, Interplay between structural, electronic, and magnetic properties in rare-earth nickelates, https://doi.org/10.3929/ethz-b-000372219
 +
 
 +
* Hänni, Dominic D., 2020, Cooling Flow Effects on Rotor Heat Transfer Distribution in Highly Loaded Axial Turbines, https://doi.org/10.3929/ethz-b-000470381
 +
 
 +
* Harmanci, Yunus Emre, 2018, Long-Term Resistance of Gradient Anchorage for Prestressed CFRP Strips in Structural Concrete Retrofitting, https://doi.org/10.3929/ethz-b-000329987
 +
 
 +
* Haumann, Alexander, 2016, Southern Ocean response to recent changes in surface freshwater fluxes, https://doi.org/10.3929/ethz-b-000166276
 +
 
 +
* Herbel, Jörg, 2019, A forward-modeling approach to cosmic shear, https://doi.org/10.3929/ethz-b-000392630
 +
 
 +
* Herrmann, Lukas, 2019, Quasi-Monte Carlo Integration in Uncertainty Quantification for PDEs with log-Gaussian Random Field Inputs, https://doi.org/10.3929/ethz-b-000357554
 +
 
 +
* Herrmann, Markus, 2019, Contributions to the Risk Assessment of Natural and Induced Seismicity Producing High-Resolution Catalogs and Improving Risk-Based Decision-Making, https://doi.org/10.3929/ethz-b-000370375
 +
 
 +
* Hofer, Gregor, 2019, The two-dimensional polymerization mechanism of an anthracene-based monomer: A single-crystal-to-single-crystal transformation investigated via total X-ray scattering, https://doi.org/10.3929/ethz-b-000371011
 +
 
 +
* Holdenried-Chernoff, Daria, 2021, The long and short timescale dynamics of planetary magnetic fields, https://doi.org/10.3929/ethz-b-000509840
 +
 
 +
* Huang, Wan Ting Katty, 2018, Aerosol Effects on Climate, with an Emphasis on the Arctic, https://doi.org/10.3929/ethz-b-000319114
 +
 
 +
* Hupp, Daniel, 2018, A Parallel Space-Time Solver for the Navier–Stokes Equations with Periodic Forcing, https://doi.org/10.3929/ethz-b-000309515
 +
 
 +
* Huy Cao Tri, Do, 2022, Computational approaches to inferring individual disease mechanisms in patients with neurological spectrum disorders, https://doi.org/10.3929/ethz-b-000536864
 +
 
 +
* Invernizzi, Michele, 2021, On-the-fly Probability Enhanced Sampling, https://doi.org/10.3929/ethz-b-000474905
 +
 
 +
* Izardar, Ankit, 2022, First-principles investigation of chemical disorder effects on the magnetic properties in L10-FeNi, https://doi.org/10.3929/ethz-b-000551783
 +
 
 +
* Jain, Charitra, 2018, Self-Consistent Generation of Continents and Their Influence on Global Mantle Dynamics, https://doi.org/10.3929/ethz-b-000276316
 +
 
 +
* Jain, Shobhit, 2019, Some Themes in Nonlinear Model Reduction with Applications to Structural Dynamics, https://doi.org/10.3929/ethz-b-000379245
 +
 
 +
* Jordan, Inga, 2017, Attosecond Time-Resolved Photoelectron Spectroscopy of Liquid Systems, https://doi.org/10.3929/ethz-b-000209704
 +
 
 +
* Karisto, Petteri, 2019, Measuring and managing epidemics caused by Zymoseptoria tritici, https://doi.org/10.3929/ethz-b-000374357
 +
 
 +
* Koltukluoglu, Taha Sabri, 2019, Data Assimilation in Computational Hemodynamics, https://doi.org/10.3929/ethz-b-000333691
 +
 
 +
* Kranjčević, Marija, 2019, Multi-Objective Shape Optimization of Radio-Frequency Cavities, https://doi.org/10.3929/ethz-b-000361083
 +
 
 +
* Kromer, Heiko, 2020, Optimization of a compact D-D fast neutron generator for imaging applications, https://doi.org/10.3929/ethz-b-000450395
 +
 
 +
* Kubincová, Alžbeta, 2021, Force field development and adaptive resolution methods for molecular dynamics simulations, https://doi.org/10.3929/ethz-b-000508456
 +
 
 +
* Küchlin, Stephan, 2018, Stochastic Computation of Rarefied Gas Flows Using the Fokker-Planck-DSMC Method: Theory, Algorithms, and Parallel Implementation, https://doi.org/10.3929/ethz-b-000330322
 +
 
 +
* Kuo, Willy, 2019, High resolution 3D functional anatomy database of the kidney, https://www.zora.uzh.ch/id/eprint/201729/10/ZORA201729.pdf
 +
 
 +
* Lafferty, Nathan, 2019, Advancements in two-phase interface tracking CFD simulations with under-resolved interfacial phenomena, https://doi.org/10.3929/ethz-b-000404889
 +
 
 +
* Leonardi, Filippo, 2018, Numerical methods for ensemble based solutions to incompressible flow equations, https://doi.org/10.3929/ethz-b-000296003
 +
 
 +
* Li, Xiaorong, 2021, Fluid Dynamic Modeling of the Coolant Flow in a Nuclear Fuel Rod Bundle, https://doi.org/10.3929/ethz-b-000493228
  
* Hampel, Alexander, 2019, Interplay between structural, electronic, and magnetic properties in rare-earth nickelates, https://doi.org/10.3929/ethz-b-000372219
+
* Liang, Shuyu, 2017, Transient Phosphorus Species in Combustion, https://doi.org/10.3929/ethz-b-000210459
  
* Hänni, Dominic D., 2020, Cooling Flow Effects on Rotor Heat Transfer Distribution in Highly Loaded Axial Turbines, https://doi.org/10.3929/ethz-b-000470381
+
* Lichtenberg, Tim, 2018, Thermal Evolution of Forming Planets: Isotope Enrichment, Differentiation & Volatile Retention, https://doi.org/10.3929/ethz-b-000298059
  
* Harmanci, Yunus Emre, 2018, Long-Term Resistance of Gradient Anchorage for Prestressed CFRP Strips in Structural Concrete Retrofitting, https://doi.org/10.3929/ethz-b-000329987
+
* Liu, Yang, 2016, Ensemble modeling and optimization of bioprocesses under uncertainty, https://doi.org/10.3929/ethz-a-010815836
  
* Haumann, Alexander, 2016, Southern Ocean response to recent changes in surface freshwater fluxes, https://doi.org/10.3929/ethz-b-000166276
+
* Lombardi, Filippo, 2018, Numerical methods for ensemble based solutions to incompressible flow equations, https://doi.org/10.3929/ethz-b-000296003
  
* Herbel, Jörg, 2019, A forward-modeling approach to cosmic shear, https://doi.org/10.3929/ethz-b-000392630
+
* Loosli, Christian, 2020, Numerical and experimental studies for the development of an endothelialized ventricular assist device, https://doi.org/10.3929/ethz-b-000456090
  
* Herrmann, Lukas, 2019, Quasi-Monte Carlo Integration in Uncertainty Quantification for PDEs with log-Gaussian Random Field Inputs, https://doi.org/10.3929/ethz-b-000357554
+
* Macdonald, Duncan S., 2021, Divergent Evolution of an Artificial Carboligase, https://doi.org/10.3929/ethz-b-000471673
  
* Herrmann, Markus, 2019, Contributions to the Risk Assessment of Natural and Induced Seismicity Producing High-Resolution Catalogs and Improving Risk-Based Decision-Making, https://doi.org/10.3929/ethz-b-000370375
+
* Mastrotheodoros, Theodoros, 2019, Ecohydrological sensitivity to climatic variables: dissecting the water tower of Europe, https://doi.org/10.3929/ethz-b-000348653
  
* Hofer, Gregor, 2019, The two-dimensional polymerization mechanism of an anthracene-based monomer: A single-crystal-to-single-crystal transformation investigated via total X-ray scattering, https://doi.org/10.3929/ethz-b-000371011
+
* Meier, Quintin N., 2019, First-principles-based modelling of improper ferroelectricity, https://doi.org/10.3929/ethz-b-000432220
  
* Holdenried-Chernoff, Daria, 2021, The long and short timescale dynamics of planetary magnetic fields, https://doi.org/10.3929/ethz-b-000509840
+
* Meyer, Bettina, 2017, Boundary-Layer Turbulence and Clouds in the Atmosphere: Prospects for Closures, https://doi.org/10.3929/ethz-b-000292267
  
* Huang, Wan Ting Katty, 2018, Aerosol Effects on Climate, with an Emphasis on the Arctic, https://doi.org/10.3929/ethz-b-000319114
+
* Miho, Enkelejda, 2017, Discovering Fundamental Principles of Antibody Repertoires by Large-Scale Systems and Network Analysis, https://doi.org/10.3929/ethz-b-000199101
  
* Hupp, Daniel, 2018, A Parallel Space-Time Solver for the Navier–Stokes Equations with Periodic Forcing, https://doi.org/10.3929/ethz-b-000309515
+
* Mikelson, Jan, 2019, Nested Sampling for biochemical reaction networks with applications to ERK signalling: A likelihood-free approach, https://doi.org/10.3929/ethz-b-000375988
  
* Huy Cao Tri, Do, 2022, Computational approaches to inferring individual disease mechanisms in patients with neurological spectrum disorders, https://doi.org/10.3929/ethz-b-000536864
+
* Milanese, Alessio, 2020, Advancing taxonomic annotation and profiling of microbial communities using marker genes, https://doi.org/10.3929/ethz-b-000479809
  
* Invernizzi, Michele, 2021, On-the-fly Probability Enhanced Sampling, https://doi.org/10.3929/ethz-b-000474905
+
* Milella, Federico, 2020, Post-combustion Carbon Capture - Toward the Integration of Cooling Crystallization into Ammonia-based Processes, https://doi.org/10.3929/ethz-b-000414786
  
* Jain, Charitra, 2018, Self-Consistent Generation of Continents and Their Influence on Global Mantle Dynamics, https://doi.org/10.3929/ethz-b-000276316
+
* Milic, Jovana, 2017, Photoredox-Switchable Molecular Grippers, https://doi.org/10.3929/ethz-b-000174071
  
* Jain, Shobhit, 2019, Some Themes in Nonlinear Model Reduction with Applications to Structural Dynamics, https://doi.org/10.3929/ethz-b-000379245
+
* Mittelviefhaus, Moritz, 2022, Optimal Multi-Energy Hub Design & Operation: Addressing the Trilemma of Decarbonization, Costs and Security of Supply, https://doi.org/10.3929/ethz-b-000541131
  
* Jordan, Inga, 2017, Attosecond Time-Resolved Photoelectron Spectroscopy of Liquid Systems, https://doi.org/10.3929/ethz-b-000209704
+
* Mitov, Venelin, 2018, Phylogenetic Comparative Methods in the Era of Big Data, https://doi.org/10.3929/ethz-b-000315296
  
* Karisto, Petteri, 2019, Measuring and managing epidemics caused by Zymoseptoria tritici, https://doi.org/10.3929/ethz-b-000374357
+
* Mosbacher, Maximilian, 2021, Insights into yeast MAPK signaling dynamics using mechanistic modeling, https://doi.org/10.3929/ethz-b-000505465
  
* Koltukluoglu, Taha Sabri, 2019, Data Assimilation in Computational Hemodynamics, https://doi.org/10.3929/ethz-b-000333691
+
* Mylonas, Charilaos, 2021, Machine Learning for Structural Health Assessment under Uncertainty with applications in Wind Energy, https://doi.org/10.3929/ethz-b-000511551
  
* Kranjčević, Marija, 2019, Multi-Objective Shape Optimization of Radio-Frequency Cavities, https://doi.org/10.3929/ethz-b-000361083
+
* Nissen, Cara, 2019, Southern Ocean phytoplankton biogeography: Controlling factors and implications for biogeochemistry, https://doi.org/10.3929/ethz-b-000351758
  
* Kromer, Heiko, 2020, Optimization of a compact D-D fast neutron generator for imaging applications, https://doi.org/10.3929/ethz-b-000450395
+
* Nunez-Jimenez, Alejandro, 2020, Energy policy for the transition: Designing policies for harnessing technological change, https://doi.org/10.3929/ethz-b-000447262
  
* Kubincová, Alžbeta, 2021, Force field development and adaptive resolution methods for molecular dynamics simulations, https://doi.org/10.3929/ethz-b-000508456
+
* Nützi, Gabriel, 2016, Non-Smooth Granular Rigid Body Dynamics with Applications to Chute Flows, https://doi.org/10.3929/ethz-a-010662262
  
* Küchlin, Stephan, 2018, Stochastic Computation of Rarefied Gas Flows Using the Fokker-Planck-DSMC Method: Theory, Algorithms, and Parallel Implementation, https://doi.org/10.3929/ethz-b-000330322
+
* Oldenburg, Fabio J., 2019, Membrane Design Towards Improved Vanadium Redox Flow Batteries, https://doi.org/10.3929/ethz-b-000371207
  
* Lafferty, Nathan, 2019, Advancements in two-phase interface tracking CFD simulations with under-resolved interfacial phenomena, https://doi.org/10.3929/ethz-b-000404889
+
* Olsen, Gerhard Henning, 2016, Ferroelectric Tungsten Bronzes, https://ntnuopen.ntnu.no/ntnu-xmlui/bitstream/handle/11250/2416836/Gerhard%20Henning%20OlsenPhD.pdf
  
* Leonardi, Filippo, 2018, Numerical methods for ensemble based solutions to incompressible flow equations, https://doi.org/10.3929/ethz-b-000296003
+
* Pais, Duarte, 2021, Development of the caesium magnetometer array for the n2EDM experiment, https://doi.org/10.3929/ethz-b-000511496
  
* Li, Xiaorong, 2021, Fluid Dynamic Modeling of the Coolant Flow in a Nuclear Fuel Rod Bundle, https://doi.org/10.3929/ethz-b-000493228
+
* Petkov, Ivalin, 2022, Optimal decarbonization conditions for buildings & districts: a model-based techno-economic perspective, https://doi.org/10.3929/ethz-b-000549061
  
* Liang, Shuyu, 2017, Transient Phosphorus Species in Combustion, https://doi.org/10.3929/ethz-b-000210459
+
* Pikulski, Marek, 2017, Field-induced chirality in a frustrated quantum spin ladder, https://doi.org/10.3929/ethz-b-000204120
  
* Lichtenberg, Tim, 2018, Thermal Evolution of Forming Planets: Isotope Enrichment, Differentiation & Volatile Retention, https://doi.org/10.3929/ethz-b-000298059
+
* Pintarelli, Simon, 2018, Deterministic Numerical Methods for the Boltzmann Equation, https://doi.org/10.3929/ethz-b-000317127
  
* Liu, Yang, 2016, Ensemble modeling and optimization of bioprocesses under uncertainty, https://doi.org/10.3929/ethz-a-010815836
+
* Pollice, Robert, 2019, London Dispersion in Molecular Systems, https://doi.org/10.3929/ethz-b-000371736
  
* Lombardi, Filippo, 2018, Numerical methods for ensemble based solutions to incompressible flow equations, https://doi.org/10.3929/ethz-b-000296003
+
* Preuss, Simon, 2020, Seismic cycle modeling on evolving strike-slip faults, https://doi.org/10.3929/ethz-b-000467246
  
* Loosli, Christian, 2020, Numerical and experimental studies for the development of an endothelialized ventricular assist device, https://doi.org/10.3929/ethz-b-000456090
+
* Remondi, Federica, 2018, Hydrological modelling and water flux tracking to quantify controls on water transit and residence time, https://doi.org/10.3929/ethz-b-000305927
  
* Macdonald, Duncan S., 2021, Divergent Evolution of an Artificial Carboligase, https://doi.org/10.3929/ethz-b-000471673
+
* Rigling, Carla, 2018, Conformational Analysis of Peptides using RDC-enhanced NMR Spectroscopy, https://doi.org/10.3929/ethz-b-000282575
  
* Mastrotheodoros, Theodoros, 2019, Ecohydrological sensitivity to climatic variables: dissecting the water tower of Europe, https://doi.org/10.3929/ethz-b-000348653
+
* Rindlisbacher, Tobias, 2017, Lattice Field Theory at Finite Density, https://doi.org/10.3929/ethz-b-000167730
  
* Meier, Quintin N., 2019, First-principles-based modelling of improper ferroelectricity, https://doi.org/10.3929/ethz-b-000432220
+
* Rodríguez-Ros, Pablo, 2020, Modelling of isoprene distribution and cycling in the ocean , https://digital.csic.es/bitstream/10261/218879/1/Rodriguez_Ros_Thesis_2020.pdf
  
* Meyer, Bettina, 2017, Boundary-Layer Turbulence and Clouds in the Atmosphere: Prospects for Closures, https://doi.org/10.3929/ethz-b-000292267
+
* Sakellarakis, Vasileios David, 2020, Mixing and Autoignition of Underexpanded Methane Jets at High Pressure Conditions, https://doi.org/10.3929/ethz-b-000474652
  
* Miho, Enkelejda, 2017, Discovering Fundamental Principles of Antibody Repertoires by Large-Scale Systems and Network Analysis, https://doi.org/10.3929/ethz-b-000199101
+
* Saletti, Matteo, 2016, Modelling step formation and collapse in steep streams, https://doi.org/10.3929/ethz-a-010781515
  
* Mikelson, Jan, 2019, Nested Sampling for biochemical reaction networks with applications to ERK signalling: A likelihood-free approach, https://doi.org/10.3929/ethz-b-000375988
+
* Schaack, Cédric P., 2018, Helicene Dimers and Oligomers: Novel Chiral Chromo- and Fluorophoric Materials, https://doi.org/10.3929/ethz-b-000330449
  
* Milanese, Alessio, 2020, Advancing taxonomic annotation and profiling of microbial communities using marker genes, https://doi.org/10.3929/ethz-b-000479809
+
* Schöbi, Dario, 2020, Dynamic causal models for inference on neuromodulatory processes in neural circuits, https://doi.org/10.3929/ethz-b-000429311
  
* Milella, Federico, 2020, Post-combustion Carbon Capture - Toward the Integration of Cooling Crystallization into Ammonia-based Processes, https://doi.org/10.3929/ethz-b-000414786
+
* Schwab, Anatol, 2017, Allosteric Inhibitors of the Enzyme IspD of the Non-Mevalonate Pathway for Isoprenoid Biosynthesis, https://doi.org/10.3929/ethz-b-000216917
  
* Milic, Jovana, 2017, Photoredox-Switchable Molecular Grippers, https://doi.org/10.3929/ethz-b-000174071
+
* Serra-Garcia, Marc, 2017, Engineering Nonlinearity in Low-Dimensional Systems for Energy Conversion, https://doi.org/10.3929/ethz-b-000237475
  
* Mittelviefhaus, Moritz, 2022, Optimal Multi-Energy Hub Design & Operation: Addressing the Trilemma of Decarbonization, Costs and Security of Supply, https://doi.org/10.3929/ethz-b-000541131
+
* Sferrazza, Carmelo, 2022, A general framework for high-resolution robotic tactile sensing: design, simulation, and learning, https://doi.org/10.3929/ethz-b-000541127
  
* Mitov, Venelin, 2018, Phylogenetic Comparative Methods in the Era of Big Data, https://doi.org/10.3929/ethz-b-000315296
+
* Sukhodolov, Timofei, 2016, Study of the middle atmosphere response to short-term solar variability, https://doi.org/10.3929/ethz-a-010684145
  
* Mosbacher, Maximilian, 2021, Insights into yeast MAPK signaling dynamics using mechanistic modeling, https://doi.org/10.3929/ethz-b-000505465
+
* Tabibi, Sonia, 2019, A bio-inspired coding (BIC) strategy for cochlear implants, https://doi.org/10.3929/ethz-b-000380868
  
* Mylonas, Charilaos, 2021, Machine Learning for Structural Health Assessment under Uncertainty with applications in Wind Energy, https://doi.org/10.3929/ethz-b-000511551
+
* Taddio, Marco F., 2019, Targeting CD80 for Non-Invasive Imaging of Immunogenicity by PET, https://doi.org/10.3929/ethz-b-000343444
  
* Nissen, Cara, 2019, Southern Ocean phytoplankton biogeography: Controlling factors and implications for biogeochemistry, https://doi.org/10.3929/ethz-b-000351758
+
* Tirla, Alina, 2019, Development of Photoactivatable Phosphines for the Induction of Reductive Stress and Peptides for Subcellular Targeting, https://doi.org/10.3929/ethz-b-000370541
  
* Nunez-Jimenez, Alejandro, 2020, Energy policy for the transition: Designing policies for harnessing technological change, https://doi.org/10.3929/ethz-b-000447262
+
* Tortorelli, Luca, 2021, The Measurement of Galaxy Population properties with Forward-Modelling and Approximate Bayesian Computation, https://doi.org/10.3929/ethz-b-000510367
  
* Nützi, Gabriel, 2016, Non-Smooth Granular Rigid Body Dynamics with Applications to Chute Flows, https://doi.org/10.3929/ethz-a-010662262
+
* Tröndle, Tim, 2020, Renewable electricity for all: Untangling conflicts about where to build Europe’s future supply infrastructure, https://doi.org/10.3929/ethz-b-000437381
  
* Oldenburg, Fabio J., 2019, Membrane Design Towards Improved Vanadium Redox Flow Batteries, https://doi.org/10.3929/ethz-b-000371207
+
* Tschager, Thomas, 2018, Algorithms for Peptide Identification via Tandem Mass Spectrometry, https://doi.org/10.3929/ethz-b-000259599
  
* Olsen, Gerhard Henning, 2016, Ferroelectric Tungsten Bronzes, https://ntnuopen.ntnu.no/ntnu-xmlui/bitstream/handle/11250/2416836/Gerhard%20Henning%20OlsenPhD.pdf
+
* von Conta, Aaron, 2018, Time-Resolved XUV Photoelectron Spectroscopy of Molecular Dynamics using a Monochromatized High-Harmonic Source, https://doi.org/10.3929/ethz-b-000237508
  
* Pais, Duarte, 2021, Development of the caesium magnetometer array for the n2EDM experiment, https://doi.org/10.3929/ethz-b-000511496
+
* Voulpiotis, Konstantinos, 2021, Robustness of Tall Timber Buildings, https://doi.org/10.3929/ethz-b-000526211
  
* Pikulski, Marek, 2017, Field-induced chirality in a frustrated quantum spin ladder, https://doi.org/10.3929/ethz-b-000204120
+
* Wang, Dahong, 2020, Simulation and Optimization Methods to Design Distributed Energy Systems with Thermal Networks, https://doi.org/10.3929/ethz-b-000476972
  
* Pintarelli, Simon, 2018, Deterministic Numerical Methods for the Boltzmann Equation, https://doi.org/10.3929/ethz-b-000317127
+
* Wang, Wuyan, 2018, Starch: from metabolism to utilization in orphan crops, https://doi.org/10.3929/ethz-b-000271557
  
* Pollice, Robert, 2019, London Dispersion in Molecular Systems, https://doi.org/10.3929/ethz-b-000371736
+
* Weiss, Philipp, 2021, On droplets that cluster and evaporate in turbulence - Insights from direct numerical simulations, https://doi.org/10.3929/ethz-b-000501073
  
* Preuss, Simon, 2020, Seismic cycle modeling on evolving strike-slip faults, https://doi.org/10.3929/ethz-b-000467246
+
* Yang, Simon, 2017, Dynamics of the contemporary marine nitrogen cycle, https://doi.org/10.3929/ethz-b-000165715
  
* Remondi, Federica, 2018, Hydrological modelling and water flux tracking to quantify controls on water transit and residence time, https://doi.org/10.3929/ethz-b-000305927
+
* Zhang, Chi, 2021, Scalable technologies for surfaceelectrode ion traps, https://doi.org/10.3929/ethz-b-000536415
  
* Rigling, Carla, 2018, Conformational Analysis of Peptides using RDC-enhanced NMR Spectroscopy, https://doi.org/10.3929/ethz-b-000282575
+
* Zhang, Xiyue, 2018, Dynamics of Resolved Polar Clouds, https://thesis.library.caltech.edu/10989/
  
* Rindlisbacher, Tobias, 2017, Lattice Field Theory at Finite Density, https://doi.org/10.3929/ethz-b-000167730
+
* Zhong, Xin, 2017, Numerical modelling of grainscale pressure variations in metamorphic rocks: interplay between mineral reactions, diffusion and mechanical deformation, https://doi.org/10.3929/ethz-b-000224597
  
* Rodríguez-Ros, Pablo, 2020, Modelling of isoprene distribution and cycling in the ocean , https://digital.csic.es/bitstream/10261/218879/1/Rodriguez_Ros_Thesis_2020.pdf
+
* Zoller, Stefan, 2020, A 50 kW Solar Thermochemical Reactor for Syngas Production Utilizing Porous Ceria Structures, https://doi.org/10.3929/ethz-b-000426499
  
* Sakellarakis, Vasileios David, 2020, Mixing and Autoignition of Underexpanded Methane Jets at High Pressure Conditions, https://doi.org/10.3929/ethz-b-000474652
+
====Master theses====
 +
* Accaputo, Giuseppe, 2017, Solving Large Scale Eigenvalue Problems in Amorphous Materials, https://doi.org/10.3929/ethz-b-000221499
  
* Saletti, Matteo, 2016, Modelling step formation and collapse in steep streams, https://doi.org/10.3929/ethz-a-010781515
+
* Arrigoni, Riccardo, 2020, Uncertainty propagation and sensitivity analysis in hydrology, https://ethz.ch/content/dam/ethz/special-interest/baug/ibk/risk-safety-and-uncertainty-dam/publications/master-theses/master-thesis-pages/rarrigoni_MSc.pdf
  
* Schaack, Cédric P., 2018, Helicene Dimers and Oligomers: Novel Chiral Chromo- and Fluorophoric Materials, https://doi.org/10.3929/ethz-b-000330449
+
* Bachmann, Michael, 2021, Deep Learning for Smartphone-based Cough Detection, https://pub.tik.ee.ethz.ch/students/2021-HS/MA-2021-64.pdf
  
* Schöbi, Dario, 2020, Dynamic causal models for inference on neuromodulatory processes in neural circuits, https://doi.org/10.3929/ethz-b-000429311
+
* Cărbune, Victor, 2014, Active Learning for Source Localization, https://doi.org/10.3929/ethz-a-010144433
  
* Schwab, Anatol, 2017, Allosteric Inhibitors of the Enzyme IspD of the Non-Mevalonate Pathway for Isoprenoid Biosynthesis, https://doi.org/10.3929/ethz-b-000216917
+
* Erne, Simon, 2021, Occupancy forecasting for building energy MPC, https://doi.org/10.3929/ethz-b-000505594
  
* Serra-Garcia, Marc, 2017, Engineering Nonlinearity in Low-Dimensional Systems for Energy Conversion, https://doi.org/10.3929/ethz-b-000237475
+
* Gächter, Marius, 2021, Streamlining a Cold-Atom Experiment, https://doi.org/10.3929/ethz-b-000504567
  
* Sferrazza, Carmelo, 2022, A general framework for high-resolution robotic tactile sensing: design, simulation, and learning, https://doi.org/10.3929/ethz-b-000541127
+
* Haagmans, Vincent, 2021, Modelling the significance of snow-vegetation interactions for active layer dynamics in an Arctic permafrost region subjected to tundra shrubification, https://doi.org/10.3929/ethz-b-000518127
  
* Sukhodolov, Timofei, 2016, Study of the middle atmosphere response to short-term solar variability, https://doi.org/10.3929/ethz-a-010684145
+
* Halvorsen, Jon Christian, 2016, https://ntnuopen.ntnu.no/ntnu-xmlui/handle/11250/2395879
  
* Tabibi, Sonia, 2019, A bio-inspired coding (BIC) strategy for cochlear implants, https://doi.org/10.3929/ethz-b-000380868
+
* Haslebacher, Raphael, 2018, Intermodal Routing in MATSim Applied to SBB Green Class, https://doi.org/10.3929/ethz-b-000312897
 
 
* Taddio, Marco F., 2019, Targeting CD80 for Non-Invasive Imaging of Immunogenicity by PET, https://doi.org/10.3929/ethz-b-000343444
 
 
 
* Tirla, Alina, 2019, Development of Photoactivatable Phosphines for the Induction of Reductive Stress and Peptides for Subcellular Targeting, https://doi.org/10.3929/ethz-b-000370541
 
 
 
* Tortorelli, Luca, 2021, The Measurement of Galaxy Population properties with Forward-Modelling and Approximate Bayesian Computation, https://doi.org/10.3929/ethz-b-000510367
 
 
 
* Tröndle, Tim, 2020, Renewable electricity for all: Untangling conflicts about where to build Europe’s future supply infrastructure, https://doi.org/10.3929/ethz-b-000437381
 
 
 
* Tschager, Thomas, 2018, Algorithms for Peptide Identification via Tandem Mass Spectrometry, https://doi.org/10.3929/ethz-b-000259599
 
 
 
* von Conta, Aaron, 2018, Time-Resolved XUV Photoelectron Spectroscopy of Molecular Dynamics using a Monochromatized High-Harmonic Source, https://doi.org/10.3929/ethz-b-000237508
 
 
 
* Voulpiotis, Konstantinos, 2021, Robustness of Tall Timber Buildings, https://doi.org/10.3929/ethz-b-000526211
 
 
 
* Wang, Wuyan, 2018, Starch: from metabolism to utilization in orphan crops, https://doi.org/10.3929/ethz-b-000271557
 
 
 
* Weiss, Philipp, 2021, On droplets that cluster and evaporate in turbulence - Insights from direct numerical simulations, https://doi.org/10.3929/ethz-b-000501073
 
 
 
* Yang, Simon, 2017, Dynamics of the contemporary marine nitrogen cycle, https://doi.org/10.3929/ethz-b-000165715
 
 
 
* Zhang, Chi, 2021, Scalable technologies for surfaceelectrode ion traps, https://doi.org/10.3929/ethz-b-000536415
 
 
 
* Zhang, Xiyue, 2018, Dynamics of Resolved Polar Clouds, https://thesis.library.caltech.edu/10989/
 
 
 
* Zhong, Xin, 2017, Numerical modelling of grainscale pressure variations in metamorphic rocks: interplay between mineral reactions, diffusion and mechanical deformation, https://doi.org/10.3929/ethz-b-000224597
 
 
 
* Zoller, Stefan, 2020, A 50 kW Solar Thermochemical Reactor for Syngas Production Utilizing Porous Ceria Structures, https://doi.org/10.3929/ethz-b-000426499
 
 
 
====Master theses====
 
* Accaputo, Giuseppe, 2017, Solving Large Scale Eigenvalue Problems in Amorphous Materials, https://doi.org/10.3929/ethz-b-000221499
 
 
 
* Cărbune, Victor, 2014, Active Learning for Source Localization, https://doi.org/10.3929/ethz-a-010144433
 
 
 
* Erne, Simon, 2021, Occupancy forecasting for building energy MPC, https://doi.org/10.3929/ethz-b-000505594
 
 
 
* Gächter, Marius, 2021, Streamlining a Cold-Atom Experiment, https://doi.org/10.3929/ethz-b-000504567
 
 
 
* Haagmans, Vincent, 2021, Modelling the significance of snow-vegetation interactions for active layer dynamics in an Arctic permafrost region subjected to tundra shrubification, https://doi.org/10.3929/ethz-b-000518127
 
  
* Halvorsen, Jon Christian, 2016, https://ntnuopen.ntnu.no/ntnu-xmlui/handle/11250/2395879
+
* Häusler, Marco, 2016, 36 Component Seismic Data: Investigating Translational and Rotational Components in Exploration Seismology, https://doi.org/10.3929/ethz-b-000273384
  
* Haslebacher, Raphael, 2018, Intermodal Routing in MATSim Applied to SBB Green Class, https://doi.org/10.3929/ethz-b-000312897
+
* Hippke, Holger, 2016, Analysis of advanced material models for complex industrial processes, https://doi.org/10.3929/ethz-b-000378224
  
* Kohler, Manuel Christoph, Soft Error Resilient Time Stepping Schemes on Regular Grids, https://doi.org/10.3929/ethz-a-010583223
+
* Kohler, Manuel Christoph, 2016, Soft Error Resilient Time Stepping Schemes on Regular Grids, https://doi.org/10.3929/ethz-a-010583223
  
 
* Koutsoukos, Dimitrios, 2019, Producing building blocks for data analytics, https://doi.org/10.3929/ethz-b-000409593
 
* Koutsoukos, Dimitrios, 2019, Producing building blocks for data analytics, https://doi.org/10.3929/ethz-b-000409593
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* Lebovitz, Lukas, 2017, Modelling and Time-Resolved Numerical Simulations of Urban Turbulent Wind Flows Around Buildings, https://doi.org/10.3929/ethz-b-000186343
 
* Lebovitz, Lukas, 2017, Modelling and Time-Resolved Numerical Simulations of Urban Turbulent Wind Flows Around Buildings, https://doi.org/10.3929/ethz-b-000186343
  
* Martini, Lorenzo, Performance implications of a Dataflow System’s Communication Plane, https://doi.org/10.3929/ethz-b-000338594
+
* Martini, Lorenzo, 2019, Performance implications of a Dataflow System’s Communication Plane, https://doi.org/10.3929/ethz-b-000338594
  
 
* Möller, Simon, 2016, The Impact of the Tree Prior and Purifying Selection on Estimating Clock Rates During Viral Epidemics, https://doi.org/10.3929/ethz-b-000184546
 
* Möller, Simon, 2016, The Impact of the Tree Prior and Purifying Selection on Estimating Clock Rates During Viral Epidemics, https://doi.org/10.3929/ethz-b-000184546
Line 2,031: Line 2,373:
  
 
* Ni, Chao, 2021, Learning to Walk over Structured Terrains by Imitating MPC, https://doi.org/10.3929/ethz-b-000534876
 
* Ni, Chao, 2021, Learning to Walk over Structured Terrains by Imitating MPC, https://doi.org/10.3929/ethz-b-000534876
 +
 +
* Panagiotaki, Efimia, 2017, An Efficient Track Detection and Mapping System for Autonomous Driving Race Car - Formula Student Driverless, https://dspace.lib.ntua.gr/xmlui/bitstream/handle/123456789/46773/Diplwmatiki_Efimia_Panagiotaki.pdf
  
 
* Pelzmann, Nicolas, 2021, Distributed Suboptimal Model Predictive Control for Smart Buildings, https://doi.org/10.3929/ethz-b-000510848
 
* Pelzmann, Nicolas, 2021, Distributed Suboptimal Model Predictive Control for Smart Buildings, https://doi.org/10.3929/ethz-b-000510848
Line 2,041: Line 2,385:
  
 
* Somody, Joseph C., 2015, Exploring the role of amino-acid alphabets in protein-interface classification, https://doi.org/10.3929/ethz-a-010415857
 
* Somody, Joseph C., 2015, Exploring the role of amino-acid alphabets in protein-interface classification, https://doi.org/10.3929/ethz-a-010415857
 +
 +
* Valcamonico, Dario, 2018, Cooperative Coevolution Approach to Multi-Community Resilience Design, https://www.politesi.polimi.it/handle/10589/142383?mode=complete
  
 
* Wang, Mengdi, 2022, Exploration of Deep Features for Neural Style Transfer, https://doi.org/10.3929/ethz-b-000544915
 
* Wang, Mengdi, 2022, Exploration of Deep Features for Neural Style Transfer, https://doi.org/10.3929/ethz-b-000544915
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====Bachelor theses====
 
====Bachelor theses====
 
* Frey, Daniel, 2020, Implementation of Maurer’s method for prime generation, https://ethz.ch/content/dam/ethz/special-interest/infk/inst-infsec/appliedcrypto/education/theses/Daniel_Frey_Bachelor_Thesis.pdf
 
* Frey, Daniel, 2020, Implementation of Maurer’s method for prime generation, https://ethz.ch/content/dam/ethz/special-interest/infk/inst-infsec/appliedcrypto/education/theses/Daniel_Frey_Bachelor_Thesis.pdf
 +
 +
* Nguyen, Tung, 2021, Evolutionary Methods for Sequences, https://pub.tik.ee.ethz.ch/students/2021-FS/BA-2021-19.pdf
  
 
* Rimle, Philipp, 2016, Ranking Alternatives Online, https://pub.tik.ee.ethz.ch/students/2016-FS/BA-2016-07.pdf
 
* Rimle, Philipp, 2016, Ranking Alternatives Online, https://pub.tik.ee.ethz.ch/students/2016-FS/BA-2016-07.pdf
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===Leonhard Open===
 
===Leonhard Open===
 
====PhD theses====
 
====PhD theses====
* Alexeev, Dmitry, 2019 High Performance Computing For Microfluidics On Graphics Processing Units, https://doi.org/10.3929/ethz-b-000378877
+
* Alexeev, Dmitry, 2019, High Performance Computing For Microfluidics On Graphics Processing Units, https://doi.org/10.3929/ethz-b-000378877
  
 
* Crysnanto, Danang, 2021, Establishing Bovine Pangenome Graphs, https://doi.org/10.3929/ethz-b-000510180
 
* Crysnanto, Danang, 2021, Establishing Bovine Pangenome Graphs, https://doi.org/10.3929/ethz-b-000510180
Line 2,074: Line 2,422:
 
* Friedensohn, Simon, 2020, Mining the sequence space of antibody repertoires to predict and design antigen-specific antibodies, https://doi.org/10.3929/ethz-b-000454740
 
* Friedensohn, Simon, 2020, Mining the sequence space of antibody repertoires to predict and design antigen-specific antibodies, https://doi.org/10.3929/ethz-b-000454740
  
* Hösl, Andreas, Analysis of Electron Detachment in Pulsed Townsend Measurements, https://doi.org/10.3929/ethz-b-000361953
+
* Hösl, Andreas, 2019, Analysis of Electron Detachment in Pulsed Townsend Measurements, https://doi.org/10.3929/ethz-b-000361953
  
 
* Huisman, Berend J.H., 2021, Development of a microfluidic platform for de-novo drug design, https://doi.org/10.3929/ethz-b-000491060
 
* Huisman, Berend J.H., 2021, Development of a microfluidic platform for de-novo drug design, https://doi.org/10.3929/ethz-b-000491060
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* Bludau, Isabell, 2019, Towards proteoform-resolved analysis of macromolecular protein complex assemblies by mass spectrometry, https://doi.org/10.3929/ethz-b-000354443
 
* Bludau, Isabell, 2019, Towards proteoform-resolved analysis of macromolecular protein complex assemblies by mass spectrometry, https://doi.org/10.3929/ethz-b-000354443
 +
 +
* Blülle, Balthasar, 2016, Measured and simulated bulk and interface charge transport in organic molecular crystals, https://doi.org/10.3929/ethz-a-010718150
  
 
* Böcklin, Christoph, 2014, Modelling light propagation in Tissue, https://doi.org/10.3929/ethz-a-010387149
 
* Böcklin, Christoph, 2014, Modelling light propagation in Tissue, https://doi.org/10.3929/ethz-a-010387149
Line 2,145: Line 2,495:
  
 
* Dorostkar, Omid, 2018, Stick-slip dynamics in dry and fluid saturated granular fault gouge investigated by numerical simulations, https://doi.org/10.3929/ethz-b-000283977
 
* Dorostkar, Omid, 2018, Stick-slip dynamics in dry and fluid saturated granular fault gouge investigated by numerical simulations, https://doi.org/10.3929/ethz-b-000283977
 +
 +
* du Plessis, Louis, 2016, Understanding the spread and adaptation of infectious diseases using genomic sequencing data, https://doi.org/10.3929/ethz-a-010866338
  
 
* Dumele, Oliver Chris, 2015, Halogen Bonding Interactions: From Monodentate Model Systems to Multidentate Supramolecular Capsules, https://doi.org/10.3929/ethz-a-010593992
 
* Dumele, Oliver Chris, 2015, Halogen Bonding Interactions: From Monodentate Model Systems to Multidentate Supramolecular Capsules, https://doi.org/10.3929/ethz-a-010593992
Line 2,160: Line 2,512:
 
* Gawel, Przemyslaw, 2015, Functional cumulene-based synthetic molecular materials, https://doi.org/10.3929/ethz-a-010540277
 
* Gawel, Przemyslaw, 2015, Functional cumulene-based synthetic molecular materials, https://doi.org/10.3929/ethz-a-010540277
  
* Grella Konstantin, 2013, Sparse tensor approximation for radiative transport, https://doi.org/10.3929/ethz-a-009970281
+
* Grella, Konstantin, 2013, Sparse tensor approximation for radiative transport, https://doi.org/10.3929/ethz-a-009970281
  
 
* Grommek, Andreas, 2012, Polymorphism in the ccβ model amyloid investigated by solid-state NMR and prediction of carbon chemical shifts of proteins by DFT calculations, https://doi.org/10.3929/ethz-a-007558057
 
* Grommek, Andreas, 2012, Polymorphism in the ccβ model amyloid investigated by solid-state NMR and prediction of carbon chemical shifts of proteins by DFT calculations, https://doi.org/10.3929/ethz-a-007558057
Line 2,241: Line 2,593:
  
 
* Nützi, Gabriel, 2016, Non-Smooth Granular Rigid Body Dynamics with Applications to Chute Flows, https://doi.org/10.3929/ethz-a-010662262
 
* Nützi, Gabriel, 2016, Non-Smooth Granular Rigid Body Dynamics with Applications to Chute Flows, https://doi.org/10.3929/ethz-a-010662262
 +
 +
* Palma, Pedro, 2016, Fire behaviour of timber connections, https://doi.org/10.3929/ethz-a-010836621
  
 
* Pauli, Stefan Marc, 2014, Fault Tolerance in Multilevel Monte Carlo Methods, https://doi.org/10.3929/ethz-a-010477234
 
* Pauli, Stefan Marc, 2014, Fault Tolerance in Multilevel Monte Carlo Methods, https://doi.org/10.3929/ethz-a-010477234
Line 2,263: Line 2,617:
  
 
* Rolf, Tobias, 2013, The role of continents in the global evolution of mantle convection and plate tectonics, https://doi.org/10.3929/ethz-a-010060651
 
* Rolf, Tobias, 2013, The role of continents in the global evolution of mantle convection and plate tectonics, https://doi.org/10.3929/ethz-a-010060651
 +
 +
* Rosenberger, George A., 2016, Multi-level proteome characterization using high resolution mass spectrometry, https://doi.org/10.3929/ethz-a-010742448
  
 
* Schaack, Cédric P., 2018, Helicene Dimers and Oligomers: Novel Chiral Chromo- and Fluorophoric Materials, https://doi.org/10.3929/ethz-b-000330449
 
* Schaack, Cédric P., 2018, Helicene Dimers and Oligomers: Novel Chiral Chromo- and Fluorophoric Materials, https://doi.org/10.3929/ethz-b-000330449
Line 2,274: Line 2,630:
 
* Schmid, Nathan, 2011, Development and application of efficient, object-oriented software for simulation and structure refinement of biomolecules, https://doi.org/10.3929/ethz-a-006576462
 
* Schmid, Nathan, 2011, Development and application of efficient, object-oriented software for simulation and structure refinement of biomolecules, https://doi.org/10.3929/ethz-a-006576462
  
* Schuler, Martin J., Fundamental Investigations of Supercritical Water Flows for Hydrothermal Spallation Drilling, https://doi.org/10.3929/ethz-a-010198376
+
* Schuler, Martin J., 2014, Fundamental Investigations of Supercritical Water Flows for Hydrothermal Spallation Drilling, https://doi.org/10.3929/ethz-a-010198376
  
 
* Schweizer, Marco, 2015, Brownian and Nonisothermal Effects in Nucleation Theory: Towards Systematic Multiscale Modeling, https://doi.org/10.3929/ethz-a-010523147
 
* Schweizer, Marco, 2015, Brownian and Nonisothermal Effects in Nucleation Theory: Towards Systematic Multiscale Modeling, https://doi.org/10.3929/ethz-a-010523147
Line 2,336: Line 2,692:
  
 
* Pečerska, Jūlija, 2015, Large-scale Prediction and Functional Analysis of Tandem Repeats in Proteomes of Diverse Organisms, https://doi.org/10.3929/ethz-a-010475969
 
* Pečerska, Jūlija, 2015, Large-scale Prediction and Functional Analysis of Tandem Repeats in Proteomes of Diverse Organisms, https://doi.org/10.3929/ethz-a-010475969
 +
 +
* Philipp, Daniel, 2015, Influence of LPPL traders on financial markets, https://ethz.ch/content/dam/ethz/special-interest/mtec/chair-of-entrepreneurial-risks-dam/documents/dissertation/master%20thesis/MA_D%20Philipp_updated_final%20(002).pdf
  
 
* Philippe, Thomas, 2013, Single viscous layer fold interplay and linkage a 3D-fem modelling approach, https://doi.org/10.3929/ethz-a-010057885
 
* Philippe, Thomas, 2013, Single viscous layer fold interplay and linkage a 3D-fem modelling approach, https://doi.org/10.3929/ethz-a-010057885
  
 
* Somody, Joseph C., 2015, Exploring the role of amino-acid alphabets in protein-interface classification, https://doi.org/10.3929/ethz-a-010415857
 
* Somody, Joseph C., 2015, Exploring the role of amino-acid alphabets in protein-interface classification, https://doi.org/10.3929/ethz-a-010415857
 +
 +
* Thum, Helga, 2013, Numerical Simulations of the Weak Approximation Error for Parabolic Stochastic Partial Differential Equations, https://math.ethz.ch/content/dam/ethz/special-interest/math/applied-mathematics/sam-dam/teaching-and-studies/theses/HelgaThumMSC.pdf
  
 
* Zoller, Stefan, 2010, New semi-empirical codon substitution models based on principal component analysis of mammalian sequences, https://doi.org/10.3929/ethz-a-006215736
 
* Zoller, Stefan, 2010, New semi-empirical codon substitution models based on principal component analysis of mammalian sequences, https://doi.org/10.3929/ethz-a-006215736
 +
 +
===HPC team===
 +
====PhD theses
 +
* Jafargholi, Mahmoud, 2018, Direct Numerical Simulation of Turbulent Premixed Syngas Flames in Closed Domains, https://doi.org/10.3929/ethz-b-000274327 (phd thesis)
 +
 +
* Lang, Christine Michaela, 2022, Image-based computational analysis of branching morphogenesis in lung and kidney development, https://doi.org/10.3929/ethz-b-000534992 (phd thesis)
 +
 +
* Schwab, Patrick, 2019, Learning to treat, explain and diagnose with neural networks, https://doi.org/10.3929/ethz-b-000379702 (phd thesis)

Latest revision as of 06:57, 29 June 2022

Introduction

There is no obligation to reference/cite Euler if you use it for work that is published in a scientific journal. If you did some cool science using the Euler cluster and mention this in your publication (for instance in the acknowledgment section), then please also send an email to cluster support with the reference to your publication, so we can add it to this wiki page.

Referencing Euler

If you are using Euler as a guest user, we kindly ask you to acknowledge this in your publications (acknowledgment section). This will help us keep Euler open to all members of ETH, as the cluster's public share is financed by the (limited) budget of Scientific IT Services.

There is no standard sentence how Euler should be cited, but please find below some examples from publications from this list:

  • "The numerical simulations were performed on the Euler cluster operated by the High Performance Computing group at ETH Zürich."
  • "Numerical simulations were performed on the ETH Zürich Euler cluster"
  • "The calculations were run on the Euler cluster of ETH Zürich"
  • "The simulations were performed on the ETH Euler cluster"
  • "All simulations were performed on the ETH-Zürich Euler cluster"
  • "Calculations were carried out on the ETH Euler cluster"

Summary

The summary lists the total number of scientific publications that reference the HPC clusters (Euler, Leonhard, Brutus) or the HPC group since 2008. Publications that are referencing more than one cluster are only counted once.

Articles in scientific journals Theses Total
893 274 1167

Please find below graphs showing the number of journal articles per year for each cluster and the number of theses per year.

Euler: Leonhard Open: Brutus:
HPC team (no cluster specified): Total (journal articles): Total (theses):
Total (articles+theses):

Publications referencing the Euler cluster (2014-now) sorted by year

2022

  • Bacci, M., Dal Molin, M., Fenicia, F., Reichert, P., Šukys, J., Application of Stochastic Time Dependent Parameters to Improve the Characterization of Uncertainty in Conceptual Hydrological Models, J. Hydrol, 612, Part A, 128057, (2022), https://doi.org/10.1016/j.jhydrol.2022.128057
  • Balázs, A., Faccenna, C., Gerya, T., Ueda, K., Funiciello, F., The Dynamics of Forearc – Back-Arc Basin Subsidence Numerical Models and Observations From Mediterranean Subduction Zones, Tectonics, 41, e2021TC007078, (2022), https://doi.org/10.1029/2021TC007078
  • Barros, M., Walker, A., Stanković, T., Computational Design of an Additively Manufactured Origami-Based Hand Orthosis, Proc. Design Soc., 2, (2022), 1231-1242, https://doi.org/10.1017/pds.2022.125
  • Baumann, K.B.L, Thoma, R., Callbeck, C.M., Niederdorfer, R., Schuber, C.J., Müller, B., Lever, M.A., Bürgmann, H., Microbial Nitrogen Transformation Potential in Sediments of Two Contrasting Lakes Is Spatially Structured but Seasonally Stable, mSphere, 7(1), e01013-21, (2022), https://doi.org/10.1128/msphere.01013-21
  • Bhowal, S., O'Neill D., Fechner, M., Spaldin, N.A., Staub, U., Duffy, J., Collins, S.P., Anti-symmetric Compton Scattering in LiNiPO4: Towards a Direct Probe of the Magneto-Electric Multipole Moment, Open Res. Europe, 1, 132, (2022), https://doi.org/10.12688/openreseurope.13863.2
  • Bissig, F., Khan, A., Giardini, D., Evidence for Basalt Enrichment in the Mantle Transition Zone from Inversion of Triplicated P- and S-Waveforms, Earth Planet. Sci. Lett., 580, 117387, (2022), https://doi.org/10.1016/j.epsl.2022.117387
  • Bortis, A., Trassin, M., Fiebig, M., Lottermoser, Th., Manipulation of Charged Domain Walls in Geometric Improper Ferroelectric Thin Films: A Phase-Field Study, Phys. Rev. Mat., 6, 064403, (2022), https://doi.org/10.1103/PhysRevMaterials.6.064403
  • Cujia, K.S., Herb, K., Zopes, J., Abendroth, J.M., Degen, C.L., Parallel Detection and Spatial Mapping of Large Nuclear Spin Clusters, Nat. Commun., 13, 1260, (2022), https://doi.org/10.1038/s41467-022-28935-z
  • Dal Zilio, L., Lapusta, N., Avouac, J.-Ph., Gerya, T., Subduction Earthquake Sequences in a Non-Linear Visco-Elasto-Plastic Megathrust, Geophys. J. Int., 229, (2022), 1098-1121, https://doi.org/10.1093/gji/ggab521
  • Debnath, J., Parrinello, M., Computing Rates and Understanding Unbinding Mechanisms in Host–Guest Systems, J. Chem. Theory Comput., 18(3), (2022), 1314-1319, https://doi.org/10.1021/acs.jctc.1c01075
  • Delli Compagni, R., Cheng, Zh., Russo, S., Van Boeckel, T.P., A Hybrid Neural Network-SEIR Model for Forecasting Intensive Care Occupancy in Switzerland During COVID-19 Epidemics, PLoS ONE, 17(3), e0263789, (2022), https://doi.org/10.1371/journal.pone.0263789
  • Desmet, F., Gruber, N., Köhn, E.E., Münnich, M., Vogt, M., Tracking the Space-Time Evolution of Ocean Acidification Extremes in the California Current System and Northeast Pacific, J. Geophys. Res. Oceans, 127, e2021JC018159, (2022), https://doi.org/10.1029/2021JC018159
  • Dessauges, C., Mikelson, J., Dobrzyński, M., Jacques, M.-A., Frismantiene, A., Gagliardi, P.A., Khammash, M., Pertz, O., Optogenetic Actuator – ERK Biosensor Circuits Identify MAPK Network Nodes That Shape ERK Dynamics, Mol. Syst. Biol., 18, e10670, (2022), https://doi.org/10.15252/msb.202110670
  • Eyring, N., Kittner, N., High-Resolution Electricity Generation Model Demonstrates Suitability of High-Altitude Floating Solar Power, iScience, 25(6), 104394, (2022), https://doi.org/10.1016/j.isci.2022.104394
  • Fei, F., Jenny, P., A High-Order Unified Stochastic Particle Method Based on the Bhatnagar-Gross-Krook Model for Multi-Scale Gas Flows, Comput. Phys. Commun., 274, 108303, (2022), https://doi.org/10.1016/j.cpc.2022.108303
  • Fluri, J., Kacprzak, T., Lucchi, A., Schneider, A., Refregier, A., Hofmann, Th., Full w CDM Analysis of KiDS-1000 Weak Lensing Maps Using Deep Learning, Phys. Rev. D, 105, 083518, (2022), https://doi.org/10.1103/PhysRevD.105.083518
  • Gadeyne, T., Zhang, P., Schild, A., Wörner, H.J., Low-Energy Electron Distributions from the Photoionization of Liquid Water: a Sensitive Test of Electron Mean Free Paths, Chem. Sci., 13, (2022), 1675-1692, https://doi.org/10.1039/D1SC06741A
  • Gerken, L.R.H., Gogos, A., Starsich, F.H.L., David, H., Gerdes, M.E., Schiefer, H., Psoroulas, S., Meer, D., Plasswilmk, L., Weber, D.C., Herrmann, I.K., Catalytic Activity Imperative for Nanoparticle Dose Enhancement in Photon and Proton Therapy, Nat. Commun., 13, 3248, (2022), https://doi.org/10.1038/s41467-022-30982-5
  • Gjorgiev, B., David, A.E., Sansavini, G., Cascade-Risk-Informed Transmission Expansion Planning of AC Electric Power Systems, Electr. Pow. Syst. Res., 204, 107685, (2022), https://doi.org/10.1016/j.epsr.2021.107685
  • Gjorgiev, B., Garrison, J.B., Han, X., Landis, F., van Nieuwkoop, R., Raycheva, E., Schwarz, M., Yan, X., Demiray, T., Hug, G., Sansavini, G., Schaffner, Ch., Nexus-e: A Platform of Interfaced High-Resolution Models for Energy-Economic Assessments of Future Electricity Systems, Appl. Energ., 307, 118193, (2022), https://doi.org/10.1016/j.apenergy.2021.118193
  • Gjorgiev, B., Sansavini, G., Identifying and Assessing Power System Vulnerabilities to Transmission Asset Outages via Cascading Failure Analysis, Reliab. Eng. Syst. Safe., 217, 108085, https://doi.org/10.1016/j.ress.2021.108085
  • Gschwendtner, Ch., Krauss, K., Coupling Transport and Electricity: How Can Vehicle-To-Grid Boost the Attractiveness of Carsharing?, Transport. Res. D, 106, 103261, (2022), https://doi.org/10.1016/j.trd.2022.103261
  • Jain, Sh., Haller, G., How to Compute Invariant Manifolds and Their Reduced Dynamics in High-Dimensional Finite Element Models, Nonlinear Dyn., 107, (2022), 1417-1450, https://doi.org/10.1007/s11071-021-06957-4
  • Kagho, G.O., Meli, J., Walser, D., Balac, M., Effects of Population Sampling on Agent-Based Transport Simulation of On-Demand Services, Procedia Comput. Sci., 201, (2022), 305-312, https://doi.org/10.1016/j.procs.2022.03.041
  • Karagodin, A., Rozanov, E., Mironova, I., On the Possibility of Modeling the IMF By-Weather Coupling through GEC-Related Effects on Cloud Droplet Coalescence Rate, Atmosphere, 13(6), 881, (2022), https://doi.org/10.3390/atmos13060881
  • Kiani Shahvandi, M. Soja, B., Inclusion of Data Uncertainty in Machine Learning and Its Application in Geodetic Data Science, With Case Studies for the Prediction of Earth Orientation Parameters and GNSS Station Coordinate Time Series, Adv. Space Res., 70(3), (2022), 563-575, https://doi.org/10.1016/j.asr.2022.05.042
  • Kim, D., Efe, I., Torlakcik, H., Terzopoulou, A., Veciana, A., Siringil, E., Mushtaq, F., Franco, C., von Arx, D., Sevim, S., Puigmarti-Luis, J., Nelson, B., Spaldin, N.A., Gattinoni, Ch., Chen, X.-Zh., Pané, S., Magnetoelectric Effect in Hydrogen Harvesting: Magnetic Field as a Trigger of Catalytic Reactions, Adv. Mater., 2022, 2110612, (2022), https://doi.org/10.1002/adma.202110612
  • Köhn, E.E., Münnich, M., Vogt, M., Desmet, F., Gruber, N., Strong Habitat Compression by Extreme Shoaling Events of Hypoxic Waters in the Eastern Pacific, J. Geophys. Res. Oceans, 127(6), e2022JC018429, (2022), https://doi.org/10.1029/2022JC018429
  • Krauss, K., Krail, M., Axhausen, K.W., What Drives the Utility of Shared Transport Services for Urban Travellers? A Stated Preference Survey in German Cities, Travel, behaviour & society, 26, (2022), 206-220, https://doi.org/10.1016/j.tbs.2021.09.010
  • Kummer, Th., Rossi, S., Vandenberghe, S., Demertzis, S., Jenny, P., Embedded Computational Heart Model for External Ventricular Assist Device Investigations, Cardiovasc. Eng. Tech., 2022, https://doi.org/10.1007/s13239-022-00610-w
  • Lefebure, N., Khosravi, M., Badyn, M.H., Bünning, F., Lygeros, J., Jones, C., Smith, R.S., Distributed Model Predictive Control of Buildings and Energy Hubs, Energ. Buildings, 259, 111806, (2022), https://doi.org/10.1016/j.enbuild.2021.111806
  • Liu, M., Gerya, T., Rozel, A.B., Self-Organization of Magma Supply Controls Crustal Thickness Variation and Tectonic Pattern Along Melt-Poor Mid-Ocean Ridges, Earth Planet. Sci. Lett., 584, 117482, (2022), https://doi.org/10.1016/j.epsl.2022.117482
  • Lori, M., Armengot, L., Schneider, M., Schneidewind, U., Bodenhausen, N., Mäder, P., Krause, H.-M., Organic Management Enhances Soil Quality and Drives Microbial Community Diversity in Cocoa Production Systems, Sci. Total Environ., 834, 155223, (2022), https://doi.org/10.1016/j.scitotenv.2022.155223
  • Lovecchio, E., Gruber, N., Münnich, M., Frenger, I., On the Processes Sustaining Biological Production in the Offshore Propagating Eddies of the Northern Canary Upwelling System, J. Geophys. Res. Oceans, 127, e2021JC017691, (2022), https://doi.org/10.1029/2021JC017691
  • Mittelviefhaus, M., Georges, G., Boulouchos, K., Electrification of Multi-Energy Hubs Under Limited Electricity Supply: De-/Centralized Investment and Operation for Cost-Effective Greenhouse Gas Mitigation, Adv. Appl. Energ., 5, 100083, (2022), https://doi.org/10.1016/j.adapen.2022.100083
  • Moser, B., Lorenz, C.S., Schmitt, U., Réfrégier, A., Fluri, J., Sgier, R., Tarsitano, F., Heisenberg, L., Symbolic Implementation of Extensions of the PyCosmo Boltzmann Solver, Astron. Comput., 40, 100603, (2022), https://doi.org/10.1016/j.ascom.2022.100603
  • Munch, J., Ueada, K., Schnydrig, St., May, D.A., Gerya, T., Contrasting Influence of Sediments vs Surface Processes on Retreating Subduction Zones Dynamics, Tectonophysics, 836, 229410, https://doi.org/10.1016/j.tecto.2022.229410
  • Narayanan, H., Cruz Bournazou, M.N., Gosálbez, G.G., Butté, A., Functional-Hybrid Modeling through Automated Adaptive Symbolic Regression for Interpretable Mathematical Expressions, Chem. Eng. J., 430, 133032, (2022), https://doi.org/10.1016/j.cej.2021.133032
  • Niederdorfer, R., Fragner, L., Yuan, L., Hausherr, D., Wei, J., Magyar, P., Joss, A., Lehmann, M.F., Ju, F., Bürgmann, H., Distinct Growth Stages Controlled by the Interplay of Deterministic and Stochastic Processes in Functional Anammox Biofilms, Water Res., 200, 117225, (2021), https://doi.org/10.1016/j.watres.2021.117225
  • Petkov, I., Mavromatidis, G., Knoeri, Ch., Allan, J., Hoffmann, V.H., Mangoret: An Optimization Framework for the Long-Term Investment Planning of Building Multi-Energy System and Envelope Retrofits, Appl. Energ., 314, 118901, (2022), https://doi.org/10.1016/j.apenergy.2022.118901
  • Pickering, B., Lombardi, F., Pfenninger, S., Diversity of Options To Eliminate Fossil Fuels and Reach Carbon Neutrality Across the Entire European Energy System, Joule, 6(6), (2022), 1253-1276, https://doi.org/10.1016/j.joule.2022.05.009
  • Ries, B., Normak, K., Weiss, R.G., Rieder, S., Barros, E.P., Champion, C., König, G., Riniker, S., Relative Free-Energy Calculations for Scaffold Hopping-Type Transformations with an Automated RE-EDS Sampling Procedure, J. Comput. Aided Mol. Des., 36, (2022), 117-130, https://doi.org/10.1007/s10822-021-00436-z
    (article does not explicitly mention the Euler cluster but the author B. Ries informed us that the cluster was used for this work)
  • Ries, B., Rieder, S., Rhiner, C., Hünenberger, Ph.H., Riniker, S., RestraintMaker: A Graph-Based Approach to Select Distance Restraints in Free-Energy Calculations with Dual Topology,J. Comput. Aided Mol. Des., (2022), https://doi.org/10.1007/s10822-022-00445-6
    (article does not explicitly mention the Euler cluster but the author B. Ries informed us that the cluster was used for this work)
  • Rosa-Medina, R., Ferri, F., Finger, F., Dogra, N., Kroeger, K., Lin, R., Chitra, R., Donner, T., Esslinger, T., Observing Dynamical Currents in a Non-Hermitian Momentum Lattice, Phys. Rev. Lett., 128, 143602, (2022), https://doi.org/10.1103/PhysRevLett.128.143602
  • Sabia, C., Buffo, A., Casalini, T., Marchisio, D.L., Barbato, M.C., Storti, G., FBR for Polyolefin Production in Gas Phase: Validation of a Two-Phase Compartmentalized Model by Comparison with CFD, Macromol. React. Eng., 2022, 2100058, (2022), https://doi.org/10.1002/mren.202100058
  • Sayed, M.A., Dehbi, A., Niceno, B., Mikityuk, K., Particle Subgrid Scale Modeling in Hybrid RANS/LES of Turbulent Channel Flow at Low to Moderate Reynolds Number, Powder Technol., 397, 117013, (2022), https://doi.org/10.1016/j.powtec.2021.11.057
  • Schemm, S., Papritz, L., Rivière, G., Storm Track Response to Uniform Global Warming Downstream of an Idealized Sea Surface Temperature Front, Weather Clim. Dynam., 3, (2022), 601-623, https://doi.org/10.5194/wcd-3-601-2022
  • Schmid, B., Becker, F., Molloy, J., Axhausen, K., Lüdering, J., Hagen, J., Blome, A., Modeling Train Route Decisions During Track Works, J. Rail Transp. Plan. Manag., 22, 100320, (2022), https://doi.org/10.1016/j.jrtpm.2022.100320
  • Szulágyi, J., Binkert, F., Surville, C., Meridional Circulation of Dust and Gas in the Circumstellar Disk: Delivery of Solids onto the Circumplanetary Region, ApJ, 924, 1, (2022), https://doi.org/10.3847/1538-4357/ac32d1
  • Tagliavini, G., Khan, M.H., McCorquodale, M., Westbrook, Ch., Holzner, M., Wake Characteristics of Complex-Shaped Snow Particles: Comparison of Numerical Simulations With Fixed Snowflakes to Time-Resolved Particle Tracking Velocimetry Experiments With Free-Falling Analogs, Phys. Fluids, 34, 055112, (2022), https://doi.org/10.1063/5.0089759
  • Thürlemann, M., Böselt, L., Riniker, S., Learning Atomic Multipoles: Prediction of the Electrostatic Potential with Equivariant Graph Neural Networks, J. Chem. Theory Comput., 18(3), (2022), 1701-1710, https://doi.org/10.1021/acs.jctc.1c01021
  • Yang, M., Bonati, L., Polino, D., Parrinello, M., Using Metadynamics to Build Neural Network Potentials for Reactive Events: The Case of Urea Decomposition in Water, Catal. Today,387, (2022), 143-149, https://doi.org/10.1016/j.cattod.2021.03.018
  • Yakimov, A.V., Ravi, M., Verel, R., Sushkevich, V.L., van Bokhoven, J.A., Copéret, Ch., Structure and Framework Association of Lewis Acid Sites in MOR Zeolite, J. Am. Chem. Soc., 144, (2022), 10377-10385, https://doi.org/10.1021/jacs.2c02212

2021

  • Andrienko, G., Andrienko, N., Boldrini, Ch., Caldarelli, G., Cintia, P., Cresci, S., FAcchini, A., Giannotti, F., Gionis, A., Guidotti, R., Mathioudakis, M., Muntean, C.I., Pappalardo, L., Pendreschi, D., Purnaras, E., Pratesi, F., Tesconi, M., Trasarti, R., (So) Big Data and the Transformation of the City, Int. J. Data Sc. Anal., 11, (2021), 311-340, https://doi.org/10.1007/s41060-020-00207-3
  • Balázs, A., Faccenna, C., Ueda, K., Funiciello, F., Boutoux, A., Blanc, E. J.-P., Gerya, T., Oblique Subduction and Mantle Flow Control on Upper Plate Deformation: 3D Geodynamic Modeling, Earth Planet. Sci. Lett., 569, 117056, (2021), https://doi.org/10.1016/j.epsl.2021.117056
  • Bhowal, S., O'Neill, D., Fechner, M., Spaldin, N.A., Staub, U., Duffy, J., Collins, S.P., Anti-Symmetric Compton Scattering in LiNiPO4: Towards a Direct Probe of the Magneto-Electric Multipole Moment, Open Res. Europe, 2021, 1:134, (2021), https://doi.org/10.12688/openreseurope.13863.2
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  • Brodowski, C., Sukhodolov, T., Feinberg, A., Höpfner, M., Peter, T., Stenke, A., Rozanov, E., Modeling the Sulfate Aerosol Evolution After Recent Moderate Volcanic Activity, 2008–2012, J. Geophys. Res. Atmos., 126, e2021JD035472, (2021), https://doi.org/10.1029/2021JD035472
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  • Comeau, Ch., Ries, B., Stadelmann, Th., Tremblay, J., Poulet, S., Fröhlich, U., Côté, J., Boudreault, P.-L., Derbali, R.M., Sarret, Ph., Grandbois, M., Leclair, G., Riniker, S., Marsault, E., Modulation of the Passive Permeability of Semipeptidic Macrocycles: N- and C-Methylations Fine-Tune Conformation and Properties, J. Med. Chem., 64, (2021), 5365-5383, https://doi.org/10.1021/acs.jmedchem.0c02036
    (article does not explicitly mention the Euler cluster but the author B. Ries informed us that the cluster was used for this work)
  • Cooper, A., Turney, C.S.M., Palmer, J., Hogg, A., McGlone, M., Wilmshurst, J., Lorry, A.M., Heaton, T.J., Russell, J.M., McCracken, K., Anet, J.G., Rozanov, E., Friedel, M., Suter, I., Peter, Th., Muscheler, R., Adolphi, F., Dosseto, A., Faith, J.T., Fenwick, P., Fogwill, Ch.J., Hughen, K., Lipson, M., Liu, J., Nowaczyk, N., Rainsley, E., Ramsey, Ch.B., Sebastianelli, P., Souilmi, Y., Stevenson, J., Thomas, Z., Tobler, R., Zech, R., A Global Environmental Crisis 42,000 Years Ago, Science, 371, (2021), 811-818, https://doi.org/10.1126/science.abb8677
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  • Gruber, W., Niederdorfer, R., Ringwald, J., Morgenroth, E., Bürgmann, H., Joss, A., Linking Seasonal N2O Emissions and Nitrification Failures to Microbial Dynamics in a SBR Wastewater Treatment Plant, Water Res. X, 11, 100098, (2021), https://doi.org/10.1016/j.wroa.2021.100098
  • Gülcher, A.J.P., Ballmer, M.D., Tackley, P.J., Coupled Dynamics and Evolution of Primordial and Recycled Heterogeneity in Earth's Lower Mantle, Solid Earth, 12, (2021), 2087-2107, https://doi.org/10.5194/se-12-2087-2021
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  • Herrmann, L., Keller, M., Schwab, C., Quasi-Monte Carlo Bayesian Estimation Under Besov Priors in Elliptic Inverse Problems, Math. Comp., 90, (2021), 1831-1860, https://doi.org/10.1090/mcom/3615
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  • Karagodin-Doyennel, A., Rozanov, Sukhodolov, T., Egorova, T., Saiz-Lopez, A., Cuevas, C.A., Fernandez, R.P., Sherwen, T., Volkamer, R., Koenig, T.K., Giroud, T., Peter, Th., Iodine Chemistry in the Chemistry–Climate Model SOCOL-AERv2-I, Geosci. Model Dev., 14, (2021), 6623-6645, https://doi.org/10.5194/gmd-14-6623-2021
  • Karagodin-Doyennel, A., Rozanov, E., Kuchar, A., Ball, W., Arsenovic, P., Remsberg, E., Jöckel, P., Kunze, M., Plummer, D.A., Stenke, A., Marsh, D., Kinnison, D., Peter, Th., The Response of Mesospheric H2O and CO to Solar Irradiance Variability in Models and Observations, Atmos. Chem. Phys., 21, (2021), 201-216, https://doi.org/10.5194/acp-21-201-2021
  • Keskinen, K., Vera-Tudela, W., Wright, Y.M., Boulouchos, K., Experimental Investigation of Wall Heat Transfer Due to Spray Combustion in a High-Pressure/high-Temperature Vessel, Int. J. Engine Res., 22(12), (2021), 3489-3502, https://doi.org/10.1177/14680874211007232
  • Lin, R., Georges, Ch., Klinder, J., Molignini, P., Büttner, M., Lode, A.U.J., Chitra, R., Hemmerich, A., Kessler, H., Mott Transition in a Cavity-Boson System: A Quantitative Comparison Between Theory and Experiment, SciPost Phys., 11, 030, (2021), https://doi.org/10.21468/SciPostPhys.11.2.030
  • Maeder, M., Weiss, O., Boulouchos, K., Assessing the Need for Flexibility Technologies in Decarbonized Power Systems: A New Model Applied to Central Europe, Appl. Energ., 282, 116050, (2021), https://doi.org/10.1016/j.apenergy.2020.116050
  • Markmann, S., Franckié, M., Pal, Sh., Stark, D., Beck, M., Fiebig, M., Scalari, G., Faist, J., Two-Dimensional Spectroscopy on a THz Quantum Cascade Structure, Nanophotonics, 10(1), (2021), 171-180, https://doi.org/10.1515/nanoph-2020-0369
  • Michel, V.F., Esswein, T., Spaldin, N.A., Interplay Between Ferroelectricity and Metallicity in BaTiO3, J. Mater. Chem. C, 9(27), (2021), 8640-8649, https://doi.org/10.1039/D1TC01868J
  • Mittelviefhaus, M., Pareschi, G., Allan, J., Georges, G., Boulouchos, K., Optimal Investment and Scheduling of Residential Multi-Energy Systems Including Electric Mobility: A Cost-Effective Approach to Climate Change Mitigation, Appl. Energ., 301, 117445, (2021), https://doi.org/10.1016/j.apenergy.2021.117445
  • Mizrahi, L., Nandan, Sh., Wiemer, St., Embracing Data Incompleteness for Better Earthquake Forecasting, J. Geophys. Res. Sol. Ea., 126(12), e2021JB0223709, (2021), https://doi.org/10.1029/2021JB022379
  • Molignini, P., Celades, A.G., Chitra, R., Chen, W., Crossdimensional Universality Classes in Static and Periodically Driven Kitaev Models, Phys. Rev. B, 103, 184507, (2021), https://doi.org/10.1103/PhysRevB.103.184507
  • Morad, V., Yakunin, S., Benin, B.M., Shynkarenko, Y., Grotevent, M.J., Shorubalko, I., Boehme, S.C., Maksym V. Kovalenko, M.V., Hybrid 0D Antimony Halides as Air‐Stable Luminophores for High‐Spatial‐Resolution Remote Thermography, Adv. Mater., 33, 2007355, (2021), https://doi.org/10.1002/adma.202007355
  • Müller, A., Comas-Vives, A., Copéret, C., Shape and Surface Morphology of Copper Nanoparticles under CO2 Hydrogenation Conditions from First Principles, J. Phys. Chem. C, 125, (2021), 396-409, https://doi.org/10.1021/acs.jpcc.0c08261
  • Mylonas, Ch., Abdallah, I., Chatzi, E., Conditional Variational Autoencoders for Probabilistic Wind Turbine Blade Fatigue Estimation Using Supervisory, Control, and Data Acquisition Data, Wind Energy, 24(10), (2021), 1122-1139, https://doi.org/10.1002/we.2621
  • Niederdorfer, R., Fragner, L., Yuan, L., Hausherr, D., Wei, J., Magyar, P., Joss, A., Lehmann, M.F., Ju, F., Bürgmann, H., Distinct Growth Stages Controlled by the Interplay of Deterministic and Stochastic Processes in Functional Anammox Biofilms, Water Res., 200, 117225, (2021), https://doi.org/10.1016/j.watres.2021.117225
  • Niederdorfer, R., Hausherr, D., Palomo, A., Wei, J., Magyar, P., Smets, B.F., Joss, A., Bürgmann, H., Temperature Modulates Stress Response in Mainstream Anammox Reactors, Commun. Biol., 4, 23, (2021), https://doi.org/10.1038/s42003-020-01534-8
  • Nissen, C., Gruber, N., Münnich, M., Vogt, M., Southern Ocean Phytoplankton Community Structure as a Gatekeeper for Global Nutrient Biogeochemistry, Global Biogeochem. Cy., 35, e2021GB006991, (2021), https://doi.org/10.1029/2021GB006991
  • Nissen, C., Vogt, M., Factors Controlling the Competition Between Phaeocystis and Diatoms in the Southern Ocean and Implications for Carbon Export Fluxes, Biogeosciences, 18, (2021), 251-283, https://doi.org/10.5194/bg-18-251-2021
  • Nonemana, K., Muhich, Ch., Ausman, K., Henry, M., Jankowski, E., Molecular Simulations for Understanding the Stabilization of Fullerenes in Water, J. Comp. Sci. Educ., 12(1), (2021), 39-48, https://doi.org/10.22369/issn.2153-4136/12/1/6
  • Payard, P.-A., Rochlitz, L., Searles, K., Foppa, L., Leuthold, B., Safonova, O.V., Comas-Vives, A., Copéret, C., Dynamics and Site Isolation: Keys to High Propane Dehydrogenation Performance of Silica-Supported PtGa Nanoparticles, JACS Au, 1(9), (2021), 1445-1458, https://doi.org/10.1021/jacsau.1c00212
  • Pulido, H., Stanczyk, N.M., De Moraes, C.M., Mescher, M.C., A Unique Volatile Signature Distinguishes Malaria Infection from Other Conditions That Cause Similar Symptoms, Sci. Rep., 11, 13928, (2021), https://doi.org/10.1038/s41598-021-92962-x
  • Rombach, D., Birenheide, B., Wagenknecht, H.-A., Photoredox Catalytic Pentafluorosulfanylative Domino Cyclization of α-Substituted Alkenes to Oxaheterocycles by Using SF6, Chem. Eur. J., 27, (2021), 8088-8093, https://doi.org/10.1002/chem.202100767
  • Rozanov, E., Egorova, T., Egli, L., Karagodin-Doyennel, A., Sukhodolov, T., Schill, H., Stübi, R., Gröbner, J., Representativeness of the Arosa/Davos Measurements for the Analysis of the Global Total Column Ozone Behavior, Front. Earth Sci., 9, 675084, (2021), https://doi.org/10.3389/feart.2021.675084
  • Sakellarakis, V.D., Wright Y.M., Vera-Tudela, W., Boulouchos, K., Numerical Investigation of the Autoignition of Underexpanded Methane Jets, Fuel, 291, 120169, (2021), https://doi.org/10.1016/j.fuel.2021.120169
  • Smit, Th., Aage, N., Ferguson, S.J., Helgasson, B., Topology Optimization Using PETSc: A Python Wrapper and Extended Functionality, Struct. Multidiscip. O., 64, (2021), 4343-4353, https://doi.org/10.1007/s00158-021-03018-7
  • Spaldin, N.A., Efe, I., Rossell, M., Gattinoni, C., Layer and Spontaneous Polarizations in Perovskite Oxides and Their Interplay in Multiferroic Bismuth Ferrite, J. Chem. Phys., 154, 154702, (2021), https://doi.org/10.1063/5.0046061
  • Stelmakh, A., Aebli, M., Baumketner, A., Kovalenko, M.V., On the Mechanism of Alkylammonium Ligands Binding to the Surface of CsPbBr3 Nanocrystals, Chem. Mater., 33, (2021), 5962-5973, https://doi.org/10.1021/acs.chemmater.1c01081
  • Sukhodolov, T., Egorova, T., Stenke, A., Ball, W.T., Brodowsky, Ch., Chiodo, G., Feinberg, A., Friedel, M., Karagodin-Doyennel, A., Peter, Th., Sedlacek, J., Vattioni, S., Rozanov, E., Atmosphere–Ocean–Aerosol–Chemistry–Climate Model SOCOLv4.0: Description and Evaluation, Geosci. Model Dev., 14(9), (2021), 5525-5560, https://doi.org/10.5194/gmd-14-5525-2021
  • Tabibi, S., Boulet, J., Dillier, N., Bruce, I.C., Phenomenological Model of Auditory Nerve Population Responses to Cochlear Implant Stimulation, J. Neurosci. Meth., 358, 109212, (2021), https://doi.org/10.1016/j.jneumeth.2021.109212
  • Tagliavini, G., McCorquodale, M., Westbrook, Ch., Corso, P., Krol, Q., Holzner, M., Drag Coefficient Prediction of Complex-Shaped Snow Particles Falling in Air Beyond the Stokes Regime, Int. J. Multiphas. Flow, 140, 103652, (2021), https://doi.org/10.1016/j.ijmultiphaseflow.2021.103652
  • Tagliavini, G., McCorquodale, M., Westbrook, Ch., Holzner, M., Numerical Analysis of the Wake of Complex-Shaped Snow Particles at Moderate Reynolds Number, Phys. Fluids, 33, 105103, (2021), https://doi.org/10.1063/5.0064902
  • Tan, E. Y.-Z., Schwonnek, R., Goh, K.T., Primaatmaja, I.W., Lim, C. C.-W., Computing Secure Key Rates for Quantum Cryptography with Untrusted Devices, npj Quantum Inf., 7, 158, (2021), https://doi.org/10.1038/s41534-021-00494-z
  • Tsimouri, I.Ch., Caseri, W.R., Gusev, A.A., Monte Carlo Evidence on Simple Conventional Means to Characterize the Final Extent of Reaction of Cured End-Linked Polymer Networks through the Miller–Macosko Nonlinear Polymerization Theory, Macromolecules, 54(4), (2021), 1589-1598, https://doi.org/10.1021/acs.macromol.0c02251
  • Turano, M., Walker, M., Grillo, F., Gattinoni, Edmondson, J., Adesida, O., Hunt, G., Kirkman, P.M., Richardson, N.V., Baddeley, C.J., Michaelides, A., Costantini, G., Understanding the Interaction of Organic Corrosion Inhibitors with Copper at the Molecular Scale: Benzotriazole on Cu(110), Appl. Surf. Sci., 570, 151206, (2021), https://doi.org/10.1016/j.apsusc.2021.151206
  • Ulrich, G.F., Zemp, N., Vorburger, C., Boulain, H., Quantitative Trait Locus Analysis of Parasitoid Counteradaptation to Symbiont-Conferred Resistance, Heredity, 127, (2021), 219-232, https://doi.org/10.1038/s41437-021-00444-7
  • Wang, D., Li, X., Marquant, J., Carmeliet, J., Orehounig, K., Advancing the Thermal Network Representation for the Optimal Design of Distributed Multi-Energy Systems, Front. Energy Res., 9, 668124, (2021), https://doi.org/10.3389/fenrg.2021.668124
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  • Weiss, Ph., Bhopalam, S.R., Meyer, D.W., Jenny, P., On Droplets that Cluster and Evaporate in Reactive Turbulence, Phys. Fluids, 33, 033322, (2021), https://doi.org/10.1063/5.0044383
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2020

  • Antognini, A., Ayres, N.J., Belosevic, I., Bondar, V., Eggenberger, A., Hildebrandt, M., Iwai, R., Kaplan, D.M., Khaw, K.S., Kirch, K., Knecht, A., Papa, A., Petitjean, C., Phillips, T.J., Pigesa, F.M., Ritjoho, N., Stoykov, A., Taqqu, D., Wichmann, G., Demonstration of Muon-Beam Transverse Phase-Space Compression, Phys. Rev. Lett., 125, 164802, (2020), https://doi.org/10.1103/PhysRevLett.125.164802
  • Athanasopoulos, N., Manukyan, E., Bohlen, T., Maurer, H., Time–frequency Windowing in Multiparameter Elastic FWI of Shallow Seismic Wavefield, Geophys. J. Int., 222(2), (2020), 1164-1177, https://doi.org/10.1093/gji/ggaa242
  • Bakowies, D., Estimating Systematic Error and Uncertainty in Ab Initio Thermochemistry: II. ATOMIC(hc) Enthalpies of Formation for a Large Set of Hydrocarbons, J. Chem. Theory Comput., 16, (2020), 399-426, https://doi.org/10.1021/acs.jctc.9b00974
  • Bodénan, J.-D., Surville, C., Szulágyi, J., Mayer, L., Schönbächler, M., Can Chondrules Be Produced by the Interaction of Jupiter with the Protosolar Disk?, ApJ, 901(1), 60(13pp), (2020), https://doi.org/10.3847/1538-4357/abaef2
  • D'Acquisto, M., Dal Zilio, L., Molinari, I., Kissling, E., Gerya, T., van Dinther, Y., Tectonics and Seismicity in the Northern Apennines Driven by Slab Retreat and Lithospheric Delamination, Tectonophysics, 789, 228481, (2020), https://doi.org/10.1016/j.tecto.2020.228481
  • Dal Zilio, L., Kissling, E., Gerya, T., van Dinther, Y., Slab Rollback Orogeny Model: A Test of Concept, Geophys. Res. Lett., 47, e2020GL089917, (2020), https://doi.org/10.1029/2020GL089917
  • Dal Zilio, L., Ruh, J., Avouac, J.P., Structural Evolution of Orogenic Wedges: Interplay Between Erosion and Weak Décollements, Tectonics, 39, e2020TC006210, (2020), https://doi.org/10.1029/2020TC006210
  • Dennis, A.B., Ballesteros, G.I., Robin, S., Schrader, L., Bast, J., Berghöfer, J., Beukeboom, L.W., Belghazi, M., Bretaudeau, A., Buellesbach, J., Cash, E., Colinet, D., Dumas, Z., Errbii, M., Falabella, P., Gatti, J.-L., Geuverink, E., Gibson, J.D., Hertaeg, C., Hartmann, S., Jacquin-Joly, E., Lammers, M., Lavandero, B.I., Lindenbaum, I., Massardier-Galata, L., Meslin, C., Montagné, N., Pak, N., Poirié, M., Salvia, R., Smith, Ch.R., Tagu, D., Tares, S., Vogel, H., Schander, T., Simon, J.-Ch., Figueroa, Ch.C., Vorbuerger, Ch., Legeai, F., Gadau, J., Functional Insights from the GC-Poor Genomes of Two Aphid Parasitoids, Aphidius Ervi and Lysiphlebus Fabarum, BMC Genomics, 21, 376, (2020), https://doi.org/10.1186/s12864-020-6764-0
  • Fagioli, M., Tortorelli, L., Herbel, J., Zürcher, D., Refregier, A., Amara, A., Spectro-Imaging Forward Model of Red and Blue Galaxies, J. Cosmol. Astropart. P., 2020, 050, (2020), https://doi.org/10.1088/1475-7516/2020/06/050
  • Gasparini, B., McGraw, Z., Storelvmo, T., Lohmann, U., To What Extent Can Cirrus Cloud Seeding Counteract Global Warming?, Environ. Res. Lett., 15, 054002, (2020), https://doi.org/10.1088/1748-9326/ab71a3
  • Gülcher, A.J.P., Gebhardt, D.J., Ballmer, M.D., Tackley, P.J., Variable Dynamic Styles of Primordial Heterogeneity Preservation in the Earth’s Lower Mantle, Earth Planet. Sci. Lett., 536, 116160, (2020), https://doi.org/10.1016/j.epsl.2020.116160
  • Gülcher, A.J.P., Gerya, T., Montési, L.G.J., Corona Structures Driven by Plume–lithosphere Interactions and Evidence for Ongoing Plume Activity on Venus, Munch, J., Nat. Geosci., 13 (2020), 547-554, https://doi.org/10.1038/s41561-020-0606-1
  • Hadjidoukas, P.E., Bartezzaghi, A., Scheidegger, F., Istrate, R., Bekas, C., Malossi, A.C.I., Torcpy: Supporting Task Parallelism in Python, SoftwareX, 12, 100512, (2020), https://doi.org/10.1016/j.softx.2020.100517
  • Hahn, K.R., Baiker, A., Comparative Density Functional Theory Study of Cinchonidine and Hydrogen Coadsorption on Platinum Group Metals (Rh, Ir, Pd, and Pt) and Its Implications on Surface Chiral Site Formation, J. Phys. Chem. C, 124, 33, (2020), 18020-18030, https://doi.org/10.1021/acs.jpcc.0c03255
  • Hell, M.C., Schneider, T., Li, C., Atmospheric Circulation Response to Short-Term Arctic Warming in an Idealized Model, J. Atmos. Sci., 77(2), (2020), 531-549, https://doi.org/10.1175/JAS-D-19-0133.1
  • Hirshberg, B., Invernizzi, M., Parrinello, M., Path Integral Molecular Dynamics for Fermions: Alleviating the Sign Problem with the Bogoliubov Inequality, J. Chem. Phys., 152, 171102, (2020), https://doi.org/10.1063/5.0008720
  • Hou, I.C.-Y., Sun, Q., Eimre, K., Di Giovannantonio, M., Urgel, J.I., Ruffieux, P., Narita, A., Fasel, R., Müllen, K., On-Surface Synthesis of Unsaturated Carbon Nanostructures with Regularly Fused Pentagon−Heptagon Pairs, J. Am. Chem. Soc., 142, (2020), 10291-10296, https://dx.doi.org/10.1021/jacs.0c03635
  • Jordan, I., Huppert, M., Rattenbacher, D., Peper, M., Jelovina, D., Perry, C., von Conta, A., Schild, A., Wörner, H.J., Attosecond Spectroscopy of Liquid Water, Science, 369, (2020), 974-979, https://doi.org/10.1126/science.abb0979
  • Kacprzak, T., Herbel, J., Nicola, A., Sgier, R., Tarsitano, F., Bruderer, C., Amara, A., Refregier, A., Bridle, S.L., Drlica-Wagner, A., Grün, D., Hartley, W.G., Hoyle. B, Secco, L.F., Zuntz, J., Annis, J., Avila, S., Bertin, E., Brooks, D., Buckley-Geer, E., Carnero Rosell, A., Carrasco Kind, M., Carretero, J., da Costa, L.N., De Vicente, J., Desai, S., Diehl, H.T., Doel, P., García-Bellido, J., Gaztanaga, E., Gründl, R.A., Gschwend, J., Gutierrez, G., Hollowood, D.J., Honscheid, K., James, D.J., Jarvis, M., Lima, M., Maia, M.A.G., Marshall, J.L., Melchior, P., Menanteau, F., Miquel, R., Paz-Chinchón, F., Plazas, A.A., Sanchez, E., Scarpine, V., Serrano, S., Sevilla-noarbe, I., Smith, M., Suchyta, E., Swanson, M.E.C., Tarle, G., Vikram, V., Weller, J., Monte Carlo Control Loops for Cosmic Shear Cosmology with DES Year 1 Data, Phys. Rev. D, 101, 082003, (2020), https://doi.org/10.1103/PhysRevD.101.082003
  • Käppeli, R., Balsara, D.S., Chandrashekar, P., Hazra, A., Optimal, Globally Constraint-Preserving, DG(TD)2 Schemes for Computational Electrodynamics Based on Two-Derivative Runge-Kutta Timestepping and Multidimensional Generalized Riemann Problem Solvers – A von Neumann Stability Analysis, J. Comput. Phys., 408, 109238, (2020), https://doi.org/10.1016/j.jcp.2020.109238
  • Knezevic, M., Heilmann, M., Piccini, G.M., Tiefenbacher, K., Overriding Intrinsic Reactivity in Aliphatic C−H Oxidation: Preferential C3/C4 Oxidation of Aliphatic Ammonium Substrates, Angew. Chem. Int. Ed., 59, (2020), 12387-12391, https://doi.org/10.1002/anie.202004242
  • Kumar, S., Tutcuoglu, A.D., Hollenweger, Y., Kochmann, D.M., A Meshless Multiscale Approach to Modeling Severe Plastic Deformation of Metals: Application to ECAE of Pure Copper, Comp. Mater. Sci., 173, 109329, (2020), https://doi.org/10.1016/j.commatsci.2019.109329
  • Kundel, D., Bodenhausen, N., Jørgensen, H.B., Truu, J., Birkhofer, K., Hedlund, K., Mäder, P., Fliessbach, A., Effects of Simulated Drought on Biological Soil Quality, Microbial Diversity and Yields Under Long-Term Conventional and Organic Agriculture, FEMS Microbiol. Ecol., 96(12), fiaa205, (2020), https://doi.org/10.1093/femsec/fiaa205
  • Li, X., Prasser, H.-M. Niceno, B., URANS Simulations of the Single-Phase Mixing in a 4*4 LWR Fuel Bundle with Mixing Vanes, Validated Against a Sub-Channel Experiment, Nucl. Eng. Des., 363, 110612, (2020), https://doi.org/10.1016/j.nucengdes.2020.110612
  • Liang, S., Hemberger, P., Steglich, M., Simonetti, P., Levalois-Grützmacher, J., Grützmacher, Gaan, S., The Underlying Chemistry to the Formation of PO2 Radicals from Organophosphorus Compounds: A Missing Puzzle Piece in Flame Chemistry, Chem. Eur. J., 26, (2020), 10795-10800, https://doi.org/10.1002/chem.202001388
  • Lin, R., Molignini, P., Lode, A.U.J., Chitra, R., Pathway to Chaos through Hierarchical Superfluidity in Blue-Detuned Cavity-BEC Systems, Phys. Rev. A, 101, 061602(R), (2020), https://doi.org/10.1103/PhysRevA.101.061602
  • Lin, R., Molignini, P., Papariello, L., Tsatsos, MC., Lévêque, C., Weiner, S.E., Fasshauer, E., Chitra, R., Lode, A.U.J., MCTDH-X: The Multiconfigurational Time-Dependent Hartree Method for Indistinguishable Particles Software, Quantum Sci. Technol., 5, 024004, (2020), https://doi.org/10.1088/2058-9565/ab788b
  • Lombardi, F., Pickering, B., Colombo, E., Pfenniger, S., Policy Decision Support for Renewables Deployment through Spatially Explicit Practically Optimal Alternatives, Joule, 4(10), (2020), 2185-2207, https://doi.org/10.1016/j.joule.2020.08.002
  • Manser, P., Becker, H., Hörl, S., Axhausen, K.W., Designing a Large-Scale Public Transport Network Using Agent-Based Microsimulation, Transport. Res. A - Pol., 137, (2020), 1-15, https://doi.org/10.1016/j.tra.2020.04.011
  • Mascello, N., Spaldin, N.A., Narayan, A., Meier, Q.N., Theoretical Investigation of Twin Boundaries in WO3: Structure, Properties, and Implications for Superconductivity, Phys. Rev. Research, 2, 033460, (2020), https://doi.org/10.1103/PhysRevResearch.2.033460
  • Mastrotheodoros, T., Pappas, C., Molnar, P., Burlando, P., Manoli, G., Parajka, J., Rigon, R., Szeles, B., Bottazzi, M., Hadjidoukas, P., Fatichi, S., More Green and Less Blue Water in the Alps During Warmer Summers, Nat. Cli. Chang., 10 (2020), 155-161, https://doi.org/10.1038/s41558-019-0676-5
  • Meier, Q.N., Stucky, A., Teyssier, J., Griffin, S.M., van der Marel, D., Spaldin, N.A., Manifestation of Structural Higgs and Goldstone Modes in the Hexagonal Manganites, Phys. Rev. B, 102, 014102, (2020), https://doi.org/10.1103/PhysRevB.102.014102
  • Menant, A., Angiboust, S., Gerya, T., Lacassin, R., Simoes, M., Grandin, R., Transient Stripping of Subducting Slabs Controls Periodic Forearc Uplift, Nat. Commun., 11, 1823, (2020), https://doi.org/10.1038/s41467-020-15580-7
  • Merget, S., Catti, L., Piccini, G.M., Tiefenbacher, K., Requirements for Terpene Cyclizations inside the Supramolecular Resorcinarene Capsule: Bound Water and Its Protonation Determine the Catalytic Activity, J. Am. Chem. Soc., 142, (2020), 4400-4410, https://doi.org/10.1021/jacs.9b13239
  • Munch, F.D., Khan, A., Tauzin, B., van Driel, M., Giardini, D., Seismological Evidence for Thermo-Chemical Heterogeneity in Earth’s Continental Mantle, Earth Planet. Sci. Lett., 539, 116240, (2020), https://doi.org/10.1016/j.epsl.2020.116240
  • Münch, S., Lohmann, U., Developing a Cloud Scheme With Prognostic Cloud Fraction and Two Moment Microphysics for ECHAM‐HAM, J. Adv. Model. Earth. Sy., 12, e2019MS001824, (2020), https://doi.org/10.1029/2019MS001824
  • Oberle, D., Pruett, C.D., Jenny, P., Temporal large-eddy simulation based on direct deconvolution, Phys. Fluids, 32, 065112, (2020), https://doi.org/10.1063/5.0006637
  • Piluski, M., Shiroka, T., Casola, F., Reyes, A.P., Kuhns, Ph.L., Wang, Sh., Ott, H.-R., Mesot, J., Two Coupled Chains Are Simpler Than One: Field-Induced Chirality in a Frustrated Spin Ladder, Sci. Rep., 10, 15862, (2020), https://doi.org/10.1038/s41598-020-72215-z
  • Preuss, S., Ampuero, J.P., Gerya, T., van Dinther, Y., Characteristics of Earthquake Ruptures and Dynamic Off-Fault Deformation on Propagating Faults, Solid Earth, 11, (2020), 1333-1360, https://doi.org/10.5194/se-11-1333-2020
  • Rellstab, Ch., Zoller, S., Sailer, Ch., Tedder, A., Gugerli, F., Shimizu, K.K., Holderegger, R., Widmer, A., Fischer, M.C., Genomic Signatures of Convergent Adaptation to Alpine Environments in Three Brassicaceae Species, Mol. Ecol., 29(22), (2020), 4350-4365, https://doi.org/10.1111/mec.15648
  • Rüdisser, S., Goldberg, N., Ebert, M.-O., Kovacs, H., Gossert, A.D., Efficient Affinity Ranking of Fluorinated Ligands by 19F NMR: CSAR and FastCSAR, J. Biomol. NMR, 74, (2020), 579-594, https://doi.org/10.1007/s10858-020-00325-x
  • Sakellarakis, V.D., Vera-Tudela, W., Doll, U., Ebi, D., Wright, Y.M., Boulouchos, K., The Effect of High-Pressure Injection Variations on the Mixing State of Underexpanded Methane Jets, Int. J. Engine Res., 22(9), (2020), 2900-2918, https://doi.org/10.1177/1468087420960895
  • Sanan, P., May, D.A., Bollhöfer, M., Schenk, O., Pragmatic Solvers for 3D Stokes and Elasticity Problems with Heterogeneous Coefficients: Evaluating Modern Incomplete LDLT Preconditioners, Solid Earth, 11, (2020), https://doi.org/10.5194/se-11-2031-2020
  • Schultheiss, J., Schaab, J., Småbråten, D.R., Skjærvø, S.H., Bourret, E., Yan, Z., Selbach, S.M., Meier, D., Intrinsic and Extrinsic Conduction Contributions at Nominally Neutral Domain Walls in Hexagonal Manganites, Appl. Phys. Lett., 116, 262903, (2020), https://doi.org/10.1063/5.0009185
  • Stegmann, J., Capelo, P.R., Bortola, E., Mayer, L., Improved Constraints from Ultra-Faint Dwarf Galaxies on Primordial Black Holes as Dark Matter, MNRAS, 492, (2020), 5247-5260, https://doi.org/10.1093/mnras/staa170
  • Tröndle, T., Lilliestam, J., Marelli, S., Pfenninger, S., Trade-offs between geographic scale, cost, and infrastructure requirements for fully renewable electricity in Europe, Joule, 4(9), (2020), 1929–1948, https://doi.org/10.1016/j.joule.2020.07.018
    (article does not explicitly mention the Euler cluster but the author T. Tröndle informed us that the cluster was intensively used for this work)
  • Tröndle, T., Supply-side options to reduce land requirements of fully renewable electricity in Europe, PLoS ONE, 15(8), e0236958, (2020), https://doi.org/10.1371/journal.pone.0236958
    (article does not explicitly mention the Euler cluster but the author T. Tröndle informed us that the cluster was intensively used for this work)
  • Tsimouri, I.Ch., Schwarz, F., Caseri, W., Hine, P.J., Gusev, A.A., Comparative Experimental and Molecular Simulation Study of the Entropic Viscoelasticity of End-Linked Polymer Networks, Macromolecules, 53(13), (2020), 5371-5380, https://doi.org/10.1021/acs.macromol.0c00972
  • Valcamonico, D., Sansavini, G., Zio, E., Cooperative Co-Evolutionary Approach to Optimize Recovery for Improving Resilience in Multi-Communities, Reliab. Eng. Syst. Safe., 197, 106800, (2020), https://doi.org/10.1016/j.ress.2020.106800
  • Yan, J., Ballmer, M.D., Tackley, P.J., The Evolution and Distribution of Recycled Oceanic Crust in the Earth's Mantle: Insight from Geodynamic Models, Earth Planet. Sci. Lett., 537, 116171, (2020), https://doi.org/10.1016/j.epsl.2020.116171
  • Zhang, X., Schneider, T., Kaul, C.M., Sensitivity of Idealized Mixed-Phase Stratocumulus to Climate Perturbations, Q. J. Roy. Meteor. Soc., 146, (2020), 3285-3305, https://doi.org/10.1002/qj.3846

2019

  • Ams, M.R., Trapp, N., Schwab, A., Milić, Diederich, F., Chalcogen Bonding“2S–2N Squares”versus CompetingInteractions:Exploring the Recognition Properties of Sulfur, Chem. Eur. J., 25, (2019), 323-333, https://doi.org/10.1002/chem.201804261
  • Antenucci, A., Crespo del Granado, P., Gjorgiev, B., Sansavini, G., Can Models for Long-Term Decarbonization Policies Guarantee Security of Power Supply? A Perspective from Gas and Power Sector Coupling, Energ. Strateg. Rev., 26, 100410, (2019), https://doi.org/10.1016/j.esr.2019.100410
  • Bakowies, D., Estimating Systematic Error and Uncertainty in Ab Initio Thermochemistry. I. Atomization Energies of Hydrocarbons in the ATOMIC(hc) Protocol, J. Chem. Theory Comput., 15, (2019), 5230-5251, https://doi.org/10.1021/acs.jctc.9b00343
  • Balsara, D.S., Käppeli, R., Von Neumann Stability Analysis of Globally Constraint-Preserving DGTD and PNPM Schemes for the Maxwell Equations Using Multidimensional Riemann Solvers, J. Comput. Phys., 376, (2019), 1108-1137, https://doi.org/10.1016/j.jcp.2018.09.051
  • Baykusuheva, D., Zindel, D., Svoboda, V., Bommeli, E., Ochsner, M., Tehlar, A., Wörner, H.J., Real-Time Probing of Chirality During a Chemical Reaction, PNAS, 116(48), (2019), 23923-23929, https://doi.org/10.1073/pnas.1907189116
  • Beaussier, S.J., Gerya, T.V., Burg, J.-P., Near-Ridge Initiation of Intraoceanic Subduction: Effects of Inheritance in 3D Numerical Models of the Wilson Cycle, Tectonophysics, 763, (2019), 1-13, https://doi.org/10.1016/j.tecto.2019.04.011
  • Bjelobrk, Z., Piaggi, P.M., Weber, T., Karmakar, T., Mazzoti, M., Parrinello, M., Naphthalene Crystal Shape Prediction from Molecular Dynamics Simulations, CrystEngComm, 21, (2019), 3280-3288, https://doi.org/10.1039/C9CE00380K
  • Bodenhausen, N., Somerville, V., Desirò, A., Walser, J.-C., Borghi, L., van der Heijden, M.G.A., Schlaeppi, K., Petunia- and Arabidopsis-Specific Root Microbiota Responses to Phosphate Supplementation, Phytobiomes Journal, 3(2), (2019), 112-124, https://doi.org/10.1094/PBIOMES-12-18-0057-R
  • Bongiorno, G., Bodenhausen, N., Bünemann, E.K., Brussaard, L., Greisen, S., Mäder, P., Quist, C.W., Walser, J.-C., de Goede, R.G.M., Reduced Tillage, But Not Organic Matter Input, Increased Nematode Diversity and Food Web Stability in European Long-Term Field Experiments, Mol. Ecol., 28(22), (2019), 4987-5005, https://doi.org/10.1111/mec.15270
  • Bont, L.G., Maurer, S., Breschan, J.R., Automated Cable Road Layout and Harvesting Planning for Multiple Objectives in Steep Terrain, Forests, 10(8), 687, (2019), https://doi.org/10.3390/f10080687
  • Di Palma, P.R., Guyennon, N., Parmigiani, A., Huber, Ch., Hesse, F., Romano, E., Impact of Synthetic Porous Medium Geometric Properties on Solute Transport Using Direct 3D Pore-Scale Simulations, Geofluids, 2019, 6810467, (2019), https://doi.org/10.1155/2019/6810467
  • Dieleman, J., Muschick, M., Nyingi, W.D., Verschuren, D., Species Integrity and Origin of Oreochromis Hunteri (Pisces: Cichlidae), Endemic to Crater Lake Chala (Kenya–Tanzania), Hydrobiologia, 832, (2019), 269-282, https://doi.org/10.1007/s10750-018-3570-7
  • Drechsler, S., Balog, S., Kilbinger, A.F.M., Casalini, T., The Influence of Substituents on Gelation and Stacking Order of Oligoaramid – Based Supramolecular Networks, Soft Matter., 15, (2019), 7250-7261, https://doi.org/10.1039/C9SM00148D
  • Dürrenberger, P., Gupta, A., Khammash, M., A Finite State Projection Method for Steady-State Sensitivity Analysis of Stochastic Reaction Networks, J. Chem. Phys., 150, 134101, (2019), https://doi.org/10.1063/1.5085271
  • Grosheintz-Laval, L., Käppeli, R., High-Order Well-Balanced Finite Volume Schemes for the Euler Equations with Gravitation, J. Comput. Phys., 378, (2019), 324-343, https://doi.org/10.1016/j.jcp.2018.11.018
  • Grübel, J., Wise, S., Thrash, T., Hölscher, C., A Cognitive Model for Routing in Agent-Based Modelling, AIP Conf. Proc., 2116, 250005, (2019), https://doi.org/10.1063/1.5114245
  • Gülcher, A.J.P., Beaussier, S.J., Gerya, T.V., On the Formation of Oceanic Detachment Faults and Their Influence on Intra-Oceanic Subduction Initiation: 3D Thermomechanical Modeling, Earth Planet. Sci. Lett., 506, (2019), 195-208, https://doi.org/10.1016/j.epsl.2018.10.042
  • Gusev, A.A., Numerical Estimates of the Topological Effects in the Elasticity of Gaussian Polymer Networks and Their Exact Theoretical Description, Macromolecules, 52, (2019), 3244-3251, https://doi.org/10.1021/acs.macromol.9b00262
  • Halabi, E.A., Pinotsi, D., Rivera-Fuentes, P., Photoregulated Fluxional Fluorophores for Live-Cell Super-Resolution Microscopy with No Apparent Photobleaching, Nat. Commun., 10, 1232, (2019), https://doi.org/10.1038/s41467-019-09217-7
  • Hampel, A., Liu, P., Franchini, C., Ederer, C., Energetics of the Coupled Electronic–structural Transition in the Rare-Earth Nickelates, NPJ Quantum Materials, 4(1), (2019), http://dx.doi.org/10.1038/s41535-019-0145-4
  • Herrmann, M., Kraft, T., Tormann, T., Scarabello, L., Wiemer, S., A Consistent High-Resolution Catalog of Induced Seismicity in Basel Based on Matched Filter Detection and Tailored Post-Processing, J. Geophys. Res. Sol. Ea., 124, (2019), 8449-8477, https://doi.org/10.1029/2019JB017468
  • Herrmann, L., Schwab, C., Multilevel Quasi-Monte Carlo Integration with Product Weights for Elliptic PDEs with Lognormal Coefficients, ESAIM: M2AN, 53(5), (2019), 1507-1552, https://doi.org/10.1051/m2an/2019016
  • Invernizzi, M., Parrinello, M., Making the Best of a Bad Situation: A Multiscale Approach to Free Energy Calculation, J. Chem. Theory Comput., 15, (2019), 2187-2194, https://doi.org/10.1021/acs.jctc.9b00032
  • Kranjčević, M., Adelmann, A., Arbenz, P., Citterio, A., Stingelin, L., Multi-Objective Shape Optimization of Radio Frequency Cavities Using an Evolutionary Algorithm, Nuclear Inst. and Methods in Physics Research, A920, (2019), 106-114, https://doi.org/10.1016/j.nima.2018.12.066
  • Kranjčević, M., Zadeh, S.G., Adelmann, A., Arbenz, P., van Rienen, U., Constrained Multiobjective Shape Optimization of Superconducting Rf Cavities Considering Robustness Against Geometric Perturbations, Phys. Rev. Accel. Beams, 22, 122001, (2019), https://doi.org/10.1103/PhysRevAccelBeams.22.122001
  • Kumar, P.V., Rossi, T.P., Dafcik, D.M., Reichmuth, D., Kuisma, M., Erhart, P., Puska, M.J., Norris, D.J., Plasmon-Induced Direct Hot-Carrier Transfer at Metal-Acceptor Interfaces, ACS Nano, 13(3), (2019), 3188-3195, https://doi.org/10.1021/acsnano.8b08703
  • Kumar, P.V., Rossi, T.P., Kuisma, M., Erhart, P., Norris, D.J., Direct Hot-Carrier Transfer in Plasmonic Catalysis, Faraday Discuss., 2014, (2019), 189-197, https://doi.org/10.1039/C8FD00154E
  • Kuznetsov, D.A., Chen, Z., Kumar, P.V., Tsoukalou, A., Kierzkowska, A., Abdala, P.M., Safonova, O.V., Federov, A., Müller, C.R., Single Site Cobalt Substitution in 2D Molybdenum Carbide (MXene) Enhances Catalytic Activity in the Hydrogen Evolution Reaction, J. Am. Chem. Soc., 141(44), (2019), 17809-17816, https://doi.org/10.1021/jacs.9b08897
  • Lichtenberg, T., Golabek, G.J., Burn, R. Meyer, M.R., Alibert, Y., Gerya, T.V., Morasini, C., A Water Budget Dichotomy of Rocky Protoplanets from 26Al-Heating, Nat. Astron., 3, (2019), 307-313, https://doi.org/10.1038/s41550-018-0688-5
  • Lichtenberg, T., Keller, T., Katz, R.F., Golabek, G.J., Gerya, T.V., Magma Ascent in Planetesimals: Control by Grain Size, Earth Planet. Sci. Lett., 507, (2019), 154-165, https://doi.org/10.1016/j.epsl.2018.11.034
  • Lin, R., Papariello, L., Molignini, P., Chitra, R., Lode, A.U.J., Superfluid–Mott-Insulator Transition of Ultracold Superradiant Bosons in a Cavity, Phys. Rev. A, 100, 013611, (2019), https://doi.org/10.1103/PhysRevA.100.013611
  • Malär, A.A., Smith-Penzel, S., Camenisch, G.-M., Wiegand, T., Samoson, A., Böckmann, A., Ernst, M., Meier, B.H., Quantifying Proton NMR Coherent Linewidth in Proteins Under Fast MAS Conditions: a Second Moment Approach, Phys. Chem. Chem. Phys., 21, (2019), 18850-18865, https://doi.org/10.1039/C9CP03414E
  • Marques, D.A., Lucek, K., Sousa, V.C., Excoffier, L., Seehausen, O., Admixture Between Old Lineages Facilitated Contemporary Ecological Speciation in Lake Constance Stickleback, Nat. Commun., 10, 4240, (2019), https://doi.org/10.1038/s41467-019-12182-w
  • Meyer de Freitas, L., Becker, H., Zimmermann, M., Axhausen, K.W., Modelling Intermodal Travel in Switzerland: A Recursive Logit Approach, Transport. Res. A - Pol, 119, (2019), 200-213, https://doi.org/10.1016/j.tra.2018.11.009
  • Miho, E., Roškar, R., Greiff, V., Reddy, S.T., Large-Scale Network Analysis Reveals the Sequence Space Architecture of Antibody Repertoires, Nat. Commun., 10, 1321, (2019), https://doi.org/10.1038/s41467-019-09278-8
  • Milanese, A., Mende, D.R., Paoli, L., Salazar, G., Ruscheweyh, H.-J., Cuenca, M., Hingamp, P., Alves, R., Costea, P.I, Coelho, L.P., Schmidt, T.S.B., Almeida, A., Mitchell, A.L., Finn, R.D., Huearta-Cepas, J., Bork, P., Zeller, G., Sunagawa, S., Microbial abundance, activity and population of genomic profiling with mOTUs2, Nat. Commun., 10, 1014, (2019), https://doi.org/10.1038/s41467-019-08844-4
  • Mitov, V., Stadler, T., Parallel Likelihood Calculation for Phylogenetic Comparative Models: The SPLITT C++ Library, Methods Ecol. Evol., 10(4), (2019), 493-506, https://doi.org/10.1111/2041-210X.13136
  • Mueller, J., Matlack, K.H., Shea, K., Daraio, Ch., Energy Absorption Properties of Periodic and Stochastic 3D Lattice Materials, Adv. Theory Simul., 2019, 1900081, (2019), https://doi.org/10.1002/adts.201900081
  • Paidikondala, M., Rangasami, V.K., Nawale, G.N., Casalini, T., Perale, G., Kadekar, S., Mohanty, G., Salminen, T., Oommen, O.P., Varghese, O.P, An Unexpected Role of Hyaluronic Acid in Trafficking siRNA Across the Cellular Barrier: The First Biomimetic, Anionic, Non‐Viral Transfection Method, Angew. Chem. Int. Ed., 58, (2019), 2815-2819, https://doi.org/10.1002/anie.201900099
  • Parmigiani, A., Di Palma, P.R., Leclaire, S., Habib, F., Kong, X.-Z., Characterization of Transport-Enhanced Phase Separation in Porous Media Using a Lattice-Boltzmann Method, Geofluids, 2019, 5176410, (2019), https://doi.org/10.1155/2019/5176410
  • Perraudin, N., Srivastava, A., Lucchi, A., Kacprzak, T., Hofmann, Th., Réfrégier, A., Cosmological N-Body Simulations: A Challenge for Scalable Generative Models, Comput. Astrophys. Cosmol., 6, 5, (2019), https://doi.org/10.1186/s40668-019-0032-1
  • Polino, D., Parrinello, M., Kinetics of Aqueous Media Reactions via Ab Initio Enhanced Molecular Dynamics: The Case of Urea Decomposition, J. Phys. Chem. B, 123, (2019), 6851-6856, https://doi.org/10.1021/acs.jpcb.9b05271
  • Preuss, S., Herrendörfer, R. Gerya, T., Ampuero, J.-P., van Dinther, Y., Seismic and Aseismic Fault Growth Lead to Different Fault Orientations, J. Geophys. Res. Sol. Ea., 124, (2019), 8867-8889, https://doi.org/10.1029/2019JB017324
  • Ramirez, M.O., Lummen, T.A., Carrasco, I., Barnes, E., Aschauer, U., Stefanska, D., Gupta, A.S., de las Heras, C., Akamatsu, H., Holt, M., Molina, P., Barnes, A., Haislmaier, R.C., Deren, P.J., Prieto, C., Bausá, L.E., Spaldin, N.A., Gopalan, V., Emergent Room Temperature Polar Phase in CaTiO3 Nanoparticles and Single Crystals, APL Mater., 7, 011103, (2019), https://doi.org/10.1063/1.5078706
  • Rizzi, V., Mendels, D., Sicilia, E., Parrinello, M., Blind Search for Complex Chemical Pathways Using Harmonic Linear Discriminant Analysis, J. Chem. Theory Comput., 15(8), (2019), 4507-4515, https://doi.org/10.1021/acs.jctc.9b00358
  • Rizzi, V., Polino, D., Sicilia, E., Russo, N., Parrinello, M., The Onset of Dehydrogenation in Solid Ammonia Borane: An Ab Initio Metadynamics Study, Angew. Chem. Int. Ed., 58, (2019), 3976-3980, https://doi.org/10.1002/anie.201900134
  • Saito, F., Trapp, N., Bode, J.W., Iterative Assembly of Polycyclic Saturated Heterocycles from Monomeric Building Blocks, J. Am. Chem. Soc., 141, (2019), 5544-5554, https://doi.org/10.1021/jacs.9b01537
  • Schneider, T., Kaul, C.M., Pressel, K.G., Possible Climate Transitions from Breakup of Stratocumulus Decks Under Greenhouse Warming, Nat. Geosci., 12, (2019), 163-167, https://doi.org/10.1038/s41561-019-0310-1
  • Sesterhenn, F., Galloux, M., Vollers, S.S., Csepregi, L., Yang, C., Descamps, D., Bonet, J., Friedensohn, S., Gainza, P., Corthésy, P., Chen, M., Rosset, S., Rameix-Welti, M.-A., Éléouët, J.-F., Reddy, S.T., Graham, B.S., Riffault, S., Correia, B.E., Boosting Subdominant Neutralizing Antibody Responses With a Computationally Designed Epitope-Focused Immunogen, PLoS Biol., 17(2), e3000164, (2019), https://doi.org/10.1371/journal.pbio.3000164
  • Sferrazza, C., Wahlsten, A., Trueeb, C., D'Andrea, R., Ground Truth Force Distribution for Learning-Based Tactile Sensing: A Finite Element Approach, IEEE Access, 7, (2019), 173438-173449, https://doi.org/10.1109/ACCESS.2019.2956882
  • Skjærvø, S.H, Meier, Q.N., Feygenson, M., Spaldin, N.A., Billinge, S.J.L., Bozin, E.S., Selbach, S.M., Unconventional Continuous Structural Disorder at the Order-Disorder Phase Transition in the Hexagonal Manganites, Phys. Rev. X, 9, 031001, (2019), https://doi.org/10.1103/PhysRevX.9.031001
  • Tröndle, T., Pfenninger, S., Lilliestam, J., Home-Made or Imported: On the Possibility for Renewable Electricity Autarky on All Scales in Europe, Energy Strateg. Rev., 26, 100388, (2019), https://doi.org/10.1016/j.esr.2019.100388
    (article does not explicitly mention the Euler cluster but the author T. Tröndle informed us that the cluster was intensively used for this work)
  • van Zelst, I., Wollherr, S., Gabriel, A.-A., Madden, E.H., van Dinther, Y., Modeling Megathrust Earthquakes Across Scales: One-way Coupling From Geodynamics and Seismic Cycles to Dynamic Rupture, J. Geophys. Res. Sol. Ea., 124, (2019), 11414-11446, https://doi.org/10.1029/2019JB017539
  • Varma, N., Mutt, E., Mühle, J., Lesca, E., Crystal Structure of Jumping Spider Rhodopsin-1 as a Light Sensitive GPCR, PNAS, 116(29), (2019), 14547-14556, https://doi.org/10.1073/pnas.1902192116
  • Weiss, Ph., Oberle, D., Meyer, D.W., Jenny, P., Impact of Turbulence Forcing Schemes on Particle Clustering, Phys. Fluids 31, 061703, (2019), https://doi.org/10.1063/1.5110241
  • Yu, Zh., Shea, K., Stanković, T., A Computational Method for the Design of an Additively Manufactured Personalized Artificial Spinal Disc With Physiological Stiffness Under Multiple Loading Conditions, J. Mech. Des., 141(10), 101406, (2019), https://doi.org/10.1115/1.4043931
  • Zhang, Y.-Y., Niu, H., Piccini, G.M., Mendels, D., Parrinello, M., Improving Collective Variables: The Case of Crystallization, J. Chem. Phys., 150, 094509, (2019), https://doi.org/10.1063/1.5081040
  • Zoller, S., Koepf, E., Roos, P., Steinfeld, A., Heat Transfer Model of a 50 kW Solar Receiver–Reactor for Thermochemical Redox Cycling Using Cerium Dioxide, J. Sol. Energy Eng., 141(2), 021014, (2019), https://doi.org/10.1115/1.4042059

2018

  • Altenhoff, A.M., Glover, N.M., Train, C.-M., Kaleb, K., Vesztrocy, A.W., Dylus, D., de Farias, T.M., Zile, K., Stevenson, Ch., Long, J., Redestig, H., Gonnet, G.H., Dessimoz, Ch., The OMA Orthology Database in 2018: Retrieving Evolutionary Relationships Among All Domains of Life Through Richer Web and Programmatic Interfaces, Nucleic Acids Res., 46(D1), (2018), D477-D485, https://doi.org/10.1093/nar/gkx1019
  • Bachmann, B.J., Giampietro, C., Bayram, A., Stefopoulos, G., Michos, Ch., Graeber, G., Falk, M.V., Poulikakos, D., Ferrari, A., Honeycomb-Structured Metasurfaces for the Adaptive Nesting of Endothelial Cells Under Hemodynamic Loads, Biomater. Sci., 6, (2018), 2726-2737, https://doi.org/10.1039/C8BM00660A
  • Balázs, A., Matenco, L., Vogt, K., Cloetingh, S., Gerya, T., Extensional Polarity Change in Continental Rifts: Inferences From 3-D Numerical Modeling and Observations, J. Geophys. Res. Sol. Ea., 123, (2018), 8073-8094, https://doi.org/10.1029/2018JB015643
  • Bissig, F., Khan, A., van Driel, M., Stähler, S.C., Giardini, D., Panning, M., Drilleau, M., Lognonné, P., Gudkova, T.V., Zharkov, V.N., Plesa, A.-C., Banerdt, W.B., On the Detectability and Use of Normal Modes for Determining Interior Structure of Mars, Space Sci. Rev., 214, 114, (2018), https://doi.org/10.1007/s11214-018-0547-9
  • Blume, S.O.P, Sansavini, G., The Influence of Load Characteristics on Early Warning Signs in Power Systems, In: D'Agostino G., Scala A. (eds) Critical Information Infrastructures Security. CRITIS 2017. Lecture Notes in Computer Science, vol 10707. Springer, Cham., (2018), https://doi.org/10.1007/978-3-319-99843-5_7
  • Böhm, J., Georgoudis, A., Larsen, K.J., Schönemann, H., Zhang, Y., Complete Integration-by-Parts Reductions of the Non-Planar Hexagon-Box via Module Intersections, J. High Energ. Phys., 2018, 24, (2018), https://doi.org/10.1007/JHEP09(2018)024
  • Bourgeois, Y., Stritt, C., Walser, J.-C., Gordon, S.P., Vogel, J.P., Roulin, A.C., Genome‐wide Scans of Selection Highlight the Impact of Biotic and Abiotic Constraints in Natural Populations of the Model Grass Brachypodium Distachyon, Plant J., 96(2), (2018), 438-451, https://doi.org/10.1111/tpj.14042
  • Colón, D.P., Bindeman, I.N., Gerya, T.V., Thermomechanical Modeling of the Formation of a Multilevel, Crustal-Scale Magmatic System by the Yellowstone Plume, Geophys. Res. Lett., 45, (2018), 3873-3879, https://doi.org/10.1029/2018GL077090
  • Dal Zilio, L., van Dinther, Y., Gerya, T.V., Pranger, C.C., Seismic Behaviour of Mountain Belts Controlled by Plate Convergence Rate, Earth Planet. Sci. Lett., 482, (2018), 81-92, https://doi.org/10.1016/j.epsl.2017.10.053
  • de Souza, G.F., Khatiwala, S.P., Hain, M.P., Little, S.H., Vance, D., On the Origin of the Marine Zinc–Silicon Correlation, Earth Planet. Sci. Lett., 492, (2018), 22-34, https://doi.org/10.1016/j.epsl.2018.03.050
  • Dunnett, K., Narayan, A., Spaldin, N.A., Balatsky, A.V., Strain and Ferroelectric Soft-Mode Induced Superconductivity in Strontium Titanate, Phys. Rev. B, 97, 1440506, (2018), https://doi.org/10.1103/PhysRevB.97.144506
  • Feulner, P.G.D., Schwarzer, J., Häsler, M.P., Meier, J.I., Seehausen, O., A Dense Linkage Map of Lake Victoria Cichlids Improved the Pundamilia Genome Assembly and Revealed a Major QTL for Sex-Determination, G3 Genes Genom. Genet., 8(7), (2018), 2411-2420, https://doi.org/10.1534/g3.118.200207
  • Frässle, S., Lomakina, E.I., Kasper, L., Manjaly, Z.M., Leff, A., Pruessmann, K.P., Buhmann, J.M., Stephan, K.E., A Generative Model of Whole-Brain Effective Connectivity, NeuroImage, 179, (2018), 505-529, https://doi.org/10.1016/j.neuroimage.2018.05.058
  • García-López, V., Milić, J.V., Zalibera, M., Neshchadin, D., Kuss-Petermann, M., Ruhlmann, L., Nomrowski, J., Trapp, N., Boudone, C., Gescheidt, G., Wenger, O.S., Diederich, F., Light-Actuated Resorcin[4]Arene Cavitands, Tetrahedron, 74(39), (2018), 5615-5626, https://doi.org/10.1016/j.tet.2018.08.002
  • Gasparini, B., Meyer, A., Neubauer, D., Münch, S., Lohmann, U., Cirrus Cloud Properties as Seen by the CALIPSO Satellite and ECHAM-HAM Global Climate Model, J. Climate, 31(5), (2018), 1983-2003, https://doi.org/10.1175/JCLI-D-16-0608.1
  • Hirsch, A.L., Prestele, R., Davin, E.L., Seneviratne, S.I., Thiery, W., Verburg, P.H., Modelled Biophysical Impacts of Conservation Agriculture on Local Climates, Glob. Change Biol., 24, (2018), 4758-4774, https://doi.org/10.1111/gcb.14362
  • Huang, W.T.K, Ickes, L., Tegen, I., Rinaldi, M., Ceburnis, D., Lohmann, U., Global Relevance of Marine Organic Aerosol as Ice Nucleating Particles, Atmos. Chem. Phys., 18, (2018), 11423-11445, https://doi.org/10.5194/acp-18-11423-2018
  • Hunt, A.C., Cook, D.L., Lichtenberg, T., Reger, P.M., Ek, M., Golabek, G.J., Schönbächler, M., Late Metal–silicate Separation on the IAB Parent Asteroid: Constraints from Combined W and Pt Isotopes and Thermal Modelling, Earth Planet. Sci. Lett., 482, (2018), 490-500, https://doi.org/10.1016/j.epsl.2017.11.034
  • Jain, Sh., Tiso, P., Simulation-Free Hyper-Reduction for Geometrically Nonlinear Structural Dynamics: A Quadratic Manifold Lifting Approach, J. Comput. Nonlin. Dyn., 13(7), 071003, (2018), https://doi.org/10.1115/1.4040021
  • Kahn, A., Liebske, C., Rozel, A., Rivoldini, A., Nimmo, F., Connolly, J.A.D., Plesa, A.-C., Giardini, D., A Geophysical Perspective on the Bulk Composition of Mars, J. Geophys. Res. Planet., 123, (2018), 575-611, https://doi.org/10.1002/2017JE005371
  • Kranjčević, M., Arbenz, P., Adelmann, A., Multi-Level Preconditioning and Eigenvector Approximation for Axisymmetric Maxwell Eigenproblems, Proc. Appl. Math. Mech., 18, e201800091, (2018), https://doi.org/10.1002/pamm.201800091
  • Lichtenberg, T., Golabek, G.J., Dullemond, C.P., Schönbächler, M., Gerya, T.V., Meyer, M.R., Impact Splash Chondrule Formation During Planetesimal Recycling, Icarus, 302, (2018), 27-43, https://doi.org/10.1016/j.icarus.2017.11.004
  • Lovecchio, E., Gruber, N., Münnich, M., Mesoscale Contribution to the Long-Range Offshore Transport of Organic Carbon from the Canary Upwelling System to the Open North Atlantic, Biogeosciences, 15, (2018), 5061-5091, https://doi.org/10.5194/bg-15-5061-2018
  • Matlack, K.H., Serra-Garcia, M., Palermo, A., Huber, S.D., Daraio, Ch., Designing Perturbative Metamaterials from Discrete Models, Nat. Mat., 17, (2018), 323-328, https://doi.org/10.1038/s41563-017-0003-3
  • Meier, J.I., Marques, D.A., Wagner, C.E., Excoffier, L., Seehausen, O., Genomics of Parallel Ecological Speciation in Lake Victoria Cichlids, Mol. Biol. Evol., 35(6), (2018), 1489-1506, https://doi.org/10.1093/molbev/msy051
  • Milella, F., Gazzani, M., Sutter, D., Mazzotti, M., Process Synthesis, Modeling and Optimization of Continuous Cooling Crystallization with Heat Integration—Application to the Chilled Ammonia CO2 Capture Process, Ind. Eng. Chem. Res., 57(34), (2018), 11712-11727, https://doi.org/10.1021/acs.iecr.8b01993
  • Nissen, C., Vogt, M., Münnich, M., Gruber, N., Haumann, F.A., Factors Controlling Coccolithophore Biogeography in the Southern Ocean, Biogeosciences, 15, (2018), 6997-7024, https://doi.org/10.5194/bg-15-6997-2018
  • Oldenburg, F.J., Bon, M., Schmidt, T.J., Perego, D., Polino, D., Laino, T., Gubler, L.,Schmidt, T.J., Revealing the Role of Phosphoric Acid in All-Vanadium Redox Flow Batteries with DFT Calculations and in Situ Analysis, Phys. Chem. Chem. Phys., 20, (2018), 23664-23673, https://doi.org/10.1039/C8CP04517H
  • Pang, Y., Zhang, H., Gerya, T.V., Liao, J., Cheng, H., Shi, Y., The Mechanism and Dynamics of N-S Rifting in Southern Tibet: Insight From 3-D Thermomechanical Modeling, J. Geophys. Res. Sol. Ea., 123, (2018), 859-877, https://doi.org/10.1002/2017JB014011
  • Porer, M., Fechner, M., Bothschafter, E.M., Rettig, L., Savoini, M., Esposito, V., Rittmann, J., Kubli, M., Neugebauer, M.J., Abreu, E., Kubacka, T., Huber, T., Lantz, G., Parchenko, S., Grübel, S., Paarmann, A., Noack, J., Beaud, P., Ingold, G., Aschauer, U., Johnson, S.L., Staub, U., Ultrafast Relaxation Dynamics of the Antiferrodistortive Phase in Ca Doped SrTiO3, Phys. Rev. Lett., 121, 055701, (2018), https://doi.org/10.1103/PhysRevLett.121.055701
  • Ramrath, D.J., Niemann, M., Leibundgut, M., Bieri, Ph., Prange, C., Horn, E.K., Leitner, A., Boehringer, D., Schneider, A., Ban, N., Evolutionary Shift Toward Protein-Based Architecture in Trypanosomal Mitochondrial Ribosomes, Science, 362, eaau7735, (2018), https://doi.org/10.1126/science.aau7735
  • Remondi, F., Kirchner, J.W., Burlando, P., Fatichi, S., Water Flux Tracking With a Distributed Hydrological Model to Quantify Controls on the Spatio temporal Variability of Transit Time Distributions, Water Resour. Res., 54, (2018), 3081-3099, https://doi.org/10.1002/2017WR021689
  • Roche, V., Sternai, P., Guillou-Frottier, L., Menant, A., Jolivet, L., Bouchot, V., Gerya, T., Emplacement of Metamorphic Core Complexes and Associated Geothermal Systems Controlled by Slab Dynamics, Earth Planet. Sci. Lett., 498, (2018), 322-333, https://doi.org/10.1016/j.epsl.2018.06.043
  • Rodríguez, A.C., Kacprzak, T., Lucchi, A., Amara, A., Sgier, R., Fluri, J., Hofmann, Th., Réfrégier, A., Fast Cosmic Web Simulations With Generative Adversarial Networks, Comput. Astrophys. Cosmol., 5, 4, (2018), https://doi.org/10.1186/s40668-018-0026-4
  • Schilling, Ch., Altunbulak, M., Knecht, S., Lopes, A., Whitfield, J.D., Christandl, M., Gross, D., Reiher, M., Generalized Pauli constraints in small atoms, Phys. Rev. A, 97, 052503, (2018), https://doi.org/10.1103/PhysRevA.97.052503
  • Signorell, R.D., Papachristodoulou, A., Xiao, J., Arpagaus, B., Casalini, T., Grandjean, J., Thamm, J., Steiniger, F., Luciani, P., Brambilla, D., Werner, B., Martin, E., Weller, M., Roth, P., Leroux, J.-C., Preparation of PEGylated Liposomes Incorporating Lipophilic Lomeguatrib Derivatives for the Sensitization of Chemo-Resistant Gliomas, Int. J. Pharm., 536, (2018), 388-396, https://doi.org/10.1016/j.ijpharm.2017.11.070
  • Soetbeer, J., Gast, P., Walish, J.J., Zhao, Y., George, Ch., Yang, Ch., Swager, T.M., Griffin, R.G., Nathies, G., Conformation of Bis-Nitroxide Polarizing Agents by Multi-Frequency EPR Spectroscopy, Phys. Chem. Chem. Phys., 20, 25506, (2018), https://doi.org/10.1039/C8CP05236K
  • Taddio, M.F., Mu, L., Keller, C., Schibli, R., Krämer, S.D., Physiologically Based Pharmacokinetic Modelling with Dynamic PET Data to Study the In Vivo Effects of Transporter Inhibition on Hepatobiliary Clearance in Mice, Contrast Media Mol. I., 2018, 5849047, (2018), https://doi.org/10.1155/2018/5849047
  • Tan, Zh., Kaul, C.M., Pressel, K., Cohen, Y., Schneider, T., Teixeira, J., An Extended Eddy‐Diffusivity Mass‐Flux Scheme for Unified Representation of Subgrid‐Scale Turbulence and Convection, J. Adv. Model. Earth Sy., 10, (2018), 770-800, https://doi.org/10.1002/2017MS001162
  • Weiss, Ph., Meyer, D.W., Jenny, P., Evaporating Droplets in Turbulence Studied with Statistically Stationary Homogeneous Direct Numerical Simulation, Phys. Fluids, 30, 083304, (2018), https://doi.org/10.1063/1.5047270
  • Wills, R.C.J., Schneider, T., Mechanisms Setting the Strength of Orographic Rossby Waves across a Wide Range of Climates in a Moist Idealized GCM, J. Climate, 31(18), (2018), 7679-7700, https://doi.org/10.1175/JCLI-D-17-0700.1
  • Yan, H.J., Casalini, T., Hulsart-Billström, G., Wang, S., Oommen O.P., Salvalaglio, M., Larsson, S., Hilborn, J., Varghese, O.P., Synthetic Design of Growth Factor Sequestering Extracellular Matrix Mimetic Hydrogel for Promoting in Vivo Bone Formation, Biomaterials, 161, (2018), 190-202, https://doi.org/10.1016/j.biomaterials.2018.01.041

2017

  • Balsara, D.S., Käppeli, R., Von Neumann Stability Analysis of Globally Divergence-Free RKDG Schemes for the Induction Equation Using Multidimensional Riemann Solvers, J. Comput. Phys., 336, (2017), 104-127, https://doi.org/10.1016/j.jcp.2017.01.056
  • Bettler, S., Simutis, G., Perren, G., Blosser, D., Gvasaliya, S., Zheludev, A., High-pressure Raman Study of the Quantum Magnet (C4H12N2)Cu2Cl6, Phys. Rev. B, 96, 174431, (2017), https://doi.org/10.1103/PhysRevB.96.174431
  • Bieri, Ph., Leibundgut, M., Saurer, M., Böhringer, D., Ban, N., The Complete Structure of the Chloroplast 70S Ribosome in Complex with Translation Factor pY, EMBO J., 36, (2017), 475-486, https://doi.org/10.15252/embj.201695959
  • Blume, S.O.P., Sansavini, G., Effects of Stressor Characteristics on Early Warning Signs of Critical Transitions and "critical Coupling" in Complex Dynamical Systems, Chaos, 27, 121101, (2017), https://doi.org/10.1063/1.5008315
  • Chandrasena, R.U., Yang, W., Lei, Q., Delgado-Jaime, M.U., Wijesekara, K.D., Golalikhani, M., Davidson, B.A., Arenholz, E., Kobayashi, K., Kobata, M., de Groot, F.M.F, Aschauer, U., Spaldin, N.A., Xi, X., Gray, A.X., Strain-Engineered Oxygen Vacancies in CaMnO3 Thin Films, Nano Lett., 17, (2017), 794-799, https://doi.org/10.1021/acs.nanolett.6b03986
  • Charrier, D.E., May, D.A., Schnepp, S.M., Symmetric Interior Penalty Discontiuous Galerkin Discretizations and Block Preconditioning for Heterogeneous Stokes Flow, SIAM J. Sci. Comput., 39(6), (2017), B1021-B1042, https://doi.org/10.1137/16M1084912
  • Chowdhury, P., Gerya, T., Chakraborty, S., Emergence of Silicic Continents as the Lower Crust Peels Off on a Hot Plate-Tectonic Earth, Nature Geosci., 10, (2017), 698-703, https://doi.org/10.1038/ngeo3010
  • Dorostkar, O., Guyer, R.A., Johnson, P.A., Marone, Ch., Carmeliet, J., On the Role of Fluids in Stick-Slip Dynamics of Saturated Granular Fault Gouge Using a Coupled Computational Fluid Dynamics-Discrete Element Approach, J. Geophys. Res. Sol. Ea., 122, (2017), 3689–3700, http://dx.doi.org/10.1002/2017JB014099
  • Freitag, L., Knecht, S., Angeli, C., Reiher, M., Multireference Perturbation Theory with Cholesky Decomposition for the Density Matrix Renormalization Group, J. Chem. Theory Comput., 13(2), (2017), 451-459, https://doi.org/10.1021/acs.jctc.6b00778
  • Gamboa-Carballo, J.J., Rana, V.K., Levalois-Grützmacher, J., Gaspard, S., Jáuregui-Haza, U., Structures and Stabilities of Naturally Occurring Cyclodextrins: a Theoretical Study of Symmetrical Conformers, J. Mol. Model., 23(11), 318, (2017), https://doi.org/10.1007/s00894-017-3488-4
  • Gasparini, B., Münch, S., Poncet, L., Feldmann, M., Lohmann, U., Is Increasing Ice Crystal Sedimentation Velocity in Geoengineering Simulations a Good Proxy for Cirrus Cloud Seeding?, Atmos. Chem. Phys., 17, (2017), 4871-4885, https://doi.org/10.5194/acp-17-4871-2017
  • Grohs, Ph., Hiptmair, R., Pintarelli, S., Tensor-Product Discretization for the Spatially Inhomogeneous and Transient Boltzmann Equation in Two Dimensions, SMAI-JCM, 3, (2017), 219-248, https://doi.org/10.5802/smai-jcm.26
  • Gusev, A.A., Optimum Microstructural Design of Coated Sphere Filled Viscoelastic Composites for Structural Noise and Vibration Damping Applications, Int. J. Solids Struct., 128, (2017), 1-10, https://doi.org/10.1016/j.ijsolstr.2017.07.005
  • Hample, A., Ederer, C., Interplay Between Breathing Mode Distortion and Magnetic Order in Rare-Earth Nickelates R NiO3 Within DFT+U, Phys. Rev. B, 96, 165130, (2017), https://doi.org/10.1103/PhysRevB.96.165130
  • Hernández-Valdés, D., Blanco-González, A., García-Fleitas, A., Rodríguez-Riera, Z., Meola, G., Alberto, R., Jáuregui-Haza, U., Insight into the Structure and Stability of Tc and Re DMSA Complexes: A Computational Study, J. Mol. Graph. Model., 71, (2017), 167-175, https://doi.org/10.1016/j.jmgm.2016.11.014
  • Hirsch, A.L., Wilhelm, M., Davin, E.L., Thiery, W., Seneviratne, S.I., Can Climate‐effective Land Management Reduce Regional Warming?, J. Geophys. Res. Atmos., 122, (2017), 2269-2288, https://doi.org/10.1002/2016JD026125
  • Küchlin, S., Jenny, P., Parallel Fokker–Planck-DSMC Algorithm for Rarefied Gas Flow Simulation in Complex Domains at All Knudsen Numbers, J. Comput. Phys., 328, (2017), 258-277, https://doi.org/10.1016/j.jcp.2016.10.018
  • Kumar, P.V., Norris, D.J., Tailoring Energy Transfer from Hot Electrons to Adsorbate Vibrations for Plasmon-Enhanced Catalysis, ACS Catal., 7(12), (2017), 8343-8350, https://doi.org/10.1021/acscatal.7b03174
  • Liang, S., Hemberger, P., Levalois-Grützmacher, J., Grützmacher, H., Gaan, S., Probing Phosphorus Nitride (P/N) and Other Elusive Species Formed upon Pyrolysis of Dimethyl Phosphoramidate, Chem. Eur. J., 23, (2017), 5595-5601, http://dx.doi.org/10.1002/chem.201700402
  • Lovecchio, E., Gruber, N., Münnich, M., Lachkar, Z., On the Long-Range Offshore Transport of Organic Carbon from the Canary Upwelling System to the Open North Atlantic, Biogeosciences, 14, (2017), 3337-3369, https://doi.org/10.5194/bg-14-3337-2017
  • Luciani, P. Estella-Hermoso de Mendoza, A., Casalini, T., Lang, S., Atrott, K., Spalinger, M.R., Pratsinis, A., Sobek, J., Frey-Wagner, I., Schumacher, J., Leroux, J.-Ch., Rogler, G., Gastroresistant Oral Peptide for Fluorescence Imaging of Colonic Inflammation, J. Control. Release, 262, (2017), 118-126, https://doi.org/10.1016/j.jconrel.2017.07.024
  • Maffei, S., Jackson, A., Livermore, Ph.W., Characterization of Columnar Inertial Modes in Rapidly Rotating Spheres and Spheroids, Proc. R. Soc. A, 473, 20170181, (2017), https://doi.org/10.1098/rspa.2017.0181
  • Marques, D.A., Lucek, K., Haesler, M.Ph., Feller, A.F., Meier, J.I., Wagner, C.E., Excoffier, L., Seehausen, O., Genomic Landscape of Early Ecological Speciation Initiated by Selection on Nuptial Colour, Mol. Ecol., 26(1), (2017), 7-24, https://doi.org/10.1111/mec.13774
  • Meier, J.I., Sousa, V.C., Marques, D.A., Selz, O.M., Wagner, C.E., Excoffier, L., Seehause, O., Demographic Modelling with Whole-Genome Data Reveals Parallel Origin of Similar Pundamilia Cichlid Species after Hybridization, Mol. Ecol., 26, (2017), 123-141, https://doi.org/10.1111/mec.13838
  • Muhich, Ch.L., Re-Evaluating CeO2 Expansion Upon Reduction: Noncounterpoised Forces, Not Ionic Radius Effects, Are the Cause, J. Phys. Chem. C, 121(14), (2017), 8052-8059, https://doi.org/10.1021/acs.jpcc.6b12373
  • Ott, F.D., Riedlinger, A., Ochsenbein, D.R., Knüsel, P.N., Erwin, S.C., Mazzotti, M, Norris, D.J., Ripening of Semiconductor Nanoplatelets, Nano. Lett., 17, (2017), 6870-6877, https://doi.org/10.1021/acs.nanolett.7b03191
  • Parmigiani, A., Degruyter, W., Leclaire, S., Huber, C., Bachmann, O., The Mechanics of Shallow Magma Reservoir Outgassing, Geochem. Geophys. Geosyst., 18, (2017), 2887-2905, https://doi.org/10.1002/2017GC006912
  • Pournaras, E., Brandt, B.-E., Thapa, M., Acharya, D., Espejo-Uribe, J., Ballandies, M., Helbing, D., SFINA - Simulation Framework for Intelligent Network Adaptations, Simul. Model. Pract. Th., 72, (2017), 34-50, https://doi.org/10.1016/j.simpat.2016.12.007
  • Prakash, M.K., Lang, B., Heinrich, H., Valli, P.V., Bauerfeind, P., Sonnenberg, A., Beerenwinkel, N., Misselwitz, B., CMOST: An Open-Source Framework for the Microsimulation of Colorectal Cancer Screening Strategies, BMC Med. Inform. Decis., 17, 80, (2017), https://doi.org/10.1186/s12911-017-0458-9
  • Riedinger, A., Ott, F.D., Mule, A., Mazzotti, S., Knüsel, P.N., Kress, S.J.P., Prins, F., Erwin, S.C., Norris, D.J., An Intrinsic Growth Instability in Isotropic Materials Leads to Quasi-Two-Dimensional Nanoplatelets, Nature Mater., 16, (2017), 743-748, https://doi.org/10.1038/nmat4889
  • Tan, Z., Schneider, T., Teixeira, J., Pressel, K.G., Large-Eddy Simulation of Subtropical Cloud-Topped Boundary Layers: 2. Cloud Response to Climate Change, J. Adv. Model. Earth Syst., 9, (2017), 19-38, https://doi.org/10.1002/2016MS000804
  • Thiery, W., Davin, E.L., Lawrence, D.M., Hirsch, A.L., Hauser, M., Seneviratne, S.I., Present‐day Irrigation Mitigates Heat Extremes, J. Geophys. Res. Atmos., 122, (2017), 1403-1422, https://doi.org/10.1002/2016JD025740

2016

  • Aschauer, U., Spaldin, N.A., Interplay Between Strain, Defect Charge State, and Functionality in Complex Oxides, Appl. Phys. Lett., 109, 031901, (2016), https://doi.org/10.1063/1.4958716
  • Greber, B.J., Gerhardy, S., Leitner, A., Leibundgut, M., Salem, M., Boheringer, D., Leulliot, N., Aebersold, R., Panse, V.G., Ban, N., Insertion of the Biogenesis Factor Rei1 Probes the Ribosomal Tunnel During 60S Maturation, Cell, 162, (2016), 91-102, https://doi.org/10.1016/j.cell.2015.11.027
  • Häner, T., Steiger, D.S., Troyer, M., High Performance Emulation of Quantum Circuits, SC16: International Conference for High Performance Computing, Networking, Storage and Analysis, (2016), 866-874, http://dx.doi.org/10.1109/SC.2016.73
  • Khan, T.A., Friedensohn, S., Gorter de Vries, A.R., Straszewski, J., Ruscheweyh, H.-J., Reddy, S.T., Accurate and Predictive Antibody Repertoire Profiling by Molecular Amplification Fingerprinting, Sci. Adv., 2(3), e1501371, (2016), https://doi.org/10.1126/sciadv.1501371
  • Lichtenbert, T., Golabek, G.J., Gerya, T.V., Meyer, M.R., The Effects of Short-Lived Radionuclides and Porosity on the Early Thermo-Mechanical Evolution of Planetesimals, Icarus, 274, (2016), 350-365, https://doi.org/10.1016/j.icarus.2016.03.004
  • Lichtenberg, T., Parker, R.J., Meyer, M.R., Isotopic Enrichment of Forming Planetary Systems from Supernova Pollution, MNRAS, 462, (2016), 3979-3992, https://doi.org/10.1093/mnras/stw1929
  • Mühlfellner, P., Bürki, M., Bosse, M., Derendarz, W., Philippsen, R., Furgale, P., Summary Maps for Lifelong Visual Localization, J. Field. Robot., 33(5), (2016), 561-590, https://doi.org/10.1002/rob.21595
  • Parmigiani, A., Faroughi, S., Huber, C., Bachmann, O., Su, Y., Bubble Accumulation and Its Role in the Evolution of Magma Reservoirs in the Upper Crust, Nature, 532, (2016), 492-495, https://doi.org/10.1038/nature17401
  • Saletti, M., Molnar, P., Hassan, M.A., Burlando, P., A Reduced-Complexity Model for Sediment Transport and Step-Pool Morphology, Earth Surf. Dynam., 4, (2016), 549-566, https://doi.org/10.5194/esurf-4-549-2016
  • Sclauzero, G., Dymkowski, K., Ederer, C., Tuning the Metal-Insulator Transition in d1 and d2 Perovskites by Epitaxial Strain: A First-Principles-Based Study, Phys. Rev. B, 94, 245109, (2016), https://doi.org/10.1103/PhysRevB.94.245109
  • Skjærvø, S.H., Wefring, E.T., Nesdal, S.K., Gaukås, N.H., Interstitial Oxygen as a Source of p-Type Conductivity in Hexagonal Manganites, Nat. Commun., 7, (2016), 13745, https://doi.org/10.1038/ncomms13745
  • Tan, Z.H., Schneider, T., Teixeira, J., Pressel, K.G., Large‐eddy Simulation of Subtropical Cloud‐topped Boundary Layers: 1. A Forcing Framework with Closed Surface Energy Balance, J. Adv. Model. Earth Syst., 8, (2016), 1565-1585, https://doi.org/10.1002/2016MS000655
  • Tirla, A., Rivera-Fuentes, P., Development of a Photoactivatable Phosphine Probe for Induction of Intracellular Reductive Stress with Single‐Cell Precision, Angew. Chem. Int. Ed., 55 (2016), 14709-14712, https://doi.org/10.1002/anie.201608779
  • Turi, G., Lachkar, Z., Gruber, N., Münnich, M., Climatic Modulation of Recent Trends in Ocean Acidification in the California Current System, Environ. Res. Lett., 11, 014007, (2016), https://doi.org/10.1088/1748-9326/11/1/014007
  • Wills, R.C., Schneider, T., How Stationary Eddies Shape Changes in the Hydrological Cycle: Zonally Asymmetric Experiments in an Idealized GCM, J. Climate, 29(9), (2016), 3161-3179, https://doi.org/10.1175/JCLI-D-15-0781.1

2015

  • Frischknecht, M., Münnich, M., Gruber, N., Remote Versus Local Influence of ENSO on the California Current System, J. Geophys. Res. Oceans, 120, (2015), 1353-1374, https://doi.org/10.1002/2014JC010531
  • Katzgraber, H.G., Hamze, F., Zhu, Zh., Ochoa, A.J.,, Munoz-Bauza, H., Seeking Quantum Speedup Through Spin Glasses: The Good, the Bad, and the Ugly, Phys. Rev. X, 5, 031026, (2015), https://doi.org/10.1103/PhysRevX.5.031026
  • Wang, W., Machta, J., Katzgraber, H.G., Comparing Monte Carlo Methods for Finding Ground States of Ising Spin Glasses: Population Annealing, Simulated Annealing, and Parallel Tempering, Phys. Rev. B, 92, 013303, (2015), https://doi.org/10.1103/PhysRevE.92.013303

2014

  • Wang, W., Machta, J., Katzgraber, H.G., Evidence Against a Mean-Field Description of Short-Range Spin Glasses Revealed Through Thermal Boundary Conditions, Phys. Rev. B, 90, 184412, (2014), https://doi.org/10.1103/PhysRevB.90.184412

Publications referencing the Leonhard Open cluster (2017-2021) sorted by year

2022

  • Liu, M., Gerya, T., Rozel, A.B., Self-Organization of Magma Supply Controls Crustal Thickness Variation and Tectonic Pattern Along Melt-Poor Mid-Ocean Ridges, Earth Planet. Sci. Lett., 584, 117482, (2022), https://doi.org/10.1016/j.epsl.2022.117482

2021

  • Balázs, A., Faccenna, C., Kosuke, U., Funiciello, F., Boutoux, A., Blanc, E. J.-P., Gerya, T., Oblique Subduction and Mantle Flow Control on Upper Plate Deformation: 3D Geodynamic Modeling, Earth Planet. Sci. Lett., 569, 117056, (2021), https://doi.org/10.1016/j.epsl.2021.117056
  • Crysnanto, D., Leonhard, A.S., Fang, Z.-H., Pausch, H., Novel Functional Sequences Uncovered Through a Bovine Multiassembly Graph, PNAS, 118(20), (2020), e2101056118, https://doi.org/10.1073/pnas.2101056118
  • Gökmen, D.E., Ringel, Z., Huber, S.D., Koch-Janusz, M., Symmetries and Phase Diagrams with Real-Space Mutual Information Neural Estimation, Phys. Rev. E, 104, 064106, (2021), https://doi.org/10.1103/PhysRevE.104.064106
  • Jiménez-Luna, J., Skalic, M., Weskamp, N., Schneider, G., Coloring Molecules with Explainable Artificial Intelligence for Preclinical Relevance Assessment, J. Chem., Inf. Model., 61, (2021), 1083-1094, https://doi.org/10.1021/acs.jcim.0c01344

2020

  • Alexeev, D., Amoudrouz, L., Litvinov, S., Koumoutsakos, P., Mirheo: High-Performance Mesoscale Simulations for Microfluidics, Comput. Phys. Commun., 254, 107298, (2020), https://doi.org/10.1016/j.cpc.2020.107298
  • Jaskolowski, M., Ramrath, D.J.F., Bieri, P., Niemann, M., Mattei, S., Calderaro, S., Leibundgut, M., Horn, E.K., Böhringer, D., Schneider, A., Ban, N., Structural Insights into the Mechanism of Mitoribosomal Large Subunit Biogenesis, Mol. Cell, 79, (2020), 629-644, https://doi.org/10.1016/j.molcel.2020.06.030
  • Mattei, S., Ban, A., Picenoni, A., Leibundgut, M., Glockshuber, R., Böhringer, D., Structure of Native Glycolipoprotein Filaments in Honeybee Royal Jelly, Nat. Commun., 11, 6267, (2020), https://doi.org/10.1038/s41467-020-20135-x
  • Preuss, S., Ampuero, J.P., Gerya, T., van Dinther, Y., Characteristics of Earthquake Ruptures and Dynamic Off-Fault Deformation on Propagating Faults, Solid Earth, 11, (2020), 1333-1360, https://doi.org/10.5194/se-11-1333-2020
  • Sanan, P., May, D.A., Bollhöfer, M., Schenk, O., Pragmatic Solvers for 3D Stokes and Elasticity Problems with Heterogeneous Coefficients: Evaluating Modern Incomplete LDLT Preconditioners, Solid Earth, 11, (2020), https://doi.org/10.5194/se-11-2031-2020
  • Yan, J., Ballmer, M.D., Tackley, P.J., The Evolution and Distribution of Recycled Oceanic Crust in the Earth's Mantle: Insight from Geodynamic Models, Earth Planet. Sci. Lett., 537, 116171, (2020), https://doi.org/10.1016/j.epsl.2020.116171

2019

  • Milanese, A., Mende, D.R., Paoli, L., Salazar, G., Ruscheweyh, H.-J., Cuenca, M., Hingamp, P., Alves, R., Costea, P.I, Coelho, L.P., Schmidt, T.S.B., Almeida, A., Mitchell, A.L., Finn, R.D., Huearta-Cepas, J., Bork, P., Zeller, G., Sunagawa, S., Microbial abundance, activity and population of genomic profiling with mOTUs2, Nat. Commun., 10, 1014, (2019), https://doi.org/10.1038/s41467-019-08844-4
  • Perraudin, N., Srivastava, A., Lucchi, A., Kacprzak, T., Hofmann, Th., Réfrégier, A., Cosmological N-Body Simulations: A Challenge for Scalable Generative Models, Comput. Astrophys. Cosmol., 6, 5, (2019), https://doi.org/10.1186/s40668-019-0032-1
  • Preuss, S., Herrendörfer, R. Gerya, T., Ampuero, J.-P., van Dinther, Y., Seismic and Aseismic Fault Growth Lead to Different Fault Orientations, J. Geophys. Res. Sol. Ea., 124, (2019), 8867-8889, https://doi.org/10.1029/2019JB017324

2018

  • Rodríguez, A.C., Kacprzak, T., Lucchi, A., Amara, A., Sgier, R., Fluri, J., Hofmann, Th., Réfrégier, A., Fast Cosmic Web Simulations With Generative Adversarial Networks, Comput. Astrophys. Cosmol., 5, 4, (2018), https://doi.org/10.1186/s40668-018-0026-4

Publications referencing the Brutus cluster (2007-2016) sorted by year

2021

2020

  • Bakowies, D., Estimating Systematic Error and Uncertainty in Ab Initio Thermochemistry: II. ATOMIC(hc) Enthalpies of Formation for a Large Set of Hydrocarbons, J. Chem. Theory Comput., 16, (2020), 399-426, https://doi.org/10.1021/acs.jctc.9b00974
  • Kries, H., Bloch, J.S., Bunzel, H.A., Pinkas, D.M., Hilvert, D., Contribution of Oxyanion Stabilization to Kemp Eliminase Efficiency, ACS Catal., 10(8), (2020), 4460-4464, https://doi.org/10.1021/acscatal.0c00575
  • Piluski, M., Shiroka, T., Casola, F., Reyes, A.P., Kuhns, Ph.L., Wang, Sh., Ott, H.-R., Mesot, J., Two Coupled Chains Are Simpler Than One: Field-Induced Chirality in a Frustrated Spin Ladder, Sci. Rep., 10, 15862, (2020), https://doi.org/10.1038/s41598-020-72215-z
  • Rellstab, Ch., Zoller, S., Sailer, Ch., Tedder, A., Gugerli, F., Shimizu, K.K., Holderegger, R., Widmer, A., Fischer, M.C., Genomic Signatures of Convergent Adaptation to Alpine Environments in Three Brassicaceae Species, Mol. Ecol., 29(22), (2020), 4350-4365, https://doi.org/10.1111/mec.15648
  • Rocca, R., Palazzesi, F., Amato, J., Costa, G., Ortuso, F., Pagano, B., Randazzo, A., Novellino, E., Alcaro, S., Moraca, F., Artese, A., Folding Intermediate States of the Parallel Human Telomeric G-Quadruplex DNA Explored Using Well-Tempered Metadynamics, Sci. Rep., 10, 3176, (2020), https://doi.org/10.1038/s41598-020-59774-x

2019

  • Bakowies, D., Estimating Systematic Error and Uncertainty in Ab Initio Thermochemistry. I. Atomization Energies of Hydrocarbons in the ATOMIC(hc) Protocol, J. Chem. Theory Comput., 15, (2019), 5230-5251, https://doi.org/10.1021/acs.jctc.9b00343
  • Beaussier, S.J., Gerya, T.V., Burg, J.-P., Near-Ridge Initiation of Intraoceanic Subduction: Effects of Inheritance in 3D Numerical Models of the Wilson Cycle, Tectonophysics, 763, (2019), 1-13, https://doi.org/10.1016/j.tecto.2019.04.011
  • Gallinski, H., Wyss, A., Seregni, M., Ma, H., Schnabel, V., Sologubenko, A., Spolenak, R., Disordered Zero-Index Metamaterials Based on Metal-Induced Crystallization, NPG Asia Mater., 11, 58, (2019), https://doi.org/10.1038/s41427-019-0157-3
  • Gülcher, A.J.P., Beaussier, S.J., Gerya, T.V., On the Formation of Oceanic Detachment Faults and Their Influence on Intra-Oceanic Subduction Initiation: 3D Thermomechanical Modeling, Earth Planet. Sci. Lett., 506, (2019), 195-208, https://doi.org/10.1016/j.epsl.2018.10.042
  • Núñez Valdez, M., Spaldin, N.A., Origin and Evolution of Ferroelectricity in the Layered Rare-Earth-Titanate, R2Ti2O7, Carpy-Galy phases, Polyhedron, 171, (2019), 181-192, https://doi.org/10.1016/j.poly.2019.07.018
  • Sheng, J., Li, C., Liao, J., Yang, Z., Jian, Sh., Dynamics of Back-Arc Extension Controlled by Subducting Slab Retreat: Insights from 2D Thermo-Mechanical Modelling, Geol. J., 54(6), (2019), 3376-3388, https://doi.org/10.1002/gj.3336
  • Sizova, E., Hauzenberger, C., Fritz, H., Faryad, S.W., Gerya, T., Late Orogenic Heating of (Ultra)High Pressure Rocks: Slab Rollback vs. Slab Breakof, Geosciences, 9(12), 499, (2019), https://doi.org/10.3390/geosciences9120499

2018

  • de Groot, R., Lüthi, J., Lindsay, H., Holtackers, R., Pelkmans, L., Large-Scale Image-Based Profiling of Single-Cellphenotypes in Arrayed CRISPR-Cas9 Gene Perturbation Screens, Mol. Syst. Biol., 14, e8064, (2018), https://doi.org/10.15252/msb.20178064
  • Popovic, D., Koch, B., Kueblbeck, M., Ellenberg, J., Pelkmans, J., Multivariate Control of Transcript to Protein Variability in Single Mammalian Cells, Cell Systems, 7, (2018), 398-411, https://doi.org/10.1016/j.cels.2018.09.001
  • Roche, V., Sternai, P., Guillou-Frottier, L., Menant, A., Jolivet, L., Bouchot, V., Gerya, T., Emplacement of Metamorphic Core Complexes and Associated Geothermal Systems Controlled by Slab Dynamics, Earth Planet. Sci. Lett., 498, (2018), 322-333, https://doi.org/10.1016/j.epsl.2018.06.043
  • Santos-Cottin, D., Klein, P., Werner, Ph., Miyake, T., de' Medici, L., Gauzzi, A., Lobo, R.P.S.M., Casula, M., Linear Behavior of the Optical Conductivity and Incoherent Charge Transport in BaCoS2, Phys. Rev. Materials, 2, 105001, (2018), https://doi.org/10.1103/PhysRevMaterials.2.105001
  • Scaramucci, A., Shinaoka, H., Mostovoy, M.V., Müller, M., Mudry, C., Troyer, M., Spaldin, N.A., Multiferroic Magnetic Spirals Induced by Random Magnetic Exchanges, Phys. Rev. X, 8, 011005, (2018), https://doi.org/10.1103/PhysRevX.8.011005
  • Schilling, Ch., Altunbulak, M., Knecht, S., Lopes, A., Whitfield, J.D., Christandl, M., Gross, D., Reiher, M., Generalized Pauli constraints in small atoms, Phys. Rev. A, 97, 052503, (2018), https://doi.org/10.1103/PhysRevA.97.052503
  • Vogt, K., Willingshofer, E., Matenco, L., Sokoutis, D., Gerya, T., Cloetingh, S., The Role of Lateral Strength Contrasts in Orogenesis: A 2D Numerical Study, Tectonophysics, 746, (2018), 549-561, https://doi.org/10.1016/j.tecto.2017.08.010
  • Wu, S., Angelikopoulos, P., Papadimitriou, C., Koumoutsakos, P., Bayesian Annealed Sequential Importance Sampling: An Unbiased Version of Transitional Markov Chain Monte Carlo, ASME J. Risk Uncertainty Part B, 4(1), 011008, (2018), https://doi.org/10.1115/1.4037450
  • Yan, H.J., Casalini, T., Hulsart-Billström, G., Wang, S., Oommen O.P., Salvalaglio, M., Larsson, S., Hilborn, J., Varghese, O.P., Synthetic Design of Growth Factor Sequestering Extracellular Matrix Mimetic Hydrogel for Promoting in Vivo Bone Formation, Biomaterials, 161, (2018), 190-202, https://doi.org/10.1016/j.biomaterials.2018.01.041

2017

  • Andersen, J.C., Katzgraber, H.G., Schechter, M., Random-Field-Induced Disordering Mechanism in a Disordered Ferromagnet: Between the Imry-Ma and the Standard Disordering Mechanism, Phys. Rev. B, 96, 214414, (2017), https://doi.org/10.1103/PhysRevB.96.214414
  • Balsara, D.S., Käppeli, R., Von Neumann Stability Analysis of Globally Divergence-Free RKDG Schemes for the Induction Equation Using Multidimensional Riemann Solvers, J. Comput. Phys., 336, (2017), 104-127, https://doi.org/10.1016/j.jcp.2017.01.056
  • Bartl, J., Palazzesi, F., Parrinello, M., Hommers, L., Riederer, P., Walitza, S., Grünblatt, E., The Impact of Methylphenidate and Its Enantiomers on Dopamine Synthesis and Metabolism In Vitro, Prog. Neuropsychopharmacol. Biol. Psychiatry, 79(B), (2017), 281-288, https://doi.org/10.1016/j.pnpbp.2017.07.002
  • Charrier, D.E., May, D.A., Schnepp, S.M., Symmetric Interior Penalty Discontiuous Galerkin Discretizations and Block Preconditioning for Heterogeneous Stokes Flow, SIAM J. Sci. Comput., 39(6), (2017), B1021-B1042, https://doi.org/10.1137/16M1084912
  • Chowdhury, P., Gerya, T., Chakraborty, S., Emergence of Silicic Continents as the Lower Crust Peels Off on a Hot Plate-Tectonic Earth, Nature Geosci., 10, (2017), 698-703, https://doi.org/10.1038/ngeo3010
  • Custodis, V.B.F., Hemberger, P., van Bokhoven, J.A., How Inter- and Intramolecular Reactions Dominate the Formation of Products in Lignin Pyrolysis, Chem. Eur. J., 23, (2017), 8658-8668, https://doi.org/10.1002/chem.201700639
  • Doppelbauer, M.J., Schullian, O, Loreau, J., Vaeck, N., van der Avoird, A., Rennick, C.J., Softley, T.P., Heazlewood, B.R., Using a Direct Simulation Monte Carlo Approach to Model Collisions in a Buffer Gas Cell, J. Chem. Phys., 146, 044302, (2017), https://doi.org/10.1063/1.4974253
  • Dorostkar, O., Guyer, R.A., Johnson, P.A., Marone, Ch., Carmeliet, J., On the Role of Fluids in Stick-Slip Dynamics of Saturated Granular Fault Gouge Using a Coupled Computational Fluid Dynamics-Discrete Element Approach, J. Geophys. Res. Sol. Ea., 122, (2017), 3689–3700, http://dx.doi.org/10.1002/2017JB014099
  • Duprat-Oualid, S., Yamato, Ph., On the Meaning of Peak Temperature Profiles in Inverted Metamorphic Sequences, Geophys. J. Int., 210, (2017), 130-147, https://doi.org/10.1093/gji/ggx129
  • Gamboa-Carballo, J.J., Rana, V.K., Levalois-Grützmacher, J., Gaspard, S., Jáuregui-Haza, U., Structures and Stabilities of Naturally Occurring Cyclodextrins: a Theoretical Study of Symmetrical Conformers, J. Mol. Model., 23(11), 318, (2017), https://doi.org/10.1007/s00894-017-3488-4
  • Giberti, F., Salvalaglio, M., Mazzotti, M., Parrinello, M., 1,3,5-tris(4-bromophenyl)-benzene Nucleation: From Dimers to Needle-like Clusters, Cryst. Growth Des., 17(8), (2017), 4137-4143, https://doi.org/10.1021/acs.cgd.7b00410
  • Gusev, A.A., Optimum Microstructural Design of Coated Sphere Filled Viscoelastic Composites for Structural Noise and Vibration Damping Applications, Int. J. Solids Struct., 128, (2017), 1-10, https://doi.org/10.1016/j.ijsolstr.2017.07.005
  • Hernández-Valdés, D., Blanco-González, A., García-Fleitas, A., Rodríguez-Riera, Z., Meola, G., Alberto, R., Jáuregui-Haza, U., Insight into the Structure and Stability of Tc and Re DMSA Complexes: A Computational Study, J. Mol. Graph. Model., 71, (2017), 167-175, https://doi.org/10.1016/j.jmgm.2016.11.014
  • Kamer, Y., Kissling, E., Ouillon, G., Sornette, D., KaKiOS‐16: A Probabilistic, Nonlinear, Absolute Location Catalog of the 1981–2011 Southern California Seismicity, B. Seismol. Soc. Am., 107(5), (2017), 1994-2007, https://doi.org/10.1785/0120160146
  • Kelevitz, K., Houlié, N., Giardini, D., Rothacher, M., Performance of High‐Rate GPS Waveforms at Long Periods: Moment Tensor Inversion of the 2003 Mw 8.3 Tokachi‐Oki Earthquake, B. Seismol. Soc. Am., 107(4), (2017), 1891-1903, https://doi.org/10.1785/0120160338
  • Keller, T., Katz, R.F., Hirschmann, M.M., Volatiles Beneath Mid-Ocean Ridges: Deep Melting, Channelised Transport, Focusing, and Metasomatism, Earth Planet. Sci. Lett., 465, (2017), 55-68, https://doi.org/10.1016/j.epsl.2017.02.006
  • Kulakova, L., Arampatzis, G., Angelikopoulos, P., Hadjidoukas, P., Papadimitriou, C., Koumoutsakos, P., Data Driven Inference for the Repulsive Exponent of the Lennard-Jones Potential in Molecular Dynamics Simulations, Sci. Rep., 7, 16576, (2017), https://doi.org/10.1038/s41598-017-16314-4
  • Kumar, P.V., Norris, D.J., Tailoring Energy Transfer from Hot Electrons to Adsorbate Vibrations for Plasmon-Enhanced Catalysis, ACS Catal., 7(12), (2017), 8343-8350, https://doi.org/10.1021/acscatal.7b03174
  • Luciani, P. Estella-Hermoso de Mendoza, A., Casalini, T., Lang, S., Atrott, K., Spalinger, M.R., Pratsinis, A., Sobek, J., Frey-Wagner, I., Schumacher, J., Leroux, J.-Ch., Rogler, G., Gastroresistant Oral Peptide for Fluorescence Imaging of Colonic Inflammation, J. Control. Release, 262, (2017), 118-126, https://doi.org/10.1016/j.jconrel.2017.07.024
  • Muhich, Ch.L., Re-Evaluating CeO2 Expansion Upon Reduction: Noncounterpoised Forces, Not Ionic Radius Effects, Are the Cause, J. Phys. Chem. C, 121(14), (2017), 8052-8059, https://doi.org/10.1021/acs.jpcc.6b12373
  • Ni, Q.Z., Markhasin, E., Can, T.V., Corzilius, B., Tan, K.O., Barnes, A.B., Daviso, E., Su, Y., Herzfeld, J., Griffin, R.G., Peptide and Protein Dynamics and Low-Temperature/DNP Magic Angle Spinning NMR, J. Phys. Chem. B, 121(19), (2017), 4997-5006, https://doi.org/10.1021/acs.jpcb.7b02066
  • Pelliciari, J., Huang, Y., Ishii, K., Zhang, C., Dai, P., Chen, G.F., Xing, L., Wang, X., Jin, C., Ding, H., Werner, Ph., Schmitt, T., Magnetic Moment Evolution and Spin Freezing in Doped BaFe2As2, Sci. Rep., 7, 8003, (2017), https://doi.org/10.1038/s41598-017-07286-6
  • Pournaras, E., Brandt, B.-E., Thapa, M., Acharya, D., Espejo-Uribe, J., Ballandies, M., Helbing, D., SFINA - Simulation Framework for Intelligent Network Adaptations, Simul. Model. Pract. Th., 72, (2017), 34-50, https://doi.org/10.1016/j.simpat.2016.12.007
  • Prakash, M.K., Lang, B., Heinrich, H., Valli, P.V., Bauerfeind, P., Sonnenberg, A., Beerenwinkel, N., Misselwitz, B., CMOST: An Open-Source Framework for the Microsimulation of Colorectal Cancer Screening Strategies, BMC Med. Inform. Decis., 17, 80, (2017), https://doi.org/10.1186/s12911-017-0458-9
  • Rosenberger, G., Liu, Y., Röst, H.L., Ludwig, Ch., Buil, A., Bensimon, A., Soste, M., Spector, T.D., Dermitzakis, E.T., Collins, B.C., Malmström, L., Aebersold, R., Inference and Quantification of Peptidoforms in Large Sample Cohorts by SWATH-MS, Nat. Biotech., 35, (2017), 781-788, https://doi.org/10.1038/nbt.3908
  • Schopfer, S., Tiefenbeck, V., Fleisch, E., Staake, Th., Providing Primary Frequency Control with Residential scale Photovoltaic-Battery Systems, Comput. Sci. Res. Dev., 32, (2017), 105-115, https://doi.org/10.1007/s00450-016-0318-3
  • Verona, M.D., Verdolino, V., Palazzesi, F.., Corradini, R., Focus on PNA Flexibility and RNA Binding Using Molecular Dynamics and Metadynamics, Sci. Rep., 7, 42799, (2017), https://doi.org/10.1038/srep42799
  • Vogt, K., Matenco, L., Cloetingh, S., Crustal Mechanics Control the Geometry of Mountain Belts. Insights from Numerical Modelling, Earth Planet. Sci. Lett., 460, (2017), 12-21, https://doi.org/10.1016/j.epsl.2016.11.016

2016

  • Andresen, J.C., Pramudya, Y., Katzgraber, H.G., Thomas, C.K., Zimanyi, G.T., Dobrosavljevic, V., Charge Avalanches and Depinning in the Coulomb Glass: The Role of Long-Range Interactions, Phys. Rev. B, 93, 094429, (2016), https://doi.org/10.1103/PhysRevB.93.094429
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  • Aspelmeier, T., Katzgraber, H.G., Larson, D., Moore, M.A., Wittmann, M., Yeo, J., Finite-Size Critical Scaling in Ising Spin Glasses in the Mean-Field Regime, Phys. Rev. E, 93, 032123, (2016), https://doi.org/10.1103/PhysRevE.93.032123
  • Berry, T.M., Defraeye, T., Nicolaï, B.M., Opara, U.L., Multiparameter Analysis of Cooling Efficiency of Ventilated Fruit Cartons using CFD: Impact of Vent Hole Design and Internal Packaging, Food Bioprocess Technol., 9(9), (2016), 1481-1493, https://doi.org/10.1007/s11947-016-1733-y
  • Crameri, F., Tackley, P.J., Subduction Initiation from a Stagnant Lid and Global Overturn: New Insights from Numerical Models with a Free Surface, Prog. in Earth and Plant. Sci., 3, 30, (2016), https://doi.org/10.1186/s40645-016-0103-8
  • Duretz, T., Agard, Ph., Yamato, Ph., Ducassou, C., Burov, E.B., Gerya, T.V., Thermo-Mechanical Modeling of the Obduction Process Based on the Oman Ophiolite Case, Gondwana Res., 32, (2016), 1-10, https://doi.org/10.1016/j.gr.2015.02.002
  • Fischer, R., Gerya, T., Early Earth Plume-Lid Tectonics: A High-Resolution 3D Numerical Modelling Approach, J. Geodyn., 100, (2016), 198-214, https: //doi.org/10.1016/j.jog.2016.03.004
  • Gukelberger, J., Lienert, S., Kozik, E., Pollet, L., Troyer, M., Fulde-Ferrell-Larkin-Ovchinnikov Pairing as Leading Instability on the Square Lattice, Phys. Rev. B, 94, 075157, (2016), https://doi.org/10.1103/PhysRevB.94.075157
  • Gupta, A., Hepp, B., Khammash, M., Noise Induces the Population-Level Entrainment of Incoherent, Uncoupled Intracellular Oscillators, Cell Systems, 3(6), (2016), 521-531, https://doi.org/10.1016/j.cels.2016.10.006
  • Hässig, M., Duretz, T., Rolland, Y., Sosson, M., Obduction of Old Oceanic Lithosphere Due to Reheating and Plate Reorganization: Insights from Numerical Modelling and the NE Anatolia – Lesser Caucasus Case Example, J. Geodyn., 96, (2016), 35-49, https://doi.org/10.1016/j.jog.2016.02.007
  • Kacprzak, T., Kirk, D., Friedrich, O., Amara, A., Refregier, A., Marian, L., Dietrich, J.P., Suchyta, E., Aleksic, J., Bacon, D., Becker, M.R., Bonnett, C., Bridle, S.L., Chang, C., Eifler, T.F., Hartley, W.G., Huff, E.M, Krause, E., MacCrann, N., Melchior, P., Nicola, A., Samuroff, S., Sheldon, E., Troxel, M.A., Weller, J., Zuntz, J., Abbott, T.M.C., Abdalla, F.B., Armstrong, R., Benoit-Levy, A., Bernstein, G.M., Bernstein, R.A., Bertin, E., Brooks, D., Burke, D.L., Carnero Rosell, A., Carrasco Kind, M., Carretero, J., Castander, F.J., Crocce, M., D’Andrea, C.B., da Costa, L.N., Desai, S., Diehl, H.T., Evrard, A.E., Fausti Neto, A., Flaugher, B., Fosalba, P., Frieman, J., Gerdes, D.W., Goldstein, D.A., Gruen, D., Gruendl, R.A., Gutierrez, G., Honscheid, K., Jain, B., James, D.J., Jarvis, M., Kuehn, K., Kuropatkin, N., Lahav, O., Lima, M., March, M., Marshall, J.L., Martini, P., Miller, C.J., Miquel, R., Mohr, J.J., Nichol, R.C., Nord, B., Plazas, A.A., Romer, A.K., Roodman, A., Rykoff, E.S., Sanchez, E., Scarpine, V., Schubnell, M., Sevilla-Noarbe, I., Smith, R.C., Soares-Santos, M., Sobreira, F., Swanson, M.E.C., Tarle, G., Thomas, D., Vikram, V., Walker, A.R., Zhang, Y., and (The DES Collaboration), Cosmology Constraints from Shear Peak Statistics in Dark Energy Survey Science Verification Data, MNRAS, 463, (2016), 3653-3673, https://doi.org/10.1093/mnras/stw2070
  • Khan, A., van Driel, M., Böse, M., Giardini, D., Ceylan, S., Yan, J., Clinton, J., Euchner, F., Lognonné, P., Murdoch, N., Mimoun, D., Panning, M., Knapmeyer, M., Banerdt, W.B., Single-Station and Single-Event Marsquake Location and Inversion for Structure Using Synthetic Martian Waveforms, Phys. Earth Planet. In., 258, (2016), 28-42, https://doi.org/10.1016/j.pepi.2016.05.017
  • Kim, J.A., Casalini, T., Brambilla, D., Leroux, J.-C., Presumed LRP1-Targeting Transport Peptide Delivers β-Secretase Inhibitor to Neurons in Vitro with Limited Efficiency, Sci. Rep., 6, 34297, (2016), https://doi.org/10.1038/srep34297
  • Kruglyakov, M., Geraskin, A., Kuvshinov, A., Novel Accurate and Scalable 3-D MT Forward Solver Based on a Contracting Integral Equation Method, Comp. Geosci., 96, (2016), 208-217, https://doi.org/10.1016/j.cageo.2016.08.017
  • Li, Y., Deschamps, F., Tackley, P.J., Small Post‐perovskite Patches at the Base of Lower Mantle Primordial Reservoirs: Insights from 2‐D Numerical Modeling and Implications for ULVZs, Geophys. Res. Lett., 43, (2016), 3215-3225, https://doi.org/10.1002/2016GL067803
  • Lichtenbert, T., Golabek, G.J., Gerya, T.V., Meyer, M.R., The Effects of Short-Lived Radionuclides and Porosity on the Early Thermo-Mechanical Evolution of Planetesimals, Icarus, 274, (2016), 350-365, https://doi.org/10.1016/j.icarus.2016.03.004
  • Lichtenberg, T., Parker, R.J., Meyer, M.R., Isotopic Enrichment of Forming Planetary Systems from Supernova Pollution, MNRAS, 462, (2016), 3979-3992, https://doi.org/10.1093/mnras/stw1929
  • McCarty, J., Valsson, O., Parrinello, M., Bespoke Bias for Obtaining Free Energy Differences within Variationally Enhanced Sampling, J. Chem. Theory Comput., 12(5), (2016), 2162-2169, https://doi.org/10.1021/acs.jctc.6b00125
  • Milias-Argeitis, A., Oliveira, A.P., Gerosa, L., Falter, L., Sauer, U., Lygeros, J., Elucidation of Genetic Interactions in the Yeast GATA-Factor Network Using Bayesian Model Selection, PLoS Comput. Biol., 12(3), e1004784, https://doi.org/10.1371/journal.pcbi.1004784
  • Núñes Valdez, M., Spanke, H. Th., Spaldin, N.A., Ab Initio Study of the Ferroelectric Strain Dependence and 180° Domain Walls in the Barium Metal Fluorides BaMgF4 and BaZnF4, Phys. Rev. B, 93, 064112, (2016), https://doi.org/10.1103/PhysRevB.93.064112
  • Oreshenko, M., Heng, K., Demory, B.-O., Optical Phase Curves as Diagnostics for Aerosol Composition in Exoplanetary Atmospheres, MNRAS, 457, (2016), 3420-3429, https://doi.org/10.1093/mnras/stw133
  • Orts, J., Wälti, M.A., Marsh, M., Vera, L., Gossert, A.D., Güntert, P., Riek, R., NMR-Based Determination of the 3D Structure of the Ligand–Protein Interaction Site without Protein Resonance Assignment, J. Am. Chem. Soc., 138(13), (2016), 4393-4400, https://doi.org/10.1021/jacs.5b12391
  • Poulikakos, L.V., Gutsche, Ph., McPeak, K.M., Burger, S., Niegemann, J., Hafner, C., Norris, D.J., Optical Chirality Flux as a Useful Far-Field Probe of Chiral Near Fields, ACS Photonics, 3(9), (2016), 1619-1625, https://doi.org/10.1021/acsphotonics.6b00201
  • Ruminy, M., Núñez Valdez, B., Wehringer, B., Bosak, A., Adroja, D.T., Stuhr, U., Iida, K., Kamazawa, K., Pomjakushina, E., Prabakharan, D., Haas, M.K., Bovo, L., Sheptyakov, D., Cervellino, A., Cava, R.J., Kenzelmann, M., Spaldin, N.A., Fennel, T., First-Principles Calculation and Experimental Investigation of Lattice Dynamics in the Rare-Earth Pyrochlores R2Ti2O7 (R=Tb,Dy,Ho), Phys. Rev. B, 93', 214308, (2016), https://doi.org/10.1103/PhysRevB.93.214308
  • Salvalaglio, M., Tiwary, P., Maggioni, G.M., Mazzotti, M., Parrinello, M., Overcoming Time Scale and Finite Size Limitations to Compute Nucleation Rates from Small Scale Well Tempered Metadynamics Simulations, J. Chem. Phys., 145, 211925, https://doi.org/10.1063/1.4966265
  • Schmidiger, D., Povarov, K.Y., Galeski, S., Reynolds, N., Bewley, R., Guidi, T., Ollivier, J., Zheludev, A., Emergent Interacting Spin Islands in a Depleted Strong-Leg Heisenberg Ladder, Phys. Rev. Lett., 116, 257203, (2016), https://doi.org/10.1103/PhysRevLett.116.257203
  • Shao, Sh., Guo, T., Gross, V., Lazare, A., Koh, Ch.Ch., Gillessen, S., Joerger, M., Jochum, W., Aebersold, R., Reproducible Tissue Homogenization and Protein Extraction for Quantitative Proteomics Using MicroPestle-Assisted Pressure-Cycling Technology, J. Proteome Res., 15(6), (2016), 1821-1829, https://doi.org/10.1021/acs.jproteome.5b01136
  • Sheng, J., Liao, J., Gerya, T., Numerical Modeling of Deep Oceanic Slab Dehydration: Implications for the Possible Origin of Far Field Intra-Continental Volcanoes in Northeastern China, J. Asian Earth Sc., 116, (2016), 328-336, https://doi.org/10.1016/j.jseaes.2015.12.022
  • Turi, G., Lachkar, Z., Gruber, N., Münnich, M., Climatic Modulation of Recent Trends in Ocean Acidification in the California Current System, Environ. Res. Lett., 11, 014007, (2016), https://doi.org/10.1088/1748-9326/11/1/014007
  • Valla, M., Wischert, R., Comas-Vives, A., Conley, M.P., Verel, R., Copéret, Ch., Sautet, Ph., Role of Tricoordinate Al Sites in CH3ReO3/Al2O3 Olefin Metathesis Catalysts, J. Am. Chem. Soc., 138(21), (2016), 6774-6785, https://doi.org/10.1021/jacs.6b00447
  • Zintchenko, I., Wang, L., Troyer, M., Ferromagnetism of the Repulsive Atomic Fermi Gas: Three-Body Recombination and Domain Formation, Eur. Phys. J. B, 89, 180, (2016), https://doi.org/10.1140/epjb/e2016-70302-5

2015

  • Altantzis, C., Frouzakis, C.E., Tomboulides, A.G., Boulouchos, K., Direct Numerical Simulation of Circular Expanding Premixed Flames in a Lean Quiescent Hydrogen-Air Mixture: Phenomenology and Detailed Flame Front Analysis, Combust. Flame, 162, (2015), 331-344, https://doi.org/10.1016/j.combustflame.2014.08.005
  • Bellafard, A., Chakravarty, S., Troyer, M., Katzgraber, H.G., The Effect of Quenched Bond Disorder on First-Order Phase Transitions, Ann. Phys., 357, (2015), 66-78, https://doi.org/10.1016/j.aop.2015.03.026
  • Brambilla, A., Schultze, M., Frouzakis, C.E., Mantzaras, J., Bombach, R., Boulouchos, K., An Experimental and Numerical Investigation of Premixed Syngas Combustion Dynamics in Mesoscale Channels with Controlled Wall Temperature Profiles, P. Combus. Inst., 35, (2015), 3429-3437, https://doi.org/10.1016/j.proci.2014.06.131
  • Chang, C., Busha, M.T., Wechsler, R.H., Refregier, A., Amara, A., Rykoff, E., Becker, M.R., Bruderer, C., Gamper, L., Leistedt, B., Peiris, H., Abbott, T., Abdalla, F.B., Balbinot, E., Banerji, M., Bernstein, R.A., Bertin, E., Brooks, D., Carnero, A., Desai, S, da Costa, L.N., Cunha, C.E., Eifler, T., Evrard, A.E., Fausti Neto, A., Gerdes, D., Gruen, D., James, D., Kuehn, K., Maia, M.A.G., Makler, M., Ogando, R., Plazas, A., Sanchez, E., Santiago, B., Schubnell, M., Sevilla-Noarbe, I., Smith, C., Soares-Santos, M., Suchyta, E., Swanson, M.E.C., Tarle, G., Zuntz, J., Modelling the Transfer Function for the Dark Energy Survey, ApJ, 801, (2015), 73
  • Colombo, C., Gatti, S., Ferrari, R., Casalini, T., Cuccato, D., Morosi, L., Zucchetti, M., Moscatelli, D., Self-Assembling Amphiphilic PEGylated Block Copolymers Obtained through RAFT Polymerization for Drug-Delivery Applications, J. Appl. Polym. Sci., 133, 43084, (2015), https://doi.org/10.1002/app.43084
  • Crameri, F., Tackley, P.J., Parameters Controlling Dynamically Self-Consistent Plate Tectonics and Single-Sided Subduction in Global Models of Mantle Convection, J. Geophys. Res. Sol. Ea., 120, (2015), 3680-3706, https://doi.org/10.1002/2014JB011664
  • Duprat-Oualid, S., Yamato, Ph., Schmalholz, S.M., A Dimensional Analysis to Quantify the Thermal Budget Around Lithospheric-Scale Shear Zones, Terra Nova, 27, (2015), 163-168, https://doi.org/10.1111/ter.12144
  • Frouzakis, C.E., Fogla, N., Tomboulides, A.G., Altantzis, C., Matalon, M., Numerical Study of Unstable Hydrogen/air Flames: Shape and Propagation Speed, P. Combus. Inst., 35(1), 1087-1095, https://doi.org/10.1016/j.proci.2014.05.132
  • Furler, Ph., Steinfeld, A., Heat Transfer and Fluid Flow Analysis of a 4 kW Solar Thermochemical Reactor for Ceria Redox Cycling, Chem. Eng. Sci., 137, (2015), 373-383, https://doi.org/10.1016/j.ces.2015.05.056
  • Gerya, T.V., Stern, R.J., Baes, M., Sobolev, S.V., Whattam, S.A., Plate Tectonics on the Earth Triggered by Plume-Induced Subduction Initiation, Nature, 527, (2015), 221-225, https://doi.org/10.1038/nature15752
  • Gukelberger, J., Huang, L., Werner, Ph., On the Dangers of Partial Diagrammatic Summations: Benchmarks for the Two-Dimensional Hubbard Model in the Weak-Coupling Regime, Phys. Rev. B, 91, 235114, (2015), https://doi.org/10.1103/PhysRevB.91.235114
  • Guo, T., Kouvonen, P., Koh, Ch.Ch., Gillet, L.C., Wolski, W.E., Röst, H.L., Rosenberger, G., Collins, B.C., Blum, L.C., Gillessen, S., Joerger, M., Jochum, W., Aebersold, R., Rapid Mass Spectrometric Conversion of Tissue Biopsy Samples into Permanent Quantitative Digital Proteome Maps, Nat. Med., 21, (2015), https://doi.org/10.1038/nm.3807
  • Hagen, O., Hartmann, K., Steel, M., Stadler, T., Age-Dependent Speciation Can Explain the Shape of Empirical Phylogenies, Syst. Biol., 64(3), (2015), 432-440, https://doi.org/10.1093/sysbio/syv001
  • Herrendörfer, R., van Dinther, Y., Gerya, T., Dalguer, L.A., Earthquake Supercycle in Subduction Zones Controlled by the Width of the Seismogenic Zone, Nature Geosci., 8, (2015), 471-471, https://doi.org/10.1038/ngeo2427
  • Husson, L., Yamato, Ph., Bézos, A., Ultraslow, Slow, or Fast Spreading Ridges: Arm Wrestling Between Mantle Convection and Far-Field Tectonics, Earth Planet. Sci. Lett., 429, (2015), 205-215, https://doi.org/10.1016/j.epsl.2015.07.052
  • Katzgraber, H.G., Hamze, F., Zhu, Zh., Ochoa, A.J.,, Munoz-Bauza, H., Seeking Quantum Speedup Through Spin Glasses: The Good, the Bad, and the Ugly, Phys. Rev. X, 5, 031026, (2015), https://doi.org/10.1103/PhysRevX.5.031026
  • Kunszt, P., Blum, L., Hullár, B., Schmid, E., Srebniak, A., Wolski, W., Rinn, B., Elmer, F.-J., Ramakrishnan, Ch., Quandt, A., Malmström, L., iPortal: The Swiss Grid Proteomics Portal: Requirements and New Features Based on Experience and Usability Considerations, Concurr. Comp.-Pract. E., 27, (2015), 433-445, https://doi.org/10.1002/cpe.3294
  • Li, Y., Deschamps, F., Tackley, P.J., Effects of the Post-Perovskite Phase Transition Properties on the Stability and Structure of Primordial Reservoirs in the Lower Mantle of the Earth, Earth Planet. Sci. Lett., 432, (2015), 1-12, https://doi.org/10.1016/j.epsl.2015.09.040
  • Lyngvi, E., Sanhueza, I.A., Schönebeck, F., Dispersion Makes the Difference: Bisligated Transition States Found for the Oxidative Addition of Pd(PtBu3)2 to Ar-OSO2R and Dispersion-Controlled Chemoselectivity in Reactions with Pd[P(iPr)(tBu2)]2, Organometallics, 34(5), (2015), 805-812, https://doi.org/10.1021/om501199t
  • Malmström, L., Bakochi, A., Svensson, G., Kilsgård, O., Lantz, H., Petersson, A.C., Hauri, S., Karlsson, Ch., Malmström, J., Quantitative Proteogenomics of Human Pathogens Using DIA-MS, J. Proteomics, 129, (2015), 98-107, https://doi.org/10.1016/j.jprot.2015.09.012
  • Mirsky, A., Kazandjian, L., Anisimova, M., Antibody-Specific Model of Amino Acid Substitution for Immunological Inferences from Alignments of Antibody Sequences, Mol. Biol. Evol., 32(3), (2014), 806-819, https://doi.org/10.1093/molbev/msu340
  • Nava, M., Quhe, R., Palazzesi, F., Tiwary, P., Parrinello, M., de Broglie Swapping Metadynamics for Quantum and Classical Sampling, J. Chem. Theory Comput., 11, (2015), 5114-5119, https://doi.org/10.1021/acs.jctc.5b00818
  • Opilik, L., Payamyar, P., Szczerbinski, J., Schütz, A.P., Servalli, M., Hungerland, T., Schlüter, A.D., Zenobi, R., Minimally Invasive Characterization of Covalent Monolayer Sheets Using Tip-Enhanced Raman Spectroscopy, ACS Nano, 9(4), (2015), 4252-4259, https://doi.org/10.1021/acsnano.5b00629
  • Owczarz, M., Casalini, T., Motta, A.C., Morbidelli, M., Arosio, P., Contribution of Electrostatics in the Fibril Stability of a Model IonicComplementary Peptide, Biomacromolecules, 16(12), (2015), 3792-3801, https://doi.org/10.1021/acs.biomac.5b01092
  • Paranjape, A., Kovač, K., Hartley, W.G. Pahwa, I., Correlating Galaxy Colour and Halo Concentration: A Tunable Halo Model of Galactic Conformity, MNRAS, 454, (2015), 3030-3048, https://doi.org/10.1093/mnras/stv2137
  • Perego, C., Salvalaglio, M., Parrinello, M., Molecular Dynamics Simulations of Solutions at Constant Chemical Potential, J. Chem. Phys., 142, 144113, (2015), https://doi.org/10.1063/1.4917200
  • Polino, D., Parrinello, M., Combustion Chemistry via Metadynamics: Benzyl Decomposition Revisited, J. Phys. Chem. A, 119(6), (2015), https://doi.org/10.1021/jp5118807
  • Prentner, R., Quack, M., Stohner, J., Willeke, M., Wavepacket Dynamics of the Axially Chiral Molecule Cl–O–O–Cl under Coherent Radiative Excitation and Including Electroweak Parity Violation, J. Phys. Chem. A, 119(51), (2015), 12805-12822, https://doi.org/10.1021/acs.jpca.5b08958
  • Protesescu, L., Yakunin, S., Bodnarchuk, M.I., Krieg, F., Caputo, R., Hendon, Ch. H., Yang, R.X., Walsh, A., Kovalenko, M.V., Nanocrystals of Cesium Lead Halide Perovskites (CsPbX3, X = Cl, Br, and I): Novel Optoelectronic Materials Showing Bright Emission with Wide Color Gamut, Nano Lett., 15(6), (2015), 3692-3696, https://doi.org/10.1021/nl5048779
  • Rapsomaniki, M.A., Cinquemani, E., Giakoumakis, N.N., Kotsantis, P., Lygeros, J., Lygerou, Z., Inference of Protein Kinetics by Stochastic Modeling and Simulation of Fluorescence Recovery after Photobleaching Experiments, Bioinformatics, 31(3), (2015), 355-362, https://doi.org/10.1093/bioinformatics/btu619
  • Reimer, J., Steele-MacInnis, M., Wambach, J.M., Vogel, F., Ion Association in Hydrothermal Sodium Sulfate Solutions Studied by Modulated FT-IR-Raman Spectroscopy and Molecular Dynamics, J. Phys. Chem. B, 119(30), (2015), 9847-9857, https://doi.org/10.1021/acs.jpcb.5b03192
  • Rossinelli, D., Hejazialhosseini, B., van Rees, W., Gazzola, M., Bergdorf, M., Koumoutsakos, P., MRAG-I2D: Multi-Resolution Adapted Grids for Remeshed Vortex Methods on Multicore Architectures, J. Comput. Phys., 288, (2015), 1-18, https://doi.org/10.1016/j.jcp.2015.01.035
  • Salvalaglio, M., Mazzotti, M., Parrinello, M., Urea Homogeneous Nucleation Mechanism Is Solvent Dependent, Faraday Discuss., 179, (2015), 291-307, https://doi.org/10.1039/C4FD00235K
  • Salvalaglio, M., Perego, C., Giberti, F., Mazzotti, M., Parrinello, M., Molecular-Dynamics Simulations of Urea Nucleation from Aqueous Solution, PNAS, 112(1), (2015), E6-E14, https://doi.org/10.1073/pnas.1421192111
  • Shao, Sh., Guo, T., Koh, Ch.Ch., Gillessen, S., Joerger, M., Jochum, W., Aebersold, R., Minimal Sample Requirement for Highly Multiplexed Protein Quantification in Cell Lines and Tissues by PCT-SWATH Mass Spectrometry, Proteomics, 15(21), (2015), 3711-3721, https://doi.org/10.1002/pmic.201500161
  • Shinaoka, H., Hoshino, Sh., Troyer, M., Werner, Ph., Phase Diagram of Pyrochlore Iridates: All-in–All-out Magnetic Ordering and Non-Fermi-Liquid Properties, Phys. Rev. Lett., 115, 156401, (2015), https://doi.org/10.1103/PhysRevLett.115.156401
  • Shinaoka, H., Nomura, Y., Biermann, S., Troyer, M., Werner, Ph., Negative Sign Problem in Continuous-Time Quantum Monte Carlo: Optimal Choice of Single-Particle Basis for Impurity Problems, Phys. Rev. B, 92, 195126, (2015), https://doi.org/10.1103/PhysRevB.92.195126
  • Tiwary, P., Limongelli, V., Salvalaglio, M., Parrinello, M., Kinetics of Protein–ligand Unbinding: Predicting Pathways, Rates, and Rate-Limiting Steps, PNAS, 112(5),(2015), E386-E391, https://doi.org/10.1073/pnas.1424461112
  • Uehara, A., Shinaoka, H., Motome, Y., Analysis of Charge-Spin-Orbital Fluctuations by Ab Initio Calculation and Random Phase Approximation: Application to Non-coplanar Antiferromagnet Cd2Os2O7, Physcs. Proc., 75, (2015), 495-502, https://doi.org/10.1016/j.phpro.2015.12.062
  • van Driel, M., Krischer, L., Stähler, S.C., Hosseini, K., Nissen-Meyer, T., Instaseis: Instant Global Seismograms Based on a Broadband Waveform Database, Solid Earth, 6, (2015), 701-717, https://doi.org/10.5194/se-6-701-2015
  • van Driel, M., Wassermann, J., Pelties, C., Schiemenz, A., Igel, H., Tilt Effects on Moment Tensor Inversion in the Near Field of Active Volcanoes, Geophys. J. Int., 202, (2015), 1711-1721, https://doi.org/10.1093/gji/ggv209
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  • Wilhelm, M., Davin, E.L., Seneviratne, S.I., Climate Engineering of Vegetated Land for Hot Extremes Mitigation: An Earth System Model Sensitivity Study, J. Geophys. Res. Atmos., 120, (2015), 2612-2623, https://doi.org/10.1002/2014JD022293

2014

  • Allen, S.E., Hsieh, S.-Y., Gutierrez, O., Bode, J.W., Kozlowski, M.C., Concerted Amidation of Activated Esters: Reaction Path and Origins of Selectivity in the Kinetic Resolution of Cyclic Amines via N‑Heterocyclic Carbenes and Hydroxamic Acid Cocatalyzed Acyl Transfer, J. Am. Chem. Soc., 136, (2014), 11783-11791, https://doi.org/10.1021/ja505784w
  • Andresen, J.C., Katzgraber, H.G., Oganesyan, V., Schechter, M., Existence of a Thermodynamic Spin-Glass Phase in the Zero-Concentration Limit of Anisotropic Dipolar Systems, Phys. Rev. X, 4, 041016, (2014), https://doi.org/10.1103/PhysRevX.4.041016
  • Boixo, S., Rønnow, T.F., Isakov, S.V., Wang, Z., Wecker, D., Lidar, D.A., Martinis, J.M., Troyer, M., Evidence for Quantum Annealing with More Than One Hundred Qubits, Nat. Phys., 10, (2014), 218-224, https://doi.org/10.1038/nphys2900
  • Brambilla, A., Frouzakis, C.E., Mantzaras, J., Tomboulides, A., Kerkemeier, S., Boulouchos, K., Detailed Transient Numerical Simulation of H2/air Hetero-/homogeneous Combustion in Platinum-Coated Channels with Conjugate Heat Transfer, Combust. Flame, 161, (2014), 2692-2707, https://doi.org/10.1016/j.combustflame.2014.04.003
  • Carvalho, R., Buzna, L., Bono, F., Masera, M., Arrowsmith, D.K., Helbing, D., Resilience of Natural Gas Networks during Conflicts, Crises and Disruptions, PLoS ONE, 9(3), e90265, (2014), https://doi.org/10.1371/journal.pone.0090265
  • Chen, J., Walther, J.H., Koumoutsakos, P., Strain Engineering of Kapitza Resistance in Few-Layer Graphene, Nano Lett., 14(2), (2014), 819-825, https://doi.org/10.1021/nl404182k
  • Colombi, A., Nissen-Meyer, T., Boschi, L., Giardini, D., Seismic Waveform Inversion for Core–mantle Boundary Topography, Geophys. J. Int., 198, (2014), 55-71, https://doi.org/10.1093/gji/ggu112
  • Crameri, F., Tackley, P.J., Spontaneous Development of Arcuate Single-Sided Subduction in Global 3-D Mantle Convection Models with a Free Surface, J. Geophys. Res. Sol. Ea., 119, (2014), 5921-5942, https://doi.org/10.1002/2014JB010939
  • Cruz-Chu, E.R., Malafeev, A., Pajarskas, T., Pivkin, I.V., Koumoutsakos, P., Structure and Response to Flow of the Glycocalyx Layer, Biophys. J., 106(1), (2014), 232-243, https://doi.org/10.1016/j.bpj.2013.09.060
  • Fox, M., Shuster, D.L., The Influence of Burial Heating on the (U–Th)/He System in Apatite: Grand Canyon Case Study, Earth Planet. Sci. Lett., 397, (2014), 174-183, https://doi.org/10.1016/j.epsl.2014.04.041
  • Giovannetti, G., Casula, M., Werner, Ph., Mauri, F., Capone, M., Downfolding Electron-Phonon Hamiltonians from Ab-Initio Calculations: Application to K3Picene, Phys. Rev. B, 90, 115435, (2014), https://doi.org/10.1103/PhysRevB.90.115435
  • Gukelberger, J., Kozi, E., Pollet, L., Prokof'ev, N., Sigrist, M., Svistunov, B., Troyer, M., p-Wave Superfluidity by Spin-Nematic Fermi Surface Deformation, Phys. Rev. Lett., 113, 195301, (2014), https://doi.org/10.1103/PhysRevLett.113.195301
  • Holme, M.N., Schulz, G., Deyhle, H., Weitkamp, T., Beckmann, F., Lobrinus, J.A., Rikhtegar, F., Kurcuoglu, V., Zanette, I., Saxer, T., Müller, B., Complementary X-Ray Tomography Techniques for Histology-Validated 3D Imaging of Soft and Hard Tissues Using Plaque-Containing Blood Vessels as Examples, Nat. Protoc., 9, (2014), 1401-1415, https://doi.org/10.1038/nprot.2014.091
  • Hung, H.-H., Chua, V., Wang, L., Fiete, G.A., Interaction Effects on Topological Phase Transitions via Numerically Exact Quantum Monte Carlo Calculations, Phys. Rev. B, 89, 235104, (2014), https://doi.org/10.1103/PhysRevB.89.235104
  • Imriška, J., Iazzi, M., Wang, L., Gull, E., Greif, D., Uehlinger, T., Jotzu, G., Tarruell, L., Esslinger, T., Troyer, M., Thermodynamics and Magnetic Properties of the Anisotropic 3D Hubbard Model, Phys. Rev. Lett., 112, 115301, (2014), https://doi.org/10.1103/PhysRevLett.112.115301
  • Iregui, J.O., Corboz, Ph., Troyer, M., Probing the Stability of the Spin-Liquid Phases in the Kitaev-Heisenberg Model Using Tensor Network Algorithms, Phys. Rev. B, 90, 195102, (2014), https://doi.org/10.1103/PhysRevB.90.195102
  • Khan, A., Connolly, J.A.D., Pommier, A., Noir, J., Geophysical Evidence for Melt in the Deep Lunar Interior and Implications for Lunar Evolution, J. Geophys. Res. Planet, 119(10), (2014), 2197-2221, https://doi.org/10.1002/2014JE004661
  • Koyama, T., Khan, A., Kuvshinov, A., Three-Dimensional Electrical Conductivity Structure Beneath Australia from Inversion of Geomagnetic Observatory Data: Evidence for Lateral Variations in Transition-Zone Temperature, Water Content and Melt, Geophys. J. Int, 196, (2014), 1330-1350, https://doi.org/10.1093/gji/ggt455
  • Li, Y., Deschamps, F., Tackley, P.J., Effects of Low-Viscosity Post-Perovskite on the Stability and Structure of Primordial Reservoirs in the Lower Mantle, Geophys. Rev. Lett., 41, (2014), 7089-7097, https://doi.org/10.1002/2014GL061362
  • Li, Y., Deschamps, F., Tackley, P.J., The Stability and Structure of Primordial Reservoirs in the Lower Mantle: Insights from Models of Thermochemical Convection in Three-Dimensional Spherical Geometry, Geophys. J. Int., 199, (2014), 914-930, https://doi.org/10.1093/gji/ggu295
  • Luo, G., Hou, Th.Y., Toward the Finite-Time Blowup of the 3D Axisymmetric Euler Equations: A Numerical Investigation, Multiscale Model. Simul., 12(4), (2014), 1722-1776, https://doi.org/10.1137/140966411
  • Meng, Z.Y.., Hung, H.-H., Lang, Th.C., The Characterization of Topological Properties in Quantum Monte Carlo Simulations of the Kane-Mele-Hubbard Model, Mod. Phys. Lett. B, 28(1), 1430001, (2014), https://doi.org/10.1142/S0217984914300014
  • Parker, R.J., Church, R.P., Davies, M.B., Meyer, M.R., Supernova Enrichment and Dynamical Histories of Solar-Type Stars in Clusters, MNRAS, 437, (2014), 946-958, https://doi.org/10.1093/mnras/stt1957
  • Ren, Zh., Kalscheuer, Th., Greenhalgh, S., Maurer, H., A Finite-Element-Based Domain-Decomposition Approach for Plane Wave 3D Electromagnetic Modeling, Geophysics, 79(6), (2014), E255-E268, https://doi.org/10.1190/geo2013-0376.1
  • Röst, H.L., Rosenberger, G., Navarro, P., Gillet, L., Miladinović, S.M., Schubert, O.T., Wolski, W., Collins, B.C., Malmström, J., Malmström, L., Aebersold, R., OpenSWATH Enables Automated, Targeted Analysis of Data-Independent Acquisition MS Data, Nat. Biotech., 32, (2014), 219-223, https://doi.org/10.1038/nbt.2841
  • Roten D., Fäh, D., Bonilla, F., Quantification of Cyclic Mobility Parameters in Liquefiable Soils from Inversion of Vertical Array Records, B. Seismol. Soc. Am., 104(6), (2014), 3115-3138, https://doi.org/10.1785/0120130329
  • Salvalaglio, M., Tiwary, P., Parrinello, M., Assessing the Reliability of the Dynamics Reconstructed from Metadynamics, J. Chem. Theory Comput., 10(4), (2014), 1420-1425, https://doi.org/10.1021/ct500040r
  • Sternai, P., Jolivet, L., Menant, A., Gerya, T., Driving the Upper Plate Surface Deformation by Slab Rollback and Mantle Flow, Earth Planet. Sci. Lett., 405, (2014), 110-118, https://doi.org/10.1016/j.epsl.2014.08.023
  • Turi, G., Lachkar, Z., Gruber, N., Spatiotemporal Variability and Drivers of pCO2 and Air–sea CO2 Fluxes in the California Current System: An Eddy-Resolving Modeling Study, Biogeosciences, Biogeosciences, 11, (2014), 671-690, https://doi.org/10.5194/bg-11-671-2014
  • van Driel, M., Nissen-Meyer, T., Optimized Viscoelastic Wave Propagation for Weakly Dissipative Media, Geophys. J. Int., 199, (2014), 1078-1093, https://doi.org/10.1093/gji/ggu314
  • van Driel, M., Nissen-Meyer, T., Seismic Wave Propagation in Fully Anisotropic Axisymmetric Media, Geophys. J. Int., 199, (2014), 880-893, https://doi.org/10.1093/gji/ggu269
  • Wang, W., Machta, J., Katzgraber, H.G., Evidence Against a Mean-Field Description of Short-Range Spin Glasses Revealed Through Thermal Boundary Conditions, Phys. Rev. B, 90, 184412, (2014), https://doi.org/10.1103/PhysRevB.90.184412
  • Wischert, R., Florian, P., Copéret, Ch., Massiot, D., Sautet, Ph., Visibility of Al Surface Sites of γ‑Alumina: A Combined Computational and Experimental Point of View, J. Phys. Chem. C, 118(28), (2014), 15292−15299, https://doi.org/10.1021/jp503277m
  • Wisniewska, M., Happonen, L., Kahn, F., Varjosalo, M., Malmström, L., Rosenberger, G., Karlsson, Ch., Cazzamali, G., Pozdnyakova, I., Frick, I.-M., Björck, L., Streicher, W., Malmström, J., Wikström, M., Functional and Structural Properties of a Novel Protein and Virulence Factor (Protein Ship) In Streptococcus Pyogenes, J. Biol. Chem., 289, (2014), 18175-18188, https://doi.org/10.1074/jbc.M114.565978
  • Wittmann, M., Yucesoy, B., Katzgraber, H.G., Machta, J., Young, A.P., Low-Temperature Behavior of the Statistics of the Overlap Distribution in Ising Spin-Glass Models, Phys. Rev. B, 90, 134419, (2014), https://doi.org/10.1103/PhysRevB.90.134419

2013

  • Ahrens, B., Xiao, J., Hartmann, A.K., Katzgraber, H.G., Diluted Antiferromagnets in a Field Seem to Be in a Different Universality Class Than the Random-Field Ising Model, Phys. Rev. B, 88, 174408, (2013), https://doi.org/10.1103/PhysRevB.88.174408
  • Andresen, J.C., Thomas, C.K., Katzgraber, H.G., Schechter, M., Novel Disordering Mechanism in Ferromagnetic Systems with Competing Interactions, Phys. Rev. Lett., 111, 177202, (2013), https://doi.org/10.1103/PhysRevLett.111.177202
  • Andresen, J.C., Zhu, Z., Andrist, R.S., Katzgraber, H.G., Dobrosavljevic, V., Zimanyi, G.T., Self-Organized Criticality in Glassy Spin Systems Requires a Diverging Number of Neighbors, Phys. Rev. Lett., 111, 097203, (2013), https://doi.org/10.1103/PhysRevLett.111.097203
  • Ayral, Th., Biermann, S., Werner, Ph., Screening and Nonlocal Correlations in the Extended Hubbard Model from Self-Consistent Combined GW and Dynamical Mean Field Theory, Phys. Rev. B, 87, 125149, (2013), https://doi.org/10.1103/PhysRevB.87.125149
  • Battich, N., Stoeger, Th., Pelkmans, L., Image-Based Transcriptomics in Thousands of Single Human Cells at Single-Molecule Resolution, Nat. Methods, 10, (2013), 1127-1133, https://doi.org/10.1038/nmeth.2657
  • Bonney, K.J., Proutiere, F., Schoenebeck, F., Dinuclear Pd(i) Complexes—solely Precatalysts? Demonstration of Direct Reactivity of a Pd(i) Dimer with an Aryl Iodide, Chem. Sci., 4, (2013), 4434-4439, https://doi.org/10.1039/C3SC52054D
  • Caputo, R., Exploring the Structure–composition Phase Space of Lithium Borocarbide, LixBC for x ≤ 1, RSC Adv., 3, (2013), 10230-10241, https://doi.org/10.1039/C3RA41396A
  • Chen, L., Gerya, T.V., Zhang, Z.-J., Aitken, A., Li, Z.-H., Liang, X.-F., Formation Mechanism of Steep Convergent Intracontinental Margins: Insights from Numerical Modeling, Geophys. Res. Lett., 40(10), (2013), 2000-2005, https://doi.org/10.1002/grl.50446
  • Chen, L., Gerya, T.V., Zhang, Z., Zhu, G., Duretz, T., Jacoby, W.R., Numerical Modeling of Eastern Tibetan-Type Margin: Influences of Surface Processes, Lithospheric Structure and Crustal Rheology, Gondwana Res., 24, (2013), 1091-1107, https://doi.org/10.1016/j.gr.2013.01.003
  • Coltice, N., Seton, M., Rolf, T., Müller, D.R., Tackley, P.J., Convergence of Tectonic Reconstructions and Mantle Convection Models for Significant Fluctuations in Seafloor Spreading, Earth Planet. Sci. Lett., 383, (2013), 92-100, https://doi.org/10.1016/j.epsl.2013.09.032
  • Corboz, Ph., Lajkó, M., Penc, K., Mila, F., Läuchli, A.M., Competing States in the SU(3) Heisenberg Model on the Honeycomb Lattice: Plaquette Valence-Bond Crystal Versus Dimerized Color-Ordered State, Phys. Rev. B, 87, 195113, (2013), https://doi.org/10.1103/PhysRevB.87.195113
  • Dalquen, D.A., Altenhoff, A.M., Gonnet, G.H., Dessimoz, Ch., The Impact of Gene Duplication, Insertion, Deletion, Lateral Gene Transfer and Sequencing Error on Orthology Inference: A Simulation Study, PLoS ONE, 8(2), e56925, (2013), https://doi.org/10.1371/journal.pone.0056925
  • Duprat-Oualid, S., Yamato, P., Pitra, P., Major Role of Shear Heating in Intracontinental Inverted Metamorphism: Inference from a Thermo-Kinematic Parametric Study, Tectonophysics, 608, (2013), 812-831, https://doi.org/10.1016/j.tecto.2013.07.037
  • Embrechts, P., Hofer, M., Statistical Inference for Copulas in High Dimensions: A Simulation Study, Astin Bull., 43(2), (2013), 81-95, https://doi.org/10.1017/asb.2013.6
  • Gatto, A., Fraternali, F., Read, J.I., Marinacci, F., Lux, H., Walch, S., Unveiling the Corona of the Milky Way via Ram-Pressure Stripping of Dwarf Satellites, MNRAS, 433, (2013), 2749-2763, https://doi.org/10.1093/mnras/stt896
  • Guralnik, B., Jain, M., Herman, F., Paris, R.B., Harrison, T.M., Murray, A.S., Valla, P.G., Rhodes, E.J., Effective Closure Temperature in Leaky And/or Saturating Thermochronometers, Earth Planet. Sci. Lett., 384, (2013), 209-218, https://doi.org/10.1016/j.epsl.2013.10.003
  • He, M., Bode, J.W., E Pluribus Unum: Isolation, Structure Determination, Network Analysis and DFT Studies of a Single Metastable Structure from a Shapeshifting Mixture of 852 Bullvalene Structural Isomers, Org. Biomol. Chem., 11, (2013), 1306-1317, https://doi.org/10.1039/C2OB26954F
  • Hollerbach, R., Nore, C., Marti, P., Vantieghem, S., Luddens, F., Léorat, J., Parity-Breaking Flows in Precessing Spherical Containers, Phys. Rev. E, 87, 0503020, (2013), https://doi.org/10.1103/PhysRevE.87.053020
  • Horný, L., Schaefer, H.F., Ünlü, F., Willeke, M., Theoretical Investigation of the Cyclopropene Radical Cation c-C3H+•4 : Structure, Energetics and Spectroscopic Properties, Mol. Phys., 111, (2013), 2306-2313, https://doi.org/10.1080/00268976.2013.806684
  • Hung, H.-H., Wang, L., Gu, Z.-C., Fiete, G.A., Topological Phase Transition in a Generalized Kane-Mele-Hubbard Model: A Combined Quantum Monte Carlo and Green’s Function Study, Phys. Rev. B, 121113(R), (2013), https://doi.org/10.1103/PhysRevB.87.121113
  • Keller, T., May, D.A., Kaus, B.J.P., Numerical Modelling of Magma Dynamics Coupled to Tectonic Deformation of Lithosphere and Crust, Geophys. J. Int., 195(3), (2013), 1406-1442, https://doi.org/10.1093/gji/ggt306
  • Khan, A., Zunino, A., Deschamps, F., Upper Mantle Compositional Variations and Discontinuity Topography Imaged Beneath Australia from Bayesian Inversion of Surface-Wave Phase Velocities and Thermochemical Modeling, J. Geophys. Res. Sol. Ea., 118(10), (2013), 5285-5306, https://doi.org/10.1002/jgrb.50304
  • Kozik, E., Burovski, E., Scarola, V.W., Troyer, M., Néel Temperature and Thermodynamics of the Half-Filled Three-Dimensional Hubbard Model by Diagrammatic Determinant Monte Carlo, Phys. Rev. B, 87, 205102, (2013), https://doi.org/10.1103/PhysRevB.87.205102
  • Lachkar, Z., Effects of Upwelling Increase on Ocean Acidification in the California and Canary Current Systems, Geophys. Res. Lett., 41, (2013), 90-95, https://doi.org/10.1002/2013GL058726
  • Lachkar, Z., Gruber, N., Response of Biological Production and Air–sea CO2 Fluxes to Upwelling Intensification in the California and Canary Current Systems, J. Marine Syst., 109-110, (2013), 149-160, https://doi.org/10.1016/j.jmarsys.2012.04.003
  • Lacy, A.R., Vogt, A., Boudon, C., Gisselbrecht, J.-P., Schweizer, W.B., Diederich, F., Post-Cycloaddition–Retroelectrocyclization Transformations of Polycyanobutadienes, Eur. J. Org. Chem., 2013, (2013), 869-879, https://doi.org/10.1002/ejoc.201201371
  • Larson, D., Katzgraber, H.G., Moore, M.A., Young, A.P., Spin Glasses in a Field: Three and Four Dimensions as Seen from One Space Dimension, Phys. Rev. B, 87, 024414, (2013), https://doi.org/10.1103/PhysRevB.87.024414
  • Lyngvi, E., Schoenebeck, F., Oxidative Addition Transition States of Pd(0) Complexes in Polar Solvent—a DFT Study Involving Implicit and Explicit Solvation, Tetrahedron, 69, (2013), 5715-5718, https://doi.org/10.1016/j.tet.2013.03.095
  • Matsuda, Y.H., Takeyama, N.A.S., Kageyama, H., Corboz, P., Honecker, A., Manmana, S.R., Foltin, G.R., Schmidt, K.P., Mila, F., Magnetization of SrCu2(BO3)2 in Ultrahigh Magnetic Fields up to 118 T, Phys. Rev. Lett., 111, 137204, (2013), https://doi.org/10.1103/PhysRevLett.111.137204
  • Moonen, P., Gromke, C., Dorer, V., Performance Assessment of Large Eddy Simulation (LES) for Modeling Dispersion in an Urban Street Canyon with Tree Planting, Atmos. Environ., 75, (2013), 66-76, https://doi.org/10.1016/j.atmosenv.2013.04.016
  • Nielsen, M.C., Lyngvi, E., Schoenebeck, F., Chemoselectivity in the Reductive Elimination from High Oxidation State Palladium Complexes – Scrambling Mechanism Uncovered, J. Am. Chem. Soc., 135(5), (2013), 1978-1985, https://doi.org/10.1021/ja312047b
  • Palazzesi, F., Barducci, A., Tollinger, M., Parrinello, M., The Allosteric Communication Pathways in KIX Domain of CBP, PNAS, 110(35), (2013), 14237–14242, https://doi.org/10.1073/pnas.1313548110
  • Parker, R.J., Reggiani, M.M., The Binary Companion Mass Ratio Distribution: An Imprint of the Star Formation Process?, MNRAS, 432, (2013), 2378-2384, https://doi.org/10.1093/mnras/stt600
  • Pavan, G.M., Barducci, A., Albertazzi, L., Parrinello, M., Combining Metadynamics Simulation and Experiments to Characterize Dendrimers in Solution, Soft Matter, 9, (2013), 2593-2597, https://doi.org/10.1039/C3SM27706B
  • Püthe, Ch., Kuvshinov, A., Determination of the 3-D Distribution of Electrical Conductivity in Earth’s Mantle from Swarm Satellite Data: Frequency Domain Approach Based on Inversion of Induced Coefficients, Earth, Planets Sp., 65, 6, (2013), https://doi.org/10.5047/eps.2013.09.004
  • Salvalaglio, M., Vetter, T., Mazzotti, M., Parrinello, M., Controlling and Predicting Crystal Shapes: The Case of Urea, Angew. Chem. Int. Ed., 52, (2013), 13369-13372, https://doi.org/10.1002/anie.201304562
  • Sanhueza, I.A., Wagner, A.M., Sanford, M.S., Schoenebeck, F., On the Role of Anionic Ligands in the Site-Selectivity of Oxidative C–H Functionalization Reactions of Arenes, Chem. Sci., 4, (2013), 2767-2775, https://doi.org/10.1039/C3SC00017F
  • Turi, G., Lachkar, Z., Gruber, N., Spatiotemporal Variability and Drivers of pCO2 and Air–Sea CO2 Fluxes in the California Current System: An Eddy-Resolving Modeling Study, Biogeosciences Disc., 10, (2013), 14043-14091, https://doi.org/10.5194/bgd-10-14043-2013
  • Uehlinger, T., Greif, D., Jotzu, G., Tarruell, L., Esslinger, T., Wang, L., Troyer, M., Double Transfer through Dirac Points in a Tunable Honeycomb Optical Lattice, Eur. Phys. J. Special Topics, 217, (2013), 121-133, https://doi.org/10.1140/epjst/e2013-01761-y
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  • van Dinther, Y., Gerya, T.V., Dalguer, L.A., Mai, P.M., Morra, G., Giardini, D., The Seismic Cycle at Subduction Thrusts: Insights from Seismo-Thermo-Mechanical Models, J. Geophys. Res. Sol. Ea, 118 , (2013), 6183-6202, https://doi.org/10.1002/2013JB010380
  • Wiesinger, J., Sornette, D., Satinover, J., Reverse Engineering Financial Markets with Majority and Minority Games Using Genetic Algorithms, Comput. Econ., 41, (2013), 475-492, https://doi.org/10.1007/s10614-011-9312-9
  • Yarema, M., Caputo, R., Kovalenko, M.V., Precision Synthesis of Colloidal Inorganic Nanocrystals Using Metal and Metalloid Amides, Nanoscale, 5, (2013), 8398-8410, https://doi.org/10.1039/C3NR02076B
  • Yucesoy, B., Machta, J., Katzgraber, H.G., Correlations Between the Dynamics of Parallel Tempering and the Free-Energy Landscape in Spin Glasses, Phys. Rev. E, 87, 012104, (2013), https://doi.org/10.1103/PhysRevE.87.012104

2012

  • Aufiero, M., Proutiere, F., Schoenebeck, F., Redox Reactions in Palladium Catalysis: On the Accelerating and/or Inhibiting Effects of Copper and Silver Salt Additives in CrossCoupling Chemistry Involving Electron-rich Phosphine Ligands, Angew. Chem. Int. Ed., 51, (2012), 7226-7230, https://doi.org/10.1002/anie.201202504
  • Ayral, Th., Werner, Ph., Biermann, S., Spectral Properties of Correlated Materials: Local Vertex and Nonlocal Two-Particle Correlations from Combined GW and Dynamical Mean Field Theory, Phys. Rev. Lett., 109, 226401, (2012), https://doi.org/10.1103/PhysRevLett.109.226401
  • Barylyuk, K., Fritsche, L., Balabin, R.M., Nieckarz, R., Zenobi, R., Gas-Phase Basicity of Several Common MALDI Matrices Measured by a Simple Experimental Approach, RSC Adv., 2, (2012), 1962-1969, https://doi.org/10.1039/C1RA01117K
  • Bauer, B., Corboz, Ph., Läuchli, A.M., Messio, L., Penc, K., Troyer, M., Mila, F., Three-Sublattice Order in the SU(3) Heisenberg Model on the Square and Triangular Lattice, Phys. Rev. B, 85, 125116, (2012), https://doi.org/10.1103/PhysRevB.85.125116
  • Bismuto, A., Terazzi, R., Hinkov, B., Beck, M., Faist, J., Fully Automatized Quantum Cascade Laser Design by Genetic Optimization, Appl. Phys. Lett., 101, 021103, (2012), https://doi.org/10.1063/1.4734389
  • Bombin, H., Andrist, R.S., Ohzeki, M., Katzgraber, H.G., Martin-Delgado, M.A, Strong Resilience of Topological Codes to Depolarization, Phys. Rev. X, 2, 021004, (2012), https://doi.org/10.1103/PhysRevX.2.021004
  • Cincotti, S., Sornette, D., Treleaven, P., Battiston, S., Caldarelli, G, Hommes, C., Kirman, A., An Economic and Financial Exploratory, Eur. Phys. J. Special Topics, 214, (2012), 361-400, https://doi.org/10.1140/epjst/e2012-01699-6
  • Corboz, Ph., Capponi, S., Läuchli, A.M., Bauer, B., Orús, R., Comment on “Topological Quantum Phase Transitions of Attractive Spinless Fermions in a Honeycomb Lattice” By Poletti D. et al., EPL, 98, 27005, (2012), https://doi.org/10.1209/0295-5075/98/27005
  • Corboz, Ph., Penc, K., Mila, F., Läuchli, A.M., Simplex Solids in SU(N) Heisenberg Models on the Kagome and Checkerboard Lattices, Phys. Rev. B, 86, 041106(R), (2012), https://doi.org/10.1103/PhysRevB.86.041106
  • Deschamps, F., Yao, Ch., Tackley, P.J., Sanchez-Valle, C., High Rayleigh Number Thermal Convection in Volumetrically Heated Spherical Shells, J. Geophys. Res. Planet, 117, E09006, (2012), https://doi.org/10.1029/2012JE004090
  • Glöss, A., Brändler, M.P., Klopper, W., Lüthi, H.P., The MP2 Binding Energy of the Ethene Dimer and Its Dependence on the Auxiliary Basis Sets: A Benchmark Study Using a Newly Developed Infrastructure for the Processing of Quantum Chemical Data, Mol. Phys., 110, (2012), 2523-2534, https://doi.org/10.1080/00268976.2012.708793
  • Gonnet, P., Pairwise Verlet Lists: Combining Cell Lists and Verlet Lists to Improve Memory Locality and Parallelism, J. Comput. Chem., 33(1), (2012), 76-81, https://doi.org/10.1002/jcc.21945
  • Hafermann, H., Patton, K.R., Werner, Ph., Improved Estimators for the Self-Energy and Vertex Function in Hybridization-Expansion Continuous-Time Quantum Monte Carlo Simulations, Phys. Rev. B, 85, 205106, (2012), https://doi.org/10.1103/PhysRevB.85.205106
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  • Hiroi, N., Klann, M., Iba, K., de Heras Ciechomski, P., Yamashita, Sh., Tabira, A., Okuhara, T., Kubojima, T., Okada, Y., Oka, K., Mange, R., Unger, M., Funahashi, A., Koeppl, H., From Microscopy Data to In Silico Environments for In Vivo-Oriented Simulations, J. Bioninform. Sys. Biology, 2012, 7, (2012), https://doi.org/10.1186/1687-4153-2012-7
  • Katzgraber, H.G., Janzen, K., Thomas, C.K., Boolean Decision Problems with Competing Interactions on Scale-Free Networks: Critical Thermodynamics, Phys. Rev. E, 86, 031116, (2012), https://doi.org/10.1103/PhysRevE.86.031116
  • Khan, A., Shankland, T.J., A Geophysical Perspective on Mantle Water Content and Melting: Inverting Electromagnetic Sounding Data Using Laboratory-Based Electrical Conductivity Profiles, Earth Planet. Sci. Lett., 317-318, (2012), 27-43, https://doi.org/10.1016/j.epsl.2011.11.031
  • Kuvshinov, A., Semenov, A., Global 3-D Imaging of Mantle Electrical Conductivity Based on Inversion of Observatory C-Responses—I. An Approach and Its Verification, Geophys. J. Int., 189, (2012), 1335-1352, https://doi.org/10.1111/j.1365-246X.2011.05349.x
  • Livermore, P.W., Hollerbach, R., Successive Elimination of Shear Layers by a Hierarchy of Constraints in Inviscid Spherical-Shell Flows, J. Math. Phys., 53, 073104, https://doi.org/10.1063/1.4736990
  • Lyngvi, E., Bode, J.W., Schoenebeck, F., A Computational Study of the Origin of Stereoinduction in NHC-Catalyzed Annulation Reactions of α,β-Unsaturated Acyl Azoliums, Chem. Sci., 3(3), (2012), 2346-2350, https://doi.org/10.1039/C2SC20331F
  • Mercer, J., Snijder, B., Sacher, R., Burkard, Ch., Bleck, Ch.K.E., Stahlberg, H., Pelkmans, L., Helenius, A., RNAi Screening Reveals Proteasome- and Cullin3-Dependent Stages in Vaccinia Virus Infection, Cell Rep., 2(4), (2012), 1036-1047, https://doi.org/10.1016/j.celrep.2012.09.003
  • Mishra, S., Schwab, Ch., Šukys, J., Multi-Level Monte Carlo Finite Volume Methods for Nonlinear Systems of Conservation Laws in Multi-Dimensions, J. Comput Phys., 231(8), (2012), 3365-3388, https://doi.org/10.1016/j.jcp.2012.01.011
  • Mishra, S., Schwab, Ch., Sukys, J., Multilevel Monte Carlo Finite Volume Methods for Shallow Water Equations with Uncertain Topography in Multi-dimensions, SIAM J. Sci. Comput., 34, (2012), B761-B784, https://doi.org/10.1137/110857295
  • Misselwitz, B., Barrett, N., Kreibich, S., Vonaesch, P., Andritschke, D., Rout, S., Weidner, K., Sormaz, M., Songhet, P., Horvath, P., Chabria, M., Vogel, V., Spori, D.M., Jenny, P., Hardt, W.-D., Near Surface Swimming of Salmonella Typhimurium Explains Target-Site Selection and Cooperative Invasion, PLoS Pathog., 8(7), e1002810, (2012), https://doi.org/10.1371/journal.ppat.1002810
  • Peleg, O., Savin, Th., Kolmakov, G.V., Salib, I.G., Balazs, A.C., Kröger, M., Fibers with Integrated Mechanochemical Switches: Minimalistic Design Principles Derived from Fibronectin, Biophys. J., 103(9), (2012), 1909-1918, https://doi.org/10.1016/j.bpj.2012.09.028
  • Proutiere, F., Aufiero, M., Schoenebeck, F., Reactivity and Stability of Dinuclear Pd(I) Complexes: Studies on the Active Catalytic Species, Insights into Precatalyst Activation and Deactivation, and Application in Highly Selective Cross-Coupling Reactions, J. Am. Chem. Soc., 134(1), (2012), 606-612, https://doi.org/10.1021/ja209424z
  • Rolf, T., Coltice, N., Tackley, P.J., Linking Continental Drift, Plate Tectonics and the Thermal State of the Earth’s Mantle, Earth Planet. Sci. Lett., 351-352, (2012), 134-146, https://doi.org/10.1016/j.epsl.2012.07.011
  • Salvalaglio, M., Vetter, Th., Giberti, F., Mazzotti, M., Parrinello, M., Uncovering Molecular Details of Urea Crystal Growth in the Presence of Additives, J. Am. Chem. Soc., 134(41), (2012), 17221-17233, https://doi.org/10.1021/ja307408x
  • Snijder, B., Sacher, R., Rämö, P., Liberali, P., Mench, K., Wolfrum, N., Burleigh, L., Scott, C.C., Verheije, M.H., Mercer, J., Moese, S., Herger, Th., Theusner, K., Jurgeit, A., Lamparter, D., Balistreri, G., Schelhaas, M., De Haan, C.A.M., Marjomäki, V., Hyypiä, T., Rottier, P.J.M., Sodeik, B., Marsh, M., Gruenberg, J., Amara, A., Greber, U., Helenius, A., Pelkmans, L., Single-Cell Analysis of Population Context Advances RNAi Screening at Multiple Levels, Mol. Syst. Biol., 8, 579, (2012), https://doi.org/10.1038/msb.2012.9
  • Söderhjelm, P., Tribello, G.A., Parrinello, M., Locating Binding Poses in Protein-Ligand Systems Using Reconnaissance Metadynamics, PNAS, 109(14), 5170-5175, (2012), https://doi.org/10.1073/pnas.1201940109
  • Tancini, F., Wu, Y.-L., Schweizer, W.B., Gisselbrecht, J.-P., Boudon, C., Jarowski, P.D., Beels, M.T., Biaggio, I., Diederich, F., 1,1-Dicyano-4-[4-(diethylamino)phenyl]buta-1,3-dienes: Structure–Property Relationships, Eur. J. Org. Chem., 2012, (2012), 2756-2765, https://doi.org/10.1002/ejoc.201200111
  • Van Houcke, K., Werner, F., Kozik, E., Prokof'ev, N., Svistunov, B., Ku, M.J.H., Sommer, A.T., Cheuk, L.W., Schirotzek, A., Zwierlein, M.W., Feynman Diagrams Versus Fermi-Gas Feynman Emulator, Nat. Phys., 8, (2012), 366-370, https://doi.org/10.1038/nphys2273
  • Verdolino, V., Baldini, L., Palazzesi, F., Giberti, F., Parrinello, M., Combined Computational and Experimental NMR Study of Calix[4]arene Derivatives, J. Phys. Chem. C, 116(44), (2012), 23441-23452, https://doi.org/10.1021/jp307895x
  • Weis, P., Driesner, T., Heinrich, C.A., Porphyry-Copper Ore Shells Form at Stable Pressure-Temperature Fronts Within Dynamic Fluid Plumes, Science, 338, (2012), 1613-1616, https://doi.org/10.1126/science.1225009
    (Reference to Brutus is in the supplementary material)
  • Werner, Ph., Casula, M., Miyake, T., Aryasetiawan, F., Millis, A.J., Biermann, S., Satellites and Large Doping and Temperature Dependence of Electronic Properties in Hole-Doped BaFe2As2, Nature Phys., 8, (2012), 331-337, https://doi.org/10.1038/nphys2250
  • Wischert, R., Laurent, P., Copéret, Ch., Delbecq, F., Sautet, Ph., γ-Alumina: The Essential and Unexpected Role of Water for the Structure, Stability, and Reactivity of “Defect” Sites, J. Am. Chem. Soc., 134(35), (2012), 14430-14449, https://doi.org/10.1021/ja3042383
  • Wu, Y.-L., Tancini, F., Schweizer, W.B., Paunescu, D., Boudon, C., Gisselbrecht, J.-P., Jarowski, P.D., Dalcanale, E., Diederich, F., Proacetylenic Reactivity of a Push–Pull Buta-1,2,3-triene: New Chromophores and Supramolecular Systems, Chem. Asian J., 2012, (2012), 1185-1190, https://doi.org/10.1002/asia.201100997
  • Zhang, X., Hu, M., Giapis, K.P., Poulikakos, D., Schemes for and Mechanisms of Reduction in Thermal Conductivity in Nanostructured Thermoelectrics, J. Heat Transf., 134(10), 102402, (2012), https://doi.org/10.1115/1.4006750
  • Zhang, X., Hu, M., Poulikakos, D., A Low-Frequency Wave Motion Mechanism Enables Efficient Energy Transport in Carbon Nanotubes at High Heat Fluxes, Nano Lett., 12(7), (2012), 3410-3416, https://doi.org/10.1021/nl300261r
  • Zhou, L., Li, Z., Zou, Y., Wang, Q., Sanhueza, I.A., Schoenebeck, F., Goeke, A., Tandem Nucleophilic Addition/Oxy-2-azonia-Cope Rearrangement for the Formation of Homoallylic Amides and Lactams: Total Synthesis and Structural Verification of Motuporamine G, J. Am. Chem. Soc., 134(49), (2012), https://doi.org/10.1021/ja310002m

2011

  • Andanson, J.-M., Beier, M.J., Baiker, A., Binary Ionic Liquids with a Common Cation: Insight into Nanoscopic Mixing by Infrared Spectroscopy, J. Phys. Chem. Lett., 2, (2011), 2959-2964, https://doi.org/10.1021/jz201323a
  • Andrist, R.S., Katzgraber, H.G., Bombin, H., Martin-Delgado, M.A., Tricolored Lattice Gauge Theory with Randomness: Fault Tolerance in Topological Color Codes, New J. Phys., 13, 083006, (2011), https://doi.org/10.1088/1367-2630/13/8/083006
  • Anstaett, Ph., Schoenebeck, F., Reductive Elimination of ArCF3 from Bidentate PdII Complexes: A Computational Study, Chem. Eur. J., 17, (2011), 12340-12346, https://doi.org/10.1002/chem.201101373
  • Barducci, A., Bonomi, M., Derreumaux, Ph., Assessing the Quality of the OPEP Coarse-Grained Force Field, J. Chem. Theory Comput., 7(6), (2011), 1928-1934, https://doi.org/10.1021/ct100646f
  • Blanco-Quintero, I.F., Gerya, T.V., García‐Casco, A., Castro, An., Subduction of Young Oceanic Plates: A Numerical Study with Application to Aborted Thermal‐Chemical Plumes, Geochem. Geophys. Geosyst., 12(10), Q10012, (2011), https://doi.org/10.1029/2011GC003717
  • Corboz, Ph., Läuchli, A.M., Penc, K., Troyer, M., Mila, F., Simultaneous Dimerization and SU(4) Symmetry Breaking of 4-Color Fermions on the Square Lattice, Phys. Rev. Lett., 107, 215301, (2011), https://doi.org/10.1103/PhysRevLett.107.215301
  • Deschamps, F., Kaminski, E., Tackley, P.J., A Deep Mantle Origin for the Primitive Signature of Ocean Island Basalt, Nat. Geosci., 4, (2011), 8799-882, https://doi.org/10.1038/ngeo1295
  • Dessimoz, Ch., Zoller, S., Manousaki, T., Qiu, H., Meyer, A., Kuraku, Sh., Comparative Genomics Approach to Detecting Split-Coding Regions in a Low-Coverage Genome: Lessons from the Chimaera Callorhinchus Milii (Holocephali, Chondrichthyes), Brief. Bioinofm., 12(5), (2011), 474-484, https://doi.org/10.1093/bib/bbr038
  • Endres, M., Cheneau, M., Fukuhara, T., Weitenberg, C., Schauss, P., Gross, C., Mazza, L., Bañuls, M.C., Pollet, L., Bloch, I., Kuhr, S., Observation of Correlated Particle-Hole Pairs and String Order in Low-Dimensional Mott Insulators, Science, 334, (2011), 200-203, https://doi.org/10.1126/science.1209284
  • Fuchs, S., Gull, E., Pollet, L., Burovski, E., Kozik, E., Pruschke, Th., Troyer, M., Thermodynamics of the 3D Hubbard Model on Approaching the Néel Transition, Phys. Rev. Lett., 106, 030401, (2011), https://doi.org/10.1103/PhysRevLett.106.030401
  • Ganesh, R., Isakov, S.V., Paramekanti, A., Néel to Dimer Transition in Spin-S Antiferromagnets: Comparing Bond Operator Theory with Quantum Monte Carlo Simulations for Bilayer Heisenberg Models, Phys. Rev. B, 84, 214412, (2011), https://doi.org/10.1103/PhysRevB.84.214412
  • Goicochea, J.V., Hu, M., Michel, B., Poulikakos, D., Surface Functionalization Mechanisms of Enhancing Heat Transfer at Solid-Liquid Interfaces, J. Heat Transf., 133(8), 082401, (2011), https://doi.org/10.1115/1.4003533
  • Grasso, G.I., Arena, G., Bellia, F., Maccarrone, G., Parinello, M., Pietropaolo, A., Vecchio, G., Rizzarelli, E., Intramolecular Weak Interactions in the Thermodynamic Stereoselectivity of Copper(II) Complexes with Carnosine–Trehalose Conjugates, Chem. Eur. J., 17, (2011), 9448-9455, https://doi.org/10.1002/chem.201100313
  • Gull, E., Staar, P., Fuchs, S., Nukala, Ph., Summers, M.S., Pruschke, T., Schulthess, T.C., Maier, Th., Submatrix Updates for the Continuous-Time Auxiliary-Field Algorithm, Phys. Rev. B, 83, 075122, (2011), https://doi.org/10.1103/PhysRevB.83.075122
  • Helmuth, J.A., Reboux, S., Sbalzarini, I.F., Exact Stochastic Simulations of Intra-Cellular Transport by Mechanically Coupled Molecular Motors, J. Comput. Sci., 2(4), (2011), 324-334, https://doi.org/10.1016/j.jocs.2011.08.006
  • Horta, B.A.C., Fuchs, P.F.J., van Gunsteren, W.F., Hünenberger, Ph.H., New Interaction Parameters for Oxygen Compounds in the GROMOS Force Field: Improved Pure-Liquid and Solvation Properties for Alcohols, Ethers, Aldehydes, Ketones, Carboxylic Acids, and Esters, J. Chem. Theory Comput., 7(4), (2011), 1016-1031, https://doi.org/10.1021/ct1006407
  • Hu, M., Giapis, K.P., Goicochea, J.V., Zhang, X., Poulikakos, D., Significant Reduction of Thermal Conductivity in Si/Ge Core−Shell Nanowires, Nano Lett., 11(2), (2011), 618-623, https://doi.org/10.1021/nl103718a
  • Hu, M., Giapis, K.P., Poulikakos, D., Interfacial Mixing During Annealing of Zinc Oxide Nanoparticle Junctions, Appl. Phys. Lett., 98, 211904, (2011), http://dx.doi.org/10.1063/1.3593487
  • Hutter, C., Zenklusen, A., Kuhn, S., von Rohr, Ph.R., Large Eddy Simulation of Flow Through a Streamwise-Periodic Structure, Chem. Eng. Soc., 66(3), (2011), 519-529, https://doi.org/10.1016/j.ces.2010.11.015
  • Isakov, S.V., Hastings, M.B., Melko, R.G., Topological Entanglement Entropy of a Bose–Hubbard Spin Liquid, Nature Phys., 7, (2011), 772-775, https://doi.org/10.1038/nphys2036
  • Kappeler, R., Kaspar, P., Jackel, H., Loss-Relevant Structural Imperfections in Substrate-Type Photonic Crystal Waveguides, J. Lightwave Technol., 29(21), (2011), 3156-3166, https://doi.org/10.1109/JLT.2011.2167218
  • Khan, A, Zunino, A., Deschamps, F., The Thermo-Chemical and Physical Structure Beneath the North American Continent from Bayesian Inversion of Surface-Wave Phase Velocities, J. Geophys. Res. Sol. Ea., 116(9), JB008380, (2011), http://dx.doi.org/10.1029/2011JB008380
  • Lachkar, Z., Gruber, N., What Controls Biological Production in Coastal Upwelling Systems? Insights from a Comparative Modeling Study, Biogeosciences, 8, (2011), 2961-2976, https://doi.org/10.5194/bg-8-2961-2011
  • Misselwitz, B., Dilling, S., Vonaesch, P., Sacher, R., Snijder, B., Schlumberger, M., Rout, S., Stark, M., von Mering, Ch., Pelkmans, L., Hardt, W.-D., RNAi Screen of Salmonella Invasion Shows Role of COPI in Membrane Targeting of Cholesterol and Cdc42, Mol. Syst. Biol., 7(1), 474, (2011), https://doi.org/10.1038/msb.2011.7
  • Misselwitz, B., Kreibich, S.K., Rout, S., Stecher, B., Periaswamy, B., Hardt, W.-D., Salmonella Enterica Serovar Typhimurium Binds to HeLa Cells via Fim-Mediated Reversible Adhesion and Irreversible Type Three Secretion System 1-Mediated Docking, Infect. Immun., 79(1), (2011), 330-341, https://doi.org/10.1128/IAI.00581-10
  • Nakagawa, T., Effect of a Stably Stratified Layer Near the Outer Boundary in Numerical Simulations of a Magnetohydrodynamic Dynamo in a Rotating Spherical Shell and Its Implications for Earth’s Core, Phys. Earth Planet. In., 187, (2011), 342-352, https://doi.org/10.1016/j.pepi.2011.06.001
  • Nakagawa, T., Tackley, P.J., Effects of Low-Viscosity Post-Perovskite on Thermo-Chemical Mantle Convection in a 3-D Spherical Shell, Geophys. Rev. Lett., 38(4), L04309, (2011), https://doi.org/10.1029/2010GL046494
  • Ohzeki, M., Thomas, C.K., Katzgraber, H.G., Bombin, H., Martin-Delgado, M.A., Universality in Phase Boundary Slopes for Spin Glasses on Self-Dual Lattices, J. Stat. Mech., 2011, P02004, (2011), https://doi.org/10.1088/1742-5468/2011/02/P02004
  • Pietropaolo, A., Branduardi, D., Bonomi, M., Parrinello, M., A Chirality-Based Metrics for Free-Energy Calculations in Biomolecular Systems, J. Comput. Chem., 32, (2011), 2627-2637, https://doi.org/10.1002/jcc.21842
  • Proutiere, F., Schoenebeck, F., Solvent Effect on Palladium-Catalyzed Cross-Coupling Reactions and Implications on the Active Catalytic Species, Angew. Chem. Int. Ed., 50, (2011), 8192-8195, http://dx.doi.org/10.1002/anie.201101746
  • Rossinelli, D., Conti, Ch., Koumoutsakos, P., Mesh–Particle Interpolations on Graphics Processing Units and Multicore Central Processing Units, Phil. Trans. R. Soc. A, 369, (2011), 2164-2175, https://doi.org/10.1098/rsta.2011.0074
  • Rossinelli, D., Hejazialhosseini, B., Spampinato, D.G., Koumoutsakos, P., Multicore/Multi-GPU Accelerated Simulations of Multiphase Compressible Flows Using Wavelet Adapted Grids, SIAM J. Sci. Comput., 33(2), 512-540, https://doi.org/10.1137/100795930
  • Yang, K.-Y., Kozik, E., Wang, X., Troyer, M., Diagrammatic Quantum Monte Carlo Solution of the Two-Dimensional Cooperon-Fermion Model, Phys. Rev. B, 93, 214516, (2011), https://doi.org/10.1103/PhysRevB.83.214516

2010

  • Bakr, W.S., Peng, A., Tai, M.E., Ma, R., Simon, J., Gillen J.I., Fölling, S., Pollet, L., Greiner, M., Probing the Superfluid–to–Mott Insulator Transition at the Single-Atom Level, Science, 329, (2010), 547-550, https://doi.org/10.1126/science.1192368
  • Eckstein, M., Kollar, M., Werner, Ph., Interaction Quench in the Hubbard Model: Relaxation of the Spectral Function and the Optical Conductivity, Phys. Rev. B, 81, 115131, (2010), https://doi.org/10.1103/PhysRevB.81.115131
  • Eckstein, M., Werner, Ph., Nonequilibrium Dynamical Mean-Field Calculations Based on the Noncrossing Approximation and Its Generalizations, Phys. Rev. B, 82, 115115, (2010), https://doi.org/10.1103/PhysRevB.82.115115
  • Gull, E., Ferrero, M., Parcollet, O., Georges, A., Millis, A.J., Momentum-Space Anisotropy and Pseudogaps: A Comparative Cluster Dynamical Mean-Field Analysis of the Doping-Driven Metal-Insulator Transition in the Two-Dimensional Hubbard Model, Phys. Rev. B, 82, 155101, (2010), https://doi.org/10.1103/PhysRevB.82.155101
  • Gull, E., Reichman, D.R., Millis, A.J., Bold-Line Diagrammatic Monte Carlo Method: General Formulation and Application to Expansion Around the Noncrossing Approximation, Phys. Rev. B, 82, 075109, (2010), https://doi.org/10.1103/PhysRevB.82.075109
  • Hu, M., Giapis, K.P., Goicochea, J.V., Poulikakos, D., Surface Segregation of Bimetallic Alloys in Nanoscale Confinement, Appl. Phys. Lett., 97, 153107, (2010), https://doi.org/10.1063/1.3500825
  • Hu, M., Goicochea, J.V., Michel, B., Poulikakos, D., Water Nanoconfinement Induced Thermal Enhancement at Hydrophilic Quartz Interfaces, Nano Lett., 10(1), (2010), 279-285, https://doi.org/10.1021/nl9034658
  • Hu, M., Poulikakos, D., Grigoropoulos, C.P., Pan, H., Recrystallization of Picosecond Laser-Melted ZnO Nanoparticles in a Liquid: A Molecular Dynamics Study, J. Chem. Phys., 132, 164504, (2010), https://doi.org/10.1063/1.3407438
  • Katzgraber, H.G., Bombin, H., Andrist, R.S., Martin-Delgado, M.A., Topological Color Codes on Union Jack Lattices: a Stable Implementation of the Whole Clifford Group, Phys. Rev. A, 81, 012319, (2010), https://doi.org/10.1103/PhysRevA.81.012319
  • Larson, D., Katzgraber, H.G., Moore, M.A., Young, A.P., Numerical Studies of a One-Dimensional Three-Spin Spin-Glass Model with Long-Range Interactions, Phys. Rev. B, 81, 064415, https://doi.org/10.1103/PhysRevB.81.064415
  • Lin, N., Gull, E., Millis, A.J., Physics of the Pseudogap in Eight-Site Cluster Dynamical Mean-Field Theory: Photoemission, Raman Scattering, and In-Plane and c-Axis Conductivity, Phys. Rev. B, 82, 045104, (2010), https://doi.org/10.1103/PhysRevB.82.045104
  • Ma, P.N., Pollet, L., Troyer, M., Measuring the Equation of State of Trapped Ultracold Bosonic Systems in an Optical Lattice with in Situ Density Imaging, Phys. Rev. A, 82, 033627, (2010), https://doi.org/10.1103/PhysRevA.82.033627
  • Mayer, L., Kazantzidis, S., Escala, A., Callegari, S., Direct Formation of Supermassive Black Holes via Multi-Scale Gas Inflows in Galaxy Mergers, Nature, 466, (2010), 1082-1084, https://doi.org/10.1038/nature09294
  • Misselwitz, B., Strittmatter, G., Periaswamy, B., Schlumberger, M.C., Rout, S., Horvath, P., Kozak, K., Hardt, W.-D., Enhanced CellClassifier: a Multi-Class Classification Tool for Microscopy Images, BMC Bioinformatics, 11, 30, (2010), https://doi.org/10.1186/1471-2105-11-30
  • Nakagawa, T., Tackley, P.J., Influence of Initial Cmb Temperature and Other Parameters on the Thermal Evolution of Earth’s Core Resulting From Thermochemical Spherical Mantle Convection, Geochem. Geophys. Geosyst., 11(6), Q06001, (2010), https://doi.org/10.1029/2010GC003031
  • Nakagawa, T., Tackley, P.J., Deschamps, F., Connolly, J.A.D., The Influence of MORB and Harzburgite Composition on Thermo-Chemical Mantle Convection in a 3-D Spherical Shell with Self-Consistently Calculated Mineral Physics, Earth Planet. Sci. Lett., 296, (2010), 403-412, https://doi.org/10.1016/j.epsl.2010.05.026
  • Rossinelli, D., Hejazialhosseini, B., Bergdorf, M., Koumoutsakos, P., Wavelet-Adaptive Solvers on Multi-Core Architectures for the Simulation of Complex Systems, Concurr. Comp. Pract. E., 23(2), (2010), 172-186, https://doi.org/10.1002/cpe.1639
  • Trotzky, S., Pollet, L., Gerbier, F., Schnorrberger, U., Bloch, I., Prokof'ev, N.V., Svistunov, B., Troyer, M., Suppression of the Critical Temperature for Superfluidity Near the Mott Transition, Nat. Phys., 6, (2010), 998-1004, https://doi.org/10.1038/nphys1799
  • Valla, P.G., Herman, F., van der Beek, P.A., Braun, J., Inversion of Thermochronological Age-Elevation Profiles to Extract Independent Estimates of Denudation and Relief History — I: Theory and Conceptual Model, Earth Planet. Sc. Lett., 295, (2010), 511-522, https://doi.org/10.1016/j.epsl.2010.04.033
  • Werner, Ph., Millis, A.J., Dynamical Screening in Correlated Electron Materials, Phys. Rev. Lett., 104, 146401, (2010), https://doi.org/10.1103/PhysRevLett.104.146401
  • Werner, Ph., Oka, T., Eckstein, M., Millis, A.J., Weak-Coupling Quantum Monte Carlo Calculations on the Keldysh Contour: Theory and Application to the Current-Voltage Characteristics of the Anderson Model, Phys. Rev. B, 81, 035108, (2010), https://doi.org/10.1103/PhysRevB.81.035108
  • Yamada, M., Schweizer, W.B., Schönebeck, F., Diederich, F., Unprecedented Thermal Rearrangement of Push–pull-Chromophore–[60]fullerene Conjugates: Formation of Chiral 1,2,9,12-Tetrakis-Adducts, Chem. Commun., 46, (2010), 5334-5336, https://doi.org/10.1039/C0CC00881H

2009

  • Bonomi, M., Barducci, A., Parrinello, M., Reconstructing the Equilibrium Boltzmann Distribution from Well-Tempered Metadynamics, J. Comput. Chem., 30, (2009), 1615-1621, https://doi.org/10.1002/jcc.21305
  • Gull, E., Parcollet, O., Werner, Ph., Millis, A.J., Momentum-Sector-Selective Metal-Insulator Transition in the Eight-Site Dynamical Mean-Field Approximation to the Hubbard Model in Two Dimensions, Phys. Rev. B, 80, 245102, (2009), https://doi.org/10.1103/PhysRevB.80.245102
  • Hu., M., Goicochea, J.V., Michel, B., Poulikakos, D., Thermal Rectification at Water/Functionalized Silica Interfaces, Appl. Phys. Lett., 95, 151903, (2009), https://doi.org/10.1063/1.3247882
  • Läuchli, A.M., Werner, Ph., Krylov Implementation of the Hybridization Expansion Impurity Solver and Application to 5-Orbital Models, Phys. Rev. B, 80, 235117, (2009), https://doi.org/10.1103/PhysRevB.80.235117
  • Lin, N., Gull, E., Millis, A.J., Optical Conductivity from Cluster Dynamical Mean-Field Theory: Formalism and Application to High-Temperature Superconductors, Phys. Rev. B, 80, 161105(R), (2009), https://doi.org/10.1103/PhysRevB.80.161105
  • Pollet, L., Prokof'ev, N.V., Svistunov, B.V., Troyer, M., Absence of a Direct Superfluid to Mott Insulator Transition in Disordered Bose Systems, Phys. Rev. Lett., 103, 140402, (2009), https://doi.org/10.1103/PhysRevLett.103.140402
  • Söyler, Ş.G., Kuklov, A.B., Pollet, L., Prokof'ev, N.V., Svistunov, B.V., Underlying Mechanism for the Giant Isochoric Compressibility of Solid 4He: Superclimb of Dislocations, Phys. Rev. Lett., 103, 175301, (2009), https://doi.org/10.1103/PhysRevLett.103.175301
  • Werner, Ph., Gull, E., Millis, A.J., Metal-Insulator Phase Diagram and Orbital Selectivity in Three-Orbital Models with Rotationally Invariant Hund Coupling, Phys. Rev. B, 79, 115119, (2009), https://doi.org/10.1103/PhysRevB.79.115119
  • Werner, Ph., Gull, E., Parcollet, O., Millis, A.J., Momentum-Selective Metal-Insulator Transition in the Two-Dimensional Hubbard Model: An 8-Site Dynamical Cluster Approximation Study, Phys. Rev. B, 80, 045120, (2009), https://doi.org/10.1103/PhysRevB.80.045120

2008

  • Gerbier, F., Trotzky, S., Fölling, S., Schnorrberger, U., Thompson, J.D., Widera, A., Bloch, I., Pollet, L., Troyer, M., Capogrosso-Sansone, B., Prokof'ev, N.V., Svistunov, B.V., Expansion of a Quantum Gas Released from an Optical Lattice, Phys. Rev. Lett., 101, 155303, (2008), https://doi.org/10.1103/PhysRevLett.101.155303
  • Gull, E., Werner, Ph., Wang, X., Troyer, M., Millis, A.J., Local Order and the Gapped Phase of the Hubbard Model: A Plaquette Dynamical Mean-Field Investigation, EPL, 84, 37009, (2008), https://doi.org/10.1209/0295-5075/84/37009

Publications referencing the HPC team without specifying the cluster that was used

2022

  • Cai, Zh.-F., Käser, T., Kumar, N., Zenobi, R., Visualizing On-Surface Decomposition Chemistry at the Nanoscale Using Tip-Enhanced Raman Spectroscopy, J. Phys. Chem. Lett., 13, (2022), 4864-4870, https://doi.org/10.1021/acs.jpclett.2c01112
  • Cai, Zh.-F., Merino, J.P., Fang, W., Kumar, N., Richardson, J.O., De Feyter, S., Zenobi, R., Molecular-Level Insights on Reactive Arrangement in On-Surface Photocatalytic Coupling Reactions Using Tip-Enhanced Raman Spectroscopy, J. Am. Chem. Soc., 144, (2022), 538-546, https://doi.org/10.1021/jacs.1c11263
  • Shao, F., Zheng, L., Lan, J., Zenobi, R., Nanoscale Chemical Imaging of Coadsorbed Thiolate Self-Assembled Monolayers on Au(111) by Tip-Enhanced Raman Spectroscopy, Anal. Chem., 94, (2022), 1645-1653, https://doi.org/10.1021/acs.analchem.1c03968
  • Zheng, L.-Q., Yang, S., Krähenbühl, S., Rybkin, V.V, Lan, J., Aprahamian, I., Zenobi, R., Effect of the Alkyl Linker Length on the Photoisomerization of Hydrazone Switches on Metal Surfaces, Mater. Today Chem., 24, 100797, (2022)

2021

  • Bartolomeo, G.L., Zhang, Y., Kumar, N., Zenobi, R., Molecular Perturbation Effects in AFM-Based Tip-Enhanced Raman Spectroscopy: Contact versus Tapping Mode, Anal. Chem., 93, (2021), 15358-15364, https://doi.org/10.1021/acs.analchem.1c03004
  • Cai, Zh.-F., Zheng, L.-Q., Zhang, Y., Zenobi, R., Molecular-Scale Chemical Imaging of the Orientation of an OnSurface Coordination Complex by Tip-Enhanced Raman Spectroscopy, J. Am. Chem. Soc., 143, (2021), 12380-12386, https://doi.org/10.1021/jacs.1c06366
  • Klose, D., Holla, A., Gmeiner, Ch., Nettels, D., Ritsch, I., Bross, N., Yulikov, M., Allain, F.H.-T., Schuler, B., Jeschke, G., Resolving Distance Variations by Single-Molecule FRET and EPR Spectroscopy Using Rotamer Libraries, Biophys. J., 120(21), (2021), 4842-4858, https://doi.org/10.1016/j.bpj.2021.09.021

2020

  • Yin, H., Zhen, L.-Q., Fang, W., Lai, Y.-H., Porenta, N., Goubert, G., Zhang, H., Su, H.-Sh., Ren, B., Richardson, J.O., Li, J.-F., Zenobi, R., Nanometre-Scale Spectroscopic Visualization of Catalytic Sites During a Hydrogenation Reaction on a Pd/Au Bimetallic Catalyst, Nat. Catal., 3, (2020), 834-842, https://doi.org/10.1038/s41929-020-00511-y

2019

  • Grimmel, S.A., Reiher, M., The Electrostatic Potential as a Descriptor for the Protonation Propensity in Automated Exploration of Reaction Mechanisms, Faraday Discuss., 2019, (2019), 443-463, https://doi.org/10.1039/c9fd00061e
  • Zheng, L.-Q., Servalli, M., Schlüter, A.D., Zenobi, R., Tip-Enhanced Raman Spectroscopy for Structural Analysis of Two-Dimensional Covalent Monolayers Synthesized on Water and on Au (111), Chem. Sci., 10, (2019), 9673-9678, https://doi.org/10.1039/C9SC03296G
  • Zheng, L.-Q., Lan, J., Gyr, L., Goubert, G., Qian, H., Aprahamian, I., Zenobi, R., Solution Phase and Surface Photoisomerization of a Hydrazone Switch with a Long Thermal Half-Life, J. Am. Chem. Soc., 141, (2019), 17637-17645, https://doi.org/10.1021/jacs.9b07057

2018

  • Zheng, L.-Q., Wang, X., Shao, F., Hegner, M., Zenobi, R., Nanoscale Chemical Imaging of Reversible Photoisomerization of an Azobenzene-Thiol Self-Assembled Monolayer by Tip-Enhanced Raman Spectroscopy, Angew. Chem., 130(4), (2018), 1037-1041, https://doi.org/10.1002/ange.201710443

2016

  • Dai, W., Shao, F., Szczerbiński, J., McCaffrey, R., Zenobi, R., Jin, Y., Schlüter, A.D., Zhang, W., Synthesis of a Two-Dimensional Covalent Organic Monolayer through Dynamic Imine Chemistry at the Air/Water Interface, Angew. Chem., 128(1), (2016), 221-225, https://doi.org/10.1002/ange.201508473

2013

2012

  • Eshet, H., Khaliullin, R.Z., Kühne, Th.D., Behler, J., Parrinello, M., Microscopic Origins of the Anomalous Melting Behavior of Sodium under High Pressure, Phys. Rev. Lett., 108, 115701, (2012), https://doi.org/10.1103/PhysRevLett.108.115701
  • Hassanali, A., Cuny, J., Ceriotti, M., Pickard, Ch.J., Parrinello, M., The Fuzzy Quantum Proton in the Hydrogen Chloride Hydrates, J. Am. Chem. Soc., 134, (2012), 8557-8569, https://doi.org/10.1021/ja3014727

2011

  • Khaliullin, R.Z., Eshet, H., Kühne, Th.D., Behler, J., Parrinello, M., Nucleation Mechanism for the Direct Graphite-To-Diamond Phase Transition, Nat. Mater., 10, (2011), 693-697, https://doi.org/10.1038/nmat3078
  • Prakash, M.K., Barducci, A., Parrinello, M., Replica Temperatures for Uniform Exchange and Efficient Roundtrip Times in Explicit Solvent Parallel Tempering Simulations, J. Chem. Theory Comput., 7(7), (2011), 2025-2027, https://doi.org/10.1021/ct200208h

2011

  • Mischo, B., Burdet, A., Abhari, R.S., Influence of Stator-Rotor Interaction on the Aerothermal Performance of Recess Blade Tips, J. Turbomach., 133(1), 011023, (2011), https://doi.org/10.1115/1.4001134
  • Schaefer, J.F., Boschi, L., Kissling, E., Adaptively Parametrized Surface Wave Tomography: Methodology and a New Model of the European Upper Mantle, Geophys. J. Int., 186, (2011), 1431-1453, https://doi.org/10.1111/j.1365-246X.2011.05135.x

2010

  • Awile, O., Demirel, Ö., Sbalzarini, I.F., Toward an Object-Oriented Core of the PPM Library, AIP Conf. Proc., 1281, 1313, (2010), https://doi.org/10.1063/1.3497957
  • Khaliullin, R.Z., Eshet, H., Kühne, Th.D., Behler, J., Parrinello, M., Graphite-Diamond Phase Coexistence Study Employing a Neural-Network Mapping of the Ab Initio Potential Energy Surface, Phys. Rev. B, 81, 100103(R), (2010), https://doi.org/10.1103/PhysRevB.81.100103

2008

Theses referencing HPC clusters or the HPC team

Euler

PhD theses

  • Bieri, Philipp, 2017, Unique Architectural and Evolutionary Features of the Mammalian Mitochondrial and the Plant Chloroplast Ribosome Revealed by Cryo-Electron Microscopy, https://doi.org/10.3929/ethz-b-000202600
  • Herrmann, Markus, 2019, Contributions to the Risk Assessment of Natural and Induced Seismicity Producing High-Resolution Catalogs and Improving Risk-Based Decision-Making, https://doi.org/10.3929/ethz-b-000370375
  • Hofer, Gregor, 2019, The two-dimensional polymerization mechanism of an anthracene-based monomer: A single-crystal-to-single-crystal transformation investigated via total X-ray scattering, https://doi.org/10.3929/ethz-b-000371011
  • Zhong, Xin, 2017, Numerical modelling of grainscale pressure variations in metamorphic rocks: interplay between mineral reactions, diffusion and mechanical deformation, https://doi.org/10.3929/ethz-b-000224597

Master theses

  • Haagmans, Vincent, 2021, Modelling the significance of snow-vegetation interactions for active layer dynamics in an Arctic permafrost region subjected to tundra shrubification, https://doi.org/10.3929/ethz-b-000518127

Bachelor theses

Leonhard Med 1.0

Master theses

Bachelor theses

  • Rüegsegger, Nicola Elias, 2021, Weaning of Mechanically Ventilated Patients in the Intensive Care Unit: A Clinician-in-the-Loop Reinforcement Learning Approach, https://doi.org/10.3929/ethz-b-000473932

Leonhard Open

PhD theses

Master theses

Bachelor theses

Brutus

PhD theses

  • Grommek, Andreas, 2012, Polymorphism in the ccβ model amyloid investigated by solid-state NMR and prediction of carbon chemical shifts of proteins by DFT calculations, https://doi.org/10.3929/ethz-a-007558057
  • Kunz, Anna-Pitschna E., 2011, Refinement of Molecular Simulation methodology: Development of Polarisable Solvents and Techniques to Enhance configurational Sampling, https://doi.org/10.3929/ethz-a-6618381
  • Lövenich, Sandra Nicola, 2009, Improvements to the annotation of protein-coding genes in Drosophila melanogaster based on peptide sequences derived from high-throughput tandem mass spectrometry, https://doi.org/10.3929/ethz-a-005905851
  • Semenov, Alexey, 2011, Global 3-D imaging of mantle electrical conductivity based on inversion of observatory Cresponses an approach, data analysis and results, https://doi.org/10.3929/ethz-a-006676164
  • Zhong, Xin, 2017, Numerical modelling of grainscale pressure variations in metamorphic rocks: interplay between mineral reactions, diffusion and mechanical deformation, https://doi.org/10.3929/ethz-b-000224597

Master theses

HPC team

====PhD theses