Difference between revisions of "Job management with LSF"

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Line 43: Line 43:
 
  #BSUB -W 4:00                  # 8-hour run-time
 
  #BSUB -W 4:00                  # 8-hour run-time
 
  #BSUB -R "rusage[mem=2048]"    # 2048 MB per core
 
  #BSUB -R "rusage[mem=2048]"    # 2048 MB per core
 +
 
  source /cluster/apps/local/env2lmod.sh
 
  source /cluster/apps/local/env2lmod.sh
 
  module load gcc/6.3.0 openmpi/4.0.2 python/3.8.5
 
  module load gcc/6.3.0 openmpi/4.0.2 python/3.8.5

Revision as of 14:58, 20 January 2021

250px

Quick examples

Submit a job with a command line

$ env2lmod
$ module load gcc/6.3.0 openmpi/4.0.2 python/3.8.5
$ bsub -n 4 -W 4:00 -R "rusage[mem=2048]" "python myscript.py"

Submit with a job script

Create a job script called job_script.bsub

#!/bin/bash
#BSUB -n 4                     # 4 cores
#BSUB -W 4:00                  # 8-hour run-time
#BSUB -R "rusage[mem=2048]"    # 2048 MB per core

source /cluster/apps/local/env2lmod.sh
module load gcc/6.3.0 openmpi/4.0.2 python/3.8.5
python myscript.py

Submit the script

$ bsub < job_script.bsub

Monitor submitted jobs

Check the status of your submitted job

$ bjobs