Difference between revisions of "Sandbox Home"

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= Welcome to the Scientific Computing Wiki =
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__NOTOC__
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<table style="width: 100%;">
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=Welcome to the scientific computing wiki=
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<table style="width: 95%; border-spacing: 20px;">
 
<tr valign=top>
 
<tr valign=top>
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<td style="width: 30%; background: white; text-align: left;">
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<td style="width: 22%; text-align: left;">
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[[Image:ETH_Zurich_Euler_II_cropped.jpeg|300px]]
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=== Quick guide ===
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<div style="background: #BFE5D9;" class="button">
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[[Accessing the cluster| '''Accessing the cluster''']]
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</div>
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<div style="background: #BFE5D9;" class="button">
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[[Storage and data transfer| '''Storage and data transfer''']]
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</div>
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<div style="background: #BFE5D9;" class="button">
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[[Modules and applications | '''Modules and applications''']]
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</div>
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<div style="background: #BFE5D9;" class="button>
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[[Job management with LSF| '''Job management with LSF''' ]]
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</div>
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<div style="background: #BFE5D9;" class=button>
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[[running applications| '''Examples''']]
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</div>
 
</td>
 
</td>
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<td style="width: 40%; background: white; text-align: left;>
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<td style="width: 22%;>
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This wiki is the primary source of information for the services provided by the ID SIS HPC group. We are operating and maintaining the central HPC clusters of ETH Zurich and provide services to our scientific community. [[Getting started|Get started with the clusters!]]
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</td>
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=== Helpers and support ===
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<td style="width: 20%; background: white; text-align: center;">
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<div style="background: #b2d9eac8;" class="button">
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[https://scicomp.ethz.ch/lsf_submission_line_advisor/ '''LSF Submission Line Advisor''']
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</div>
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<div style="background: #b2d9eac8;" class="button">
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[[FAQ|'''FAQ''']]
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</div>
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<div style="background: #b2d9eac8;" class="button">
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[[Euler_applications_and_libraries|'''Applications overview''']]
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</div>
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<div style="background: #b2d9eac8;" class="button">
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[http://smartdesk.ethz.ch '''Smartdesk''']
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</div>
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<div style="background: #b2d9eac8;" class="button">
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[mailto:cluster-support@id.ethz.ch '''Cluster support''']
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</div>
 
</td>
 
</td>
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<td style="width: 42%;" valign="middle" >[[Image:NvidiaDGX1_cropped1.jpg| 500px]]</td>
 
</tr>
 
</tr>
 
</table>
 
</table>
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== News ==
 
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14 Jan 2021
 
  
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We are now introducing a new process for requesting an account for the HPC clusters of ETH. This change only affects new cluster accounts. For existing cluster accounts that have already been verified, no action needs to be taken. [[New account request process for HPC clusters|Read more...]]
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==News==
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{{:News}}
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[[News|''More...'']]
  
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== Clusters & Servers ==
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==Most recent software installations==
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{|class="wikitable" style="text-align: center; width: 45%;"
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Twenty most recent software installation on each cluster. The list is based on the last modification time of the module files.
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! style="width:20%;"|[[Euler|Euler]]
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{| style="width: 100%; text-align:left;"
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! style="width:20%;"|[[Leonhard|Leonhard Open]]
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! style="width: 50%"|Euler ('''new software stack''', [[Euler_applications_and_libraries|see complete list]]):
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! style="width:20%;"|[[Leonhard|Leonhard Med]]
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! style="width: 50%"|
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! style="width:20%;"|[[MATLAB_distributed_computing_server|MATLAB server]]
 
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! style="width:20%;"|[[CLC_genomics_server|CLC genomics server]]
 
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|-
 
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|<include nopre wikitext src="/cluster/wiki/auto/service_status/euler_status"/>
 
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|<include nopre wikitext src="/cluster/wiki/auto/service_status/leonhard_open_status"/>
 
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|<include nopre wikitext src="/cluster/wiki/auto/service_status/leonhard_med_status"/>
 
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|<include nopre wikitext src="/cluster/wiki/auto/service_status/calculus_status"/>
 
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|<include nopre wikitext src="/cluster/wiki/auto/service_status/clc_status"/>
 
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|}
 
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{|
 
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| '''Green'''
 
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|:
 
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|Service is '''fully operational'''
 
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|-
 
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|'''Orange'''
 
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|:
 
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|Service is '''partially operational''' or still in '''beta testing phase'''
 
 
|-
 
|-
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|'''Red'''
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|<include nopre wikitext src="/cluster/wiki/auto/spack_module_tables/recent/euler" />
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|:
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|<include nopre wikitext src="/cluster/wiki/auto/spack_module_tables/recent/euler2" />
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|Service is '''unavailable'''
 
 
|}
 
|}
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<include nopre wikitext src="/cluster/wiki/auto/spack_module_tables/recent/etimestamp" />

Revision as of 09:11, 19 April 2022

Welcome to the scientific computing wiki

Quick guide

Accessing the cluster

Storage and data transfer

Modules and applications

Job management with LSF

Examples

Helpers and support

LSF Submission Line Advisor

FAQ

Applications overview

Smartdesk

Cluster support

NvidiaDGX1 cropped1.jpg

News

  • 23 Aug 2023 — Best Practices:
    Some recommendations on how to use the cluster most efficiently, which will reduce the stress on the system and speedup your throughput of jobs by improving your workflow.
  • 13 Jun 2023 — Cloud Service for Jupyterhub, RStudio and VSCode on Euler:
    We provide several cloud services through Jupyterhub, which allow to run Jupyter, RStudio and VSCode directly on Euler
  • 05 Aug 2022 — Transition from LSF to Slurm:
    Due to the significant increase in license cost over the past years, we will transition from IBM LSF to Slurm. Please check our LSF to Slurm quick reference.
  • 18 Mar 2022 — Using MPI on Euler:
    For running MPI jobs on Euler some configuration settings are required, which are documented on this wiki page.
  • 17 Feb 2022 — List of publications that mention the HPC clusters of ETH:
    On our scicomp wiki, we added a list of publications that reference the HPC clusters of ETH. If you mention the Euler cluster in your publication, then please let us know and we will add your publication to the list


More...

Most recent software installations

Twenty most recent software installation on each cluster. The list is based on the last modification time of the module files.

Euler (new software stack, see complete list):
trapproto/3.4.3 (gcc 11.4.0)
libxpresent/1.0.0 (gcc 11.4.0)
libxevie/1.0.3 (gcc 11.4.0)
evieext/1.1.1 (gcc 11.4.0)
bigreqsproto/1.1.2 (gcc 11.4.0)
fonttosfnt/1.2.2 (gcc 11.4.0)
dbus/1.13.6 (gcc 11.4.0)
libxxf86vm/1.1.4 (gcc 11.4.0)
libxres/1.0.7 (gcc 11.4.0)
libxcursor/1.2.1 (gcc 11.4.0)
libxtst/1.2.2 (gcc 11.4.0)
libxcomposite/0.4.6 (gcc 11.4.0)
xf86vidmodeproto/2.3.1 (gcc 11.4.0)
scrnsaverproto/1.2.2 (gcc 11.4.0)
recordproto/1.14.2 (gcc 11.4.0)
dmxproto/2.3.1 (gcc 11.4.0)
compositeproto/0.4.2 (gcc 11.4.0)
cairo/1.17.4 (gcc 11.4.0)
cairo/1.17.2 (gcc 11.4.0)
fontconfig/2.14.2 (gcc 11.4.0)

gperf/3.1 (gcc 11.4.0)
font-util/1.4.0 (gcc 11.4.0)
glib/2.76.4 (gcc 11.4.0)
xcb-util-keysyms/0.4.1 (gcc 11.4.0)
xcb-util-errors/1.0.1 (gcc 11.4.0)
xcb-util-cursor/0.1.4 (gcc 11.4.0)
xcb-util-image/0.4.1 (gcc 11.4.0)
xcb-util/0.4.1 (gcc 11.4.0)
xcb-util-wm/0.4.2 (gcc 11.4.0)
libxkbcommon/0.8.2 (gcc 11.4.0)
xkbdata/1.0.1 (gcc 11.4.0)
xkbcomp/1.4.4 (gcc 11.4.0)
googletest/1.12.1 (gcc 11.4.0)
libxp/1.0.3 (gcc 11.4.0)
printproto/1.0.5 (gcc 11.4.0)
libxi/1.7.7 (gcc 11.4.0)
swig/4.1.1 (gcc 11.4.0)
tmux/3.3a (gcc 11.4.0)
sparsehash/2.0.4 (gcc 11.4.0)
xhost/1.0.9 (gcc 11.4.0)

List of recently installed software has been updated on Fri Sep 29 10:08:29 CEST 2023

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