Difference between revisions of "Sandbox User documentation"

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[[running applications|Examples]]
 
[[running applications|Examples]]
 
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<table style="width: 90%">
 
<table style="width: 90%">
 
<tr valign=top>
 
<tr valign=top>
<td style="width: 40%; background: white;">
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<td style="width: 33%; background: white;">
 +
=== User guide ===
 +
* Accessing the clusters
 +
* Data management
 +
* Setting up your environment
 +
* Using the batch system
 +
* Applications
 +
</td>
 +
<td style="width: 33%; background: white;">
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=== Parallel computing ===
 +
* [[Parallel_computing|Parallel computing]]
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* [[Hybrid_jobs|Hybrid (MPI+OpenMP) jobs]]
 +
* [[GNU Parallel]]
 +
* [[Node allocation for parallel jobs]]
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</td>
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<td style="width: 33%; background: white;">
 
=== [[Getting_started_with_GPUs|Using GPUs]] ===
 
=== [[Getting_started_with_GPUs|Using GPUs]] ===
</td>
 
<td style="width: 40%; background: white;">
 
=== New to Linux ===
 
* [[Linux_command_line|Bash and Linux commands]]
 
* [[Linux_permissions|Linux permissions]]
 
 
</td>
 
</td>
 
</tr>
 
</tr>
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<table style="width: 90%">
 
<table style="width: 90%">
 
<tr valign=top>
 
<tr valign=top>
<td style="width: 40%; background: white;">
+
<td style="width: 33%; background: white;">
=== Parallel computing ===
+
=== New to Linux ===
* [[Parallel_computing|Parallel computing]]
+
* [[Linux_command_line|Bash and Linux commands]]
* [[Hybrid_jobs|Hybrid (MPI+OpenMP) jobs]]
+
* [[Linux_permissions|Linux permissions]]
* [[GNU Parallel]]
 
* [[Node allocation for parallel jobs]]
 
 
</td>
 
</td>
<td style="width: 40%; background: white;">
+
<td style="width: 33%; background: white;">
 
=== Software development ===
 
=== Software development ===
 
* [[Compiling_an_application|Compiling an application]]
 
* [[Compiling_an_application|Compiling an application]]
 
* [[Profiling_your_binary|Profiling your binary]]
 
* [[Profiling_your_binary|Profiling your binary]]
 
* [[Debugging_your_code|Debugging your code]]
 
* [[Debugging_your_code|Debugging your code]]
 +
</td>
 +
<td style="width: 33%; background: white;">
 +
=== For software maintainers ===
 +
* [[Setting_up_a_software_stack_for_research_group|Setting up a software stack for a research group]]
 +
* [[Creating_local_module_directory|Creating a local module directory]]
 +
* [[Unpacking_RPM_packages|Unpacking RPM packages in users space]]
 
</td>
 
</td>
 
</tr>
 
</tr>
 
</table>
 
</table>
  
== For IT Support Groups (ISG) ==
+
<table style="width: 90%">
 +
<tr valign=top>
 +
<td style="width: 33%; background: white;">
 +
</td>
 +
<td style="width: 33%; background: white;">
 +
=== CLC genomics service ===
 +
* [[Using_the_CLC_genomics_service|Using the CLC genomics service]]
 +
* [[NCBI_BLAST_databases|NCBI BLAST Databases]]
 +
* [[Reference_genomes|Reference genomes]]
 +
</td>
 +
<td style="width: 33%; background: white;">
 +
=== For IT Support Groups (ISG) ===
 
* [[Managing_ETH_groups|Setting up a custom ETH group for a cluster shareholder]]
 
* [[Managing_ETH_groups|Setting up a custom ETH group for a cluster shareholder]]
 
* [[Exporting an NFS file system to Euler]]
 
* [[Exporting an NFS file system to Euler]]
 
* [[Cluster IP ranges]]
 
* [[Cluster IP ranges]]
 +
</td>
 +
</tr>
 +
</table>

Revision as of 09:52, 27 January 2021

Getting started with clusters

250px

Topics

User guide

  • Accessing the clusters
  • Data management
  • Setting up your environment
  • Using the batch system
  • Applications

Parallel computing

Using GPUs

New to Linux

Software development

For software maintainers

CLC genomics service

For IT Support Groups (ISG)