Sandbox User documentation

Getting started with clusters

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Accessing the clusters Storage and data transfer Modules and applications Batch system Software tutorials

Topics

User guide Accessing the clusters Data management Setting up your environment Using the batch system Applications

Parallel computing Parallel computing Hybrid (MPI+OpenMP) jobs GNU Parallel Node allocation for parallel jobs

Using GPUs

New to Linux Bash and Linux commands Linux permissions

Software development Compiling an application Profiling your binary Debugging your code

For software maintainers Setting up a software stack for a research group Creating a local module directory Unpacking RPM packages in users space

CLC genomics service Using the CLC genomics service NCBI BLAST Databases Reference genomes

For IT Support Groups (ISG) Setting up a custom ETH group for a cluster shareholder Exporting an NFS file system to Euler Cluster IP ranges