Difference between revisions of "Tutorials"
From ScientificComputing
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===Reference data=== | ===Reference data=== | ||
| − | * [[NCBI BLAST | + | * [[NCBI_BLAST_databases|NCBI BLAST Databases]] |
| − | * [[Reference genomes | + | * [[Reference_genomes|Reference genomes]] |
==For software maintainers== | ==For software maintainers== | ||
Revision as of 08:44, 21 July 2020
Contents
For new users
Linux tutorials
Cluster tutorials
- Getting started with ETH clusters
- Getting started with GPUs (Leonhard)
- Compiling an application
- LSF submission line advisor
- Parallel computing
For advanced users
Debugging and profiling
Batch system
- LSF mini reference
- Job chaining (dependency conditions)
- Job arrays
- Hybrid (MPI+OpenMP) jobs
- GNU Parallel
- Node allocation for parallel jobs
- Working in multiple shareholder groups
Storage
- Too much space is used by your output files
- Using the local scratch
- Best practices guide for Lustre file system
Reference data
For software maintainers
- Setting up a software stack for a research group
- Creating a local module directory
- Unpacking RPM packages in users space
For IT Support Groups (ISG)
- Setting up a custom ETH group for a cluster shareholder
- Exporting an NFS file system to Euler
- Cluster IP ranges
Software tutorials
Centrally installed applications
- Turbomole
- Comsol MATLAB LiveLink
- Comsol files in the home directory
- Using Gaussian on Euler
- Using MATLAB's Parallel Computing Toolkit
