FALCON

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Category

Bioinformatics, Aligner

Description

Falcon: a set of tools for fast aligning long reads for consensus and assembly. The Falcon tool kit is a set of simple code collection which I use for studying efficient assembly algorithm for haploid and diploid genomes. It has some back-end code implemented in C for speed and some simple front-end written in Python for convenience.

Available versions

Legacy versions Supported versions New versions
0.5.0

Environment modules

Version Module load command Additional modules loaded automatically
0.5.0 module load gcc/4.8.2 python/2.7.6 falcon/0.5.0 openblas/0.2.13_seq

License information

https://github.com/PacificBiosciences/FALCON-integrate

Links

https://github.com/PacificBiosciences/FALCON-integrate